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abr protocols for liquid-classes and LLD in v8.4.0 #17997
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abr protocols for liquid-classes and LLD in v8.4.0 #17997
andySigler
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This PR adds the ability to generate python for quick transfer behind a feature flag. It also logs it in devtools so you can view the actual python file, otherwise there is no other way to view the file.
…nds (#17881) # Overview We want to enable error recovery during a protocol if the Flex Stacker shuttle is not detected. This PR does the first step, which is to catch this error. The hardware controller layer now checks for the platform status before executing dispense and store labware, and raises the appropriate error. closes EXEC-1287, EXEC-1200
…o stall obstruction (#17773)
…with liquid (#17818) <!-- Thanks for taking the time to open a Pull Request (PR)! Please make sure you've read the "Opening Pull Requests" section of our Contributing Guide: https://github.com/Opentrons/opentrons/blob/edge/CONTRIBUTING.md#opening-pull-requests GitHub provides robust markdown to format your PR. Links, diagrams, pictures, and videos along with text formatting make it possible to create a rich and informative PR. For more information on GitHub markdown, see: https://docs.github.com/en/get-started/writing-on-github/getting-started-with-writing-and-formatting-on-github/basic-writing-and-formatting-syntax To ensure your code is reviewed quickly and thoroughly, please fill out the sections below to the best of your ability! --> # Overview Removing instances where tips were returning with liquid in them ## Test Plan and Hands on Testing Ran protocols and checked tip rack bases upon completion to ensure they were empty. ## Changelog <!-- List changes introduced by this PR considering future developers and the end user. Give careful thought and clear documentation to breaking changes. --> ## Review requests <!-- - What do you need from reviewers to feel confident this PR is ready to merge? - Ask questions. --> ## Risk assessment <!-- - Indicate the level of attention this PR needs. - Provide context to guide reviewers. - Discuss trade-offs, coupling, and side effects. - Look for the possibility, even if you think it's small, that your change may affect some other part of the system. - For instance, changing return tip behavior may also change the behavior of labware calibration. - How do your unit tests and on hands on testing mitigate this PR's risks and the risk of future regressions? - Especially in high risk PRs, explain how you know your testing is enough. -->
…17899) <!-- Thanks for taking the time to open a Pull Request (PR)! Please make sure you've read the "Opening Pull Requests" section of our Contributing Guide: https://github.com/Opentrons/opentrons/blob/edge/CONTRIBUTING.md#opening-pull-requests GitHub provides robust markdown to format your PR. Links, diagrams, pictures, and videos along with text formatting make it possible to create a rich and informative PR. For more information on GitHub markdown, see: https://docs.github.com/en/get-started/writing-on-github/getting-started-with-writing-and-formatting-on-github/basic-writing-and-formatting-syntax To ensure your code is reviewed quickly and thoroughly, please fill out the sections below to the best of your ability! --> # Overview DVT Flex Stacker Accelerated Lifetime Test ## Test Plan and Hands on Testing Ran in SZ ## Changelog <!-- List changes introduced by this PR considering future developers and the end user. Give careful thought and clear documentation to breaking changes. --> ## Review requests <!-- - What do you need from reviewers to feel confident this PR is ready to merge? - Ask questions. --> ## Risk assessment <!-- - Indicate the level of attention this PR needs. - Provide context to guide reviewers. - Discuss trade-offs, coupling, and side effects. - Look for the possibility, even if you think it's small, that your change may affect some other part of the system. - For instance, changing return tip behavior may also change the behavior of labware calibration. - How do your unit tests and on hands on testing mitigate this PR's risks and the risk of future regressions? - Especially in high risk PRs, explain how you know your testing is enough. -->
