Python toolkit for parsing, processing, and analysis of Illumina methylation array IDAT files
Methylation array preprocessing.
This package provides Illumina Mouse Methylation Array Annotation (12.v1, Genome Build mm10) compatible with minfi.
R-based DNA methylation array data analysis workflow.
Pipeline for the analysis of Illumina 450k DNA methylation data in R using the Bioconductor package minfi
This repository contains the final project of Group 4 for the DNA/RNA Dynamics course (MSc Bioinformatics, University of Bologna). It provides a full Illumina 450K methylation analysis pipeline in R, including preprocessing, quality control, normalization (Funnorm), PCA, and identification of DMPs between control (CTRL) and disease (DIS) samples.
This repository contains the project of the DNA/RNA Dynamics course of the MSc Bioinformatics at the University of Bologna. The project is about the analysis of methylation data generated from Illumina HumanMethylation450K Beadchip.
Provides easy to use, objective oriented functions for preprocessing methylation data produced by an Illumina Infinium BeadChip and detecting differentially methylated positions and regions within the DNA.
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