Multiple Imputation with LightGBM in Python

genetic variant expressions, annotation, and filtering for great good.

Pandas-aware non-linear least squares regression using Lmfit

Soundcloud Music Downloader

Calculate PEP scores for MaxQuant protein output (proteinGroups.txt).

This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions for software installs.

Feather: fast, interoperable binary data frame storage for Python, R, and more powered by Apache Arrow

ATAC-seq and DNase-seq processing pipeline

SRA Tools

A Graphic Device That Does Nothing

S language OOP ⛵️

Lovely console emulator package for Windows

Learn how to design large-scale systems. Prep for the system design interview. Includes Anki flashcards.

Persists tmux environment across system restarts.

Quality control for patch-seq data using marker genes

ascii database of pokemon... in python!

Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules

gopy generates a CPython extension module from a go package.

BTree provides a simple, ordered, in-memory data structure for Go programs.

Python music library

Bayesian haplotype-based genetic polymorphism discovery and genotyping.

Short-read sequencing tools

Electric Love Potatoes for your website!

First step moving PerlGP into a normal Perl module - only individual-based operations to start with...

Source code for evolutionary music engine to accompany forthcoming journal article

UCSC command line bioinformatic utilities

This project now lives on in a rewrite at https://gitlab.redox-os.org/redox-os/parallel

Extended pickling support for Python objects