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CogStack

CogStack and related projects

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  1. CogStack-NiFi Public

    Building data processing pipelines for documents processing with NLP using Apache NiFi and related services

    Python 46 20

  2. MedCAT Public

    Medical Concept Annotation Tool

    Python 480 105

  3. MedCATtrainer Public

    A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.

    Python 79 35

  4. Foresight Public

    Deep Generative Modelling of Patient Timelines using Electronic Health Records

    Jupyter Notebook 55 8

  5. OpenGPT Public

    A framework for creating grounded instruction based datasets and training conversational domain expert Large Language Models (LLMs).

    Jupyter Notebook 350 45

Repositories

Showing 10 of 31 repositories
  • CogStack-ModelServe Public

    A model serving and governance system for CogStack NLP solutions

    Python 0 2 0 4 Updated Mar 19, 2025
  • cogstack-model-gateway Public

    A Gateway for accessing Cogstack ModelServe instances

    Python 1 Apache-2.0 0 0 0 Updated Mar 19, 2025
  • CogStack-NiFi Public

    Building data processing pipelines for documents processing with NLP using Apache NiFi and related services

    Python 46 20 0 0 Updated Mar 19, 2025
  • cogstack-jupyter-hub Public

    Custom Jupyter Hub Docker image with example notebooks

    Jupyter Notebook 2 1 0 0 Updated Mar 19, 2025
  • MedCATtrainer Public

    A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.

    Python 79 35 17 1 Updated Mar 18, 2025
  • MedCAT Public

    Medical Concept Annotation Tool

    Python 480 105 2 2 Updated Mar 18, 2025
  • working_with_cogstack Public

    Basic setup and easy to follow templates to interact and search CogStack for data analysts

    Python 11 Apache-2.0 8 0 0 Updated Mar 11, 2025
  • MedCATservice Public

    Running MedCAT as a RESTful web service

    Python 20 14 0 1 Updated Feb 26, 2025
  • ocr-service Public
    Python 4 2 0 0 Updated Feb 19, 2025
  • MedCATtutorials Public

    General tutorials for the setup and use of MedCAT.

    HTML 37 MIT 15 2 2 Updated Jan 6, 2025