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@bihealth

Berlin Institute of Health

BIH Core Unit Bioinformatics & BIH HPC IT

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  1. sodar-server Public

    SODAR: System for Omics Data Access and Retrieval

    Python 16 3

  2. sodar-core Public

    SODAR Core: A Django-based framework for building scientific data management web apps

    Python 10 1

  3. scelvis Public

    🎇 SCelVis - web-based visualization of single-cell data. ➡️ ➡️ Demo ➡️➡️

    Python 21 5

  4. digestiflow-server Public

    🍸 Web-based database system for flow cell management (incl. REST API)

    Python 15 3

  5. altamisa Public

    AltamISA: a Python API for ISA-Tab files

    Python 5 2

Repositories

Showing 10 of 178 repositories
  • dotty Public

    cdot-based transcript projections

    Python 0 MIT 0 2 0 Updated Mar 31, 2025
  • sodar-server Public

    SODAR: System for Omics Data Access and Retrieval

    Python 16 MIT 3 342 (6 issues need help) 0 Updated Mar 31, 2025
  • snappy-pipeline Public

    SNAPPY Nucleic Acid Processing in Python

    Python 10 MIT 4 117 (2 issues need help) 23 Updated Mar 31, 2025
  • cubi-tk Public

    CUBI Tooling for SODAR, VarFish et al.

    Python 5 MIT 5 44 3 Updated Mar 31, 2025
  • reev Public

    REEV: Explanation and Evaluation of Variants

    TypeScript 9 MIT 4 39 7 Updated Mar 31, 2025
  • sodar-core Public

    SODAR Core: A Django-based framework for building scientific data management web apps

    Python 10 MIT 1 265 (2 issues need help) 0 Updated Mar 28, 2025
  • nf-core-configs Public Forked from nf-core/configs

    Config files used to define parameters specific to compute environments at different Institutions

    Nextflow 0 MIT 299 0 1 Updated Mar 27, 2025
  • kiosc-server Public
    Python 1 MIT 1 28 3 Updated Mar 14, 2025
  • sodar-docker-compose Public

    Setup SODAR using Docker Compose

    Shell 3 MIT 3 14 (1 issue needs help) 1 Updated Mar 14, 2025
  • StemCNV-check Public
    R 1 MIT 0 4 0 Updated Mar 11, 2025
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