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Pull requests: galaxyproject/tools-iuc

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Pull requests list

Update table compute - Change rangemaker logic to allow pandas like indexing
#7105 opened Jun 30, 2025 by paulzierep Loading…
3 of 5 tasks
1
2
Add missing if condition to scoary.xml
#7103 opened Jun 30, 2025 by RZ9082 Loading…
2 of 5 tasks
2
Updating tools/ucsc_tools/ucsc_nettoaxt from version 469 to 482
#7102 opened Jun 30, 2025 by gxydevbot Loading…
Updating tools/ucsc_tools/maftoaxt from version 469 to 482
#7092 opened Jun 30, 2025 by gxydevbot Loading…
Updating tools/tesseract from version 5.0.0 to 5.5.0
#7090 opened Jun 30, 2025 by gxydevbot Loading…
Updating tools/crossmap from version 0.7.0 to 0.7.3
#7089 opened Jun 30, 2025 by gxydevbot Loading…
fix Scoary without tree option
#7087 opened Jun 29, 2025 by bgruening Loading…
5 tasks
un-quotes the region list so chr1 chr2 will not be passed as an inval…
#7086 opened Jun 28, 2025 by bwlang Loading…
2 of 5 tasks
Add genome_uploader
#7084 opened Jun 27, 2025 by SantaMcCloud Loading…
3 of 5 tasks
1
Adding DiffDock
#7082 opened Jun 27, 2025 by RZ9082 • Draft
3 of 5 tasks
5
Add new tool: mapDamage
#7081 opened Jun 27, 2025 by thaulagnon Loading…
3 of 5 tasks
4
Update snapatac2 to version 2.8.0
#7078 opened Jun 26, 2025 by nilchia • Draft
3 of 5 tasks
1
Upgrade samtools dependencies
#7068 opened Jun 20, 2025 by bwlang Loading…
3 of 5 tasks
2
New tool: PhyloPhlAn an integrated pipeline for phylogenetic profiling of genomes and metagenomes
#7067 opened Jun 19, 2025 by neo417 • Draft
3 of 5 tasks
kraken2: fix linter and remove unpaired paired input
#7062 opened Jun 17, 2025 by bernt-matthias • Draft
3 of 7 tasks
add: gotree reformat
#7052 opened Jun 15, 2025 by ammaraziz Loading…
3 of 5 tasks
46
STARSolo add --outBAMsortingBinsN an add a param to force samtools sort
#7051 opened Jun 13, 2025 by pavanvidem Loading…
2
[WIP] added blastfilter script
#7048 opened Jun 13, 2025 by Deeptivarshney • Draft
3 of 5 tasks
4
New tool Addition: Chopper a tool for fast processing (filtering, trimming, ..) of long reads
#7046 opened Jun 12, 2025 by lsterck Loading…
3 of 5 tasks
24
Updating tools/metaphlan from version 4.1.1 to 4.2.2
#7038 opened Jun 9, 2025 by gxydevbot Loading…
3
new tool: galaxy wrappers for the pcdl physicell data lader command line commands
#7034 opened Jun 8, 2025 by elmbeech Loading…
52
Update fastplong wrapper
#7033 opened Jun 5, 2025 by lsterck Loading…
2 of 5 tasks
10
WIP: Update tb_profiler_profile to version 6.6.3
#7031 opened Jun 5, 2025 by pvanheus Loading…
3 of 5 tasks
1
[WIP]: Add Panta
#7029 opened Jun 4, 2025 by FMG0411 • Draft
3 of 5 tasks
21
Update version of humann DM
#7027 opened Jun 3, 2025 by paulzierep Loading…
3 of 5 tasks
2
ProTip! Exclude everything labeled bug with -label:bug.