…ime Test (#17898) <!-- Thanks for taking the time to open a Pull Request (PR)! Please make sure you've read the "Opening Pull Requests" section of our Contributing Guide: https://github.com/Opentrons/opentrons/blob/edge/CONTRIBUTING.md#opening-pull-requests GitHub provides robust markdown to format your PR. Links, diagrams, pictures, and videos along with text formatting make it possible to create a rich and informative PR. For more information on GitHub markdown, see: https://docs.github.com/en/get-started/writing-on-github/getting-started-with-writing-and-formatting-on-github/basic-writing-and-formatting-syntax To ensure your code is reviewed quickly and thoroughly, please fill out the sections below to the best of your ability! --> # Overview DVT Flex Stacker Labware Compatibility Lifetime Test ## Test Plan and Hands on Testing - Ran in SZ ## Changelog <!-- List changes introduced by this PR considering future developers and the end user. Give careful thought and clear documentation to breaking changes. --> ## Review requests <!-- - What do you need from reviewers to feel confident this PR is ready to merge? - Ask questions. --> ## Risk assessment <!-- - Indicate the level of attention this PR needs. - Provide context to guide reviewers. - Discuss trade-offs, coupling, and side effects. - Look for the possibility, even if you think it's small, that your change may affect some other part of the system. - For instance, changing return tip behavior may also change the behavior of labware calibration. - How do your unit tests and on hands on testing mitigate this PR's risks and the risk of future regressions? - Especially in high risk PRs, explain how you know your testing is enough. --> --------- Co-authored-by: Carlos <fernandez.carlos40@gmail.com>
…uipment up in invariantContext (#17865) Pretty big refactor with step-generation in particular (but also touched a few files in PD and the app for quick transfer) where the `invariantContext` type key `additionalEquipmentEntities` is split up to 4 separate keys. The total `InvariantContext` looks like this: ``` export interface InvariantContext { labwareEntities: LabwareEntities moduleEntities: ModuleEntities pipetteEntities: PipetteEntities wasteChuteEntities: WasteChuteEntities trashBinEntities: TrashBinEntities stagingAreaEntities: StagingAreaEntities gripperEntities: GripperEntities liquidEntities: LiquidEntities config: Config }
… errors & warnings (#17893)
…Props (#17843) This PR utilizes the existing `propsForFields` structure to pass all necessary fields to `CheckboxExpandStepFormField` for the implicated checkbox stepform field. Instead of individually passing values for the field props `value`, `updateValue`, `isChecked`, `tooltipText`, and `disabled`, we can simply pass that field's `propsForFields`, and destructure inside the checkbox expand component.
Covers EXEC-1266 Updates the Max pool limit to accounts for the overlap of the last labware within a given pool over the first.
<!-- Thanks for taking the time to open a Pull Request (PR)! Please make sure you've read the "Opening Pull Requests" section of our Contributing Guide: https://github.com/Opentrons/opentrons/blob/edge/CONTRIBUTING.md#opening-pull-requests GitHub provides robust markdown to format your PR. Links, diagrams, pictures, and videos along with text formatting make it possible to create a rich and informative PR. For more information on GitHub markdown, see: https://docs.github.com/en/get-started/writing-on-github/getting-started-with-writing-and-formatting-on-github/basic-writing-and-formatting-syntax To ensure your code is reviewed quickly and thoroughly, please fill out the sections below to the best of your ability! --> # Overview Multi purpose tip pick up test ## Test Plan and Hands on Testing <!-- Describe your testing of the PR. Emphasize testing not reflected in the code. Attach protocols, logs, screenshots and any other assets that support your testing. --> ## Changelog - Protocol for tip pick up test - Parameter creator for all deck slots - Removed old evaporation protocol ## Review requests <!-- - What do you need from reviewers to feel confident this PR is ready to merge? - Ask questions. --> ## Risk assessment <!-- - Indicate the level of attention this PR needs. - Provide context to guide reviewers. - Discuss trade-offs, coupling, and side effects. - Look for the possibility, even if you think it's small, that your change may affect some other part of the system. - For instance, changing return tip behavior may also change the behavior of labware calibration. - How do your unit tests and on hands on testing mitigate this PR's risks and the risk of future regressions? - Especially in high risk PRs, explain how you know your testing is enough. -->
… script for Shenzhen. (#17916)
Covers: EXEC-1350 Implementation and test cases for a new unsafe command, Manual Stacker Retrieve.
