raphael-group
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- HM-OT Public
Hidden Markov Optimal Transport: learning the sequence of latent cell-states and transitions in transcriptomic time-series.
- LAML Public
LAML is a maximum likelihood algorithm to infer cell phylogeny from dynamic lineage tracing data
- CalicoST Public
Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics
- GASTON Public
GASTON: deep learning algorithm learns "topography" of a tissue slice from spatial transcriptomics data
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