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Repositories
- viralrecon Public Forked from nf-core/viralrecon
Assembly and intrahost/low-frequency variant calling for viral samples
- virology_training Public
This repo contains all the resources needed to follow the virology training to analyze viral sequencing data.
- relecov-platform Public
genomic surveillance web platform for respiratory viruses used by RELECOV network in Spain
- relecov-tools Public
set of helper tools for the assembly of the different elements in the RELECOV platform (Spanish Network for genomic surveillance of SARS-Cov-2) as data download, processing, validation and upload to public databases, as well as analysis runs and database storage.
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- introduction_to_hpc Public
In this training course you will find theory and practice material for introducing yourself to the basics of high-performance computing (HPC) environment.
- iskylims Public
is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.
- flu_resistance Public
Repository containing influenza resistance data in JSON format and scripts to generate and update these files from source datasets.
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