…rrors (#17905) This PR introduces a new error handling mechanism for detecting labware presence on the Flex Stacker shuttle. ### Shuttle Labware Detection Error: * Added a new error type `FlexStackerShuttleLabwareDetectionFailedError` in shared-data to handle cases where labware detection on the shuttle fails * Updated the error definitions to include the new error code `3021` * Implemented the `verify_shuttle_labware_presence` method to check for labware presence on the shuttle using a placeholder for TOF sensor data, and used it in the `dispense_labware` ### Hopper Labware Detection Error: * Added a new error type `FlexStackerHopperLabwareDetectionFailedError` in shared-data to handle cases where labware detection in the hopper fails * Updated the error definitions to include the new error code `3022` * Implemented the `verify_hopper_labware_presence` method to check for hopper labware in the engine `retrieve` command to make sure we're raising the error properly
This PR wires up the conditioning volume field for multiDispense move liquid steps. It also enforces the maximum allowed conditioning volume based on pipette specs, transfer volume, and disposal volume configured. The logic for determining the max conditioning volume is as follows: - determine max working volume for that pipette based on whether low volume mode is active - determine max tip volume based on tiprack assigned for that step - take the minimum of the above two calculations to determine the max effective working volume - from this number, subtract the transfer volume (need to accommodate at least one destination-worth) and the disposal volume Closes AUTH-912
* refactor(components): modify Tag component code structure
<!-- Thanks for taking the time to open a Pull Request (PR)! Please make sure you've read the "Opening Pull Requests" section of our Contributing Guide: https://github.com/Opentrons/opentrons/blob/edge/CONTRIBUTING.md#opening-pull-requests GitHub provides robust markdown to format your PR. Links, diagrams, pictures, and videos along with text formatting make it possible to create a rich and informative PR. For more information on GitHub markdown, see: https://docs.github.com/en/get-started/writing-on-github/getting-started-with-writing-and-formatting-on-github/basic-writing-and-formatting-syntax To ensure your code is reviewed quickly and thoroughly, please fill out the sections below to the best of your ability! --> # Overview Support for runtime parameters Updated prompt and added examples Closes: AUTH-1636 <!-- Describe your PR at a high level. State acceptance criteria and how this PR fits into other work. Link issues, PRs, and other relevant resources. --> ## Test Plan and Hands on Testing Run the app and request to add runtime parameters. <!-- Describe your testing of the PR. Emphasize testing not reflected in the code. Attach protocols, logs, screenshots and any other assets that support your testing. --> ## Changelog - Enhanced prompts to account for runtime parameters - Added runtime parameters examples <!-- List changes introduced by this PR considering future developers and the end user. Give careful thought and clear documentation to breaking changes. --> ## Review requests Run the app and request to add runtime parameters. You may add something like below to Description field: `a simple reagent transfer with runtime parameters` <!-- - What do you need from reviewers to feel confident this PR is ready to merge? - Ask questions. --> ## Risk assessment Low <!-- - Indicate the level of attention this PR needs. - Provide context to guide reviewers. - Discuss trade-offs, coupling, and side effects. - Look for the possibility, even if you think it's small, that your change may affect some other part of the system. - For instance, changing return tip behavior may also change the behavior of labware calibration. - How do your unit tests and on hands on testing mitigate this PR's risks and the risk of future regressions? - Especially in high risk PRs, explain how you know your testing is enough. -->
* feat(protocol-designer): add liquid classes button as step 2
Merge chore_release-8.4.0 mergeback branch into edge Co-authored-by: Josh McVey <josh.mcvey@opentrons.com> Co-authored-by: Jamey Huffnagle <jamey.huffnagle@opentrons.com> Co-authored-by: Ryan Howard <ryan.howard@opentrons.com> Co-authored-by: Sanniti Pimpley <sanni-t@users.noreply.github.com> Co-authored-by: Andy Sigler <andrewsigler1@gmail.com> Co-authored-by: Seth Foster <seth@opentrons.com> Co-authored-by: emilyburghardt <emily.burghardt@opentrons.com> Co-authored-by: Max Marrone <max@opentrons.com> Co-authored-by: Jeremy Leon <jeremy.leon@opentrons.com>
… mix forms (#17922) re AUTH-982 <!-- Thanks for taking the time to open a Pull Request (PR)! Please make sure you've read the "Opening Pull Requests" section of our Contributing Guide: https://github.com/Opentrons/opentrons/blob/edge/CONTRIBUTING.md#opening-pull-requests GitHub provides robust markdown to format your PR. Links, diagrams, pictures, and videos along with text formatting make it possible to create a rich and informative PR. For more information on GitHub markdown, see: https://docs.github.com/en/get-started/writing-on-github/getting-started-with-writing-and-formatting-on-github/basic-writing-and-formatting-syntax To ensure your code is reviewed quickly and thoroughly, please fill out the sections below to the best of your ability! --> # Overview <!