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HistoSSLscaling
HistoSSLscaling PublicCode associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., MedRxiv (2023). We publicly release Phikon 🚀
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HE2RNA_code
HE2RNA_code Public archiveTrain a model to predict gene expression from histology slides.
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- nnUNet Public Forked from MIC-DKFZ/nnUNet
Forking the nnunet repository to be able to develop and modify functionalities.
- deepdeconv-fork Public Forked from owkin/deepdeconv
Deep probabilistic analysis of single-cell omics data
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- plism-benchmark Public
Official repository for PLISM robustness benchmark of pathology foundation models (MICCAI 2025)
- cytocommunity_ofta Public Forked from huBioinfo/CytoCommunity
A spatial omics data analysis tool that enables both unsupervised and supervised discovery of complex tissue cellular neighborhoods from cell phenotypes.
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