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81 Open 621 Closed
81 Open 621 Closed
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Issues list

conda perl version causes error on arm (Graviton) bug Something isn't working
#1520 opened Mar 20, 2025 by delagoya
ERROR ~ Class definition not found: com/amazonaws/AmazonServiceException bug Something isn't working
#1519 opened Mar 19, 2025 by slives-lab
RSeQC Infer Experiment fails with --bam-csi-index enabled bug Something isn't working
#1517 opened Mar 18, 2025 by milos7250
"Local" nf-core modules without singularity container builds cause issues
#1516 opened Mar 18, 2025 by pontus
3
make trimming input reliant on fq lint output enhancement
#1514 opened Mar 17, 2025 by dmalzl
1
Extra arguments from STAR-RSEM enhancement
#1513 opened Mar 13, 2025 by cutleraging
Improvements for processing prokaryotic datasets using the nf-core/rnaseq pipeline enhancement
#1512 opened Mar 12, 2025 by sebschulz1
3
Running test profile fails bug Something isn't working
#1510 opened Mar 12, 2025 by bounlu
sortmerna "41 Illegal instruction" bug Something isn't working
#1509 opened Mar 10, 2025 by sunta3iouxos
Error: Process requirement exceeds available memory
#1507 opened Feb 17, 2025 by Lara149
1
Update StringTie to latest version enhancement
#1506 opened Feb 14, 2025 by rrdavis77
1
rnaseq workflow isn't outputing .merged.gene_counts.tsv bug Something isn't working
#1505 opened Feb 12, 2025 by diegogotex
Issue in RNA seq pipeline bug Something isn't working
#1504 opened Feb 12, 2025 by Varda06
issue while running nf core
#1502 opened Feb 5, 2025 by Varda06
1
salmon seems to remove transcripts
#1500 opened Jan 31, 2025 by jedi-bogate
Execution time of module tin.py
#1498 opened Jan 29, 2025 by reshu23
Arm profile platform should be linux/arm64 bug Something isn't working
#1497 opened Jan 29, 2025 by birnbera
1
Indexing only run does not produce all indexes when using skip_alignment option bug Something isn't working
#1494 opened Jan 23, 2025 by pmoris
File "salmon.merged.gene_counts.tsv" Contains Floating-Point Values Instead of Raw Integer Counts bug Something isn't working
#1491 opened Jan 22, 2025 by Aeget1000
2
FATAL: While making image from oci registry: while building SIF from layers: conveyor failed to get when pulling a Singularity container bug Something isn't working
#1489 opened Jan 21, 2025 by b-lac
4
No isoform-level quants from Star_Salmon Output.
#1487 opened Jan 16, 2025 by kimberzhu
1
Error for single reads during FASTQ linting