Jupyter Notebooks and other code for 4CE data visualizations.

PCORnet Ontology to OMOP - beta!

using NAACCR tumor registry data in i2b2, PCORNet CDM

R package to manage an i2b2 instance and import data

General purpose script for looking for over and under represented EHR facts in an i2b2 patient-set. Can be used for finding healthcare outcomes disparities, comorbidities, and who knows what else. The name is a portmanteau of Chi-squared and phenotype.

The backend web service server that i2b2-client talks to. Based on an Express server and Sequelize ORM.

This collection of i2b2 plugins are based on a R package loaded in OpenCPU

CODEHR: Clinical Open Dashboard for Electronic Health Records

Github pages for Glowing Bear website

This library provides functions to import data into an I2B2 DB schema

Tools for converting PCORI CDM data to I2B2 format

i2b2 plugin and backend web applications for exporting data from the i2b2 web client

Simulation of baseline survey response variables to store information in EPIC Number of variables: 495 Code: Java 8 Reads in csv file of variables and value range of permitted responses Use randomization to a) induce error b) generate valid responses, and simulate 1M responses, to use as prototype data to populate i2b2 deployments in support of …

Redesigned i2b2 Web Client with improved data accessibility and reduced user interface complexity. Accompanies i2b2-backend. Based on React, Redux, Material-UI.

R package for RECOVER data summarization and egress with additional generally useful functions

I2B2 star schema deployed with Alembic

Code to generate derived sleep measures on a daily timescale

Patched i2b2 pm module that delegates user authentication to Eureka!