-- Describe your PR at a high level. State acceptance criteria and how this PR fits into other work. Link issues, PRs, and other relevant resources. --> This PR adds only the UI for the reset aspirate/dispense settings button to the transfer and mix step forms. The functionality for resetting form fields to their default values will be implemented separately. design: https://www.figma.com/design/RcHb9UdygVtyXcvDcDmnTP/Feature%3A-Liquid-Classes?node-id=2997-115587&t=7jgREckiWjAkfOmo-4 ## Test Plan and Hands on Testing <!-- Describe your testing of the PR. Emphasize testing not reflected in the code. Attach protocols, logs, screenshots and any other assets that support your testing. --> -Create or import a protocol and enable the Liquid Classes feature flag in the settings. -Add a transfer step and verify that a reset button appears at the end of both the aspirate and dispense settings. -Clicking the reset button should scroll the view to the top. -Verify the reset button on the mix step form as well. ## Changelog <!-- List changes introduced by this PR considering future developers and the end user. Give careful thought and clear documentation to breaking changes. --> -Created the `ResetSettingsField` component to display the reset button. -Currently, the reset button's `onClick` action only scrolls the view to the top of the form. -Added test ## Review requests <!-- - What do you need from reviewers to feel confident this PR is ready to merge? - Ask questions. --> ## Risk assessment <!-- - Indicate the level of attention this PR needs. - Provide context to guide reviewers. - Discuss trade-offs, coupling, and side effects. - Look for the possibility, even if you think it's small, that your change may affect some other part of the system. - For instance, changing return tip behavior may also change the behavior of labware calibration. - How do your unit tests and on hands on testing mitigate this PR's risks and the risk of future regressions? - Especially in high risk PRs, explain how you know your testing is enough. --> --------- Co-authored-by: shiyaochen <shiyaochen@sys-macbook-pro.mynetworksettings.com> Co-authored-by: shiyaochen <shiyaochen@sys-MacBook-Pro.local>
<!-- Thanks for taking the time to open a Pull Request (PR)! Please make sure you've read the "Opening Pull Requests" section of our Contributing Guide: https://github.com/Opentrons/opentrons/blob/edge/CONTRIBUTING.md#opening-pull-requests GitHub provides robust markdown to format your PR. Links, diagrams, pictures, and videos along with text formatting make it possible to create a rich and informative PR. For more information on GitHub markdown, see: https://docs.github.com/en/get-started/writing-on-github/getting-started-with-writing-and-formatting-on-github/basic-writing-and-formatting-syntax To ensure your code is reviewed quickly and thoroughly, please fill out the sections below to the best of your ability! --> # Overview PD 8.5 alpha release notes. Includes liquid class details and several [8.5 bug fixes and enhancements ](https://opentrons.atlassian.net/browse/AUTH-1414). <!-- Describe your PR at a high level. State acceptance criteria and how this PR fits into other work. Link issues, PRs, and other relevant resources. --> ## Test Plan and Hands on Testing <!-- Describe your testing of the PR. Emphasize testing not reflected in the code. Attach protocols, logs, screenshots and any other assets that support your testing. --> ## Changelog <!-- List changes introduced by this PR considering future developers and the end user. Give careful thought and clear documentation to breaking changes. --> - overall description of liquid classes in PD - added quick and dirty description of how users use liquid classes in PD (to be beefed up in a PD manual revision) - described some advanced settings users will be able to edit with liquid class changes - added some bug fixes and enhancements to improved features/bug fixes ## Review requests <!-- - What do you need from reviewers to feel confident this PR is ready to merge? - Ask questions. --> Anything missing that I should be sure to add in stable release notes? Any changes to formatting I need to make so this works for the modal? How does formatting work for the modal- I noticed it might include an "app changes" header? ## Risk assessment <!-- - Indicate the level of attention this PR needs. - Provide context to guide reviewers. - Discuss trade-offs, coupling, and side effects. - Look for the possibility, even if you think it's small, that your change may affect some other part of the system. - For instance, changing return tip behavior may also change the behavior of labware calibration. - How do your unit tests and on hands on testing mitigate this PR's risks and the risk of future regressions? - Especially in high risk PRs, explain how you know your testing is enough. --> low.
* feat(app): add feature flag for liquid classes of qt
…ting test volumes
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Overview
2x changes:
--parameters
Argument:
--parameters
Adds a new argument (
--parameters
) to configure runtime parameters when usingopentrons.simulate
andopentrons.execute
.Example:
--parameters my_str=help my_bool=true my_int=1 my_float=1.23
Protocols
Protocols for volumetric (oh my!) testing release v8.4.0.
Located inside
opentrons/hardware-testing/hardware_testing/protocols/volumetric
, there are 3x protocols.For teams: QA, ABR, and FAS:
flex_pipette_iq_oq.py
For teams: ABR only
flex_volumetric_low_volumes.py
flex_volumetric_high_volumes.py
Test Plan and Hands on Testing
Changelog
Review requests
Risk assessment