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@ctlab

Computer Technologies Laboratory

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  1. ITMO_FS Public

    Feature selection library in python

    Python 146 38

  2. GADMA Public

    Genetic Algorithm for Demographic Model Analysis

    Python 48 15

  3. LinSeed Public

    Linseed: LINear Subspace identification for gene Expresion Deconvolution

    R 29 9

  4. metafast Public

    Fast metagenome analysis toolkit

    Java 26 10

Repositories

Showing 10 of 65 repositories
  • metafx Public

    MetaFX – library for feature extraction from whole-genome metagenome sequencing data

    Shell 11 MIT 1 0 0 Updated Feb 17, 2025
  • ctlab.github.io Public
    HTML 0 0 0 0 Updated Feb 13, 2025
  • samovar Public

    Algorithms package for generating model metagenomes with specified properties

    Jupyter Notebook 5 0 2 1 Updated Jan 28, 2025
  • GADMA Public

    Genetic Algorithm for Demographic Model Analysis

    Python 48 15 9 0 Updated Nov 6, 2024
  • parallel-rearrangements Public

    parallel rearrangements caller

    Python 4 MIT 2 2 0 Updated Oct 6, 2024
  • mwcsr Public

    An R package for solving maximum-weight connected subrgaph problem and it's variants

    C++ 7 3 0 0 Updated Sep 9, 2024
  • metafast Public

    Fast metagenome analysis toolkit

    Java 26 MIT 10 0 1 Updated Sep 3, 2024
  • HiCT Public

    Combines all HiCT-related repositories as submodules

    Dockerfile 2 MIT 0 1 0 Updated Jun 26, 2024
  • HiCT_Library Public

    Library for interaction with Hi-C contact maps in HDF5 format

    Python 0 MIT 0 0 0 Updated Jun 26, 2024
  • HiCT_JVM Public

    Interactive visualizer ad manual scaffolder of Hi-C contact maps. All-in-one Java-based implementation.

    Java 1 MIT 0 7 0 Updated Jun 26, 2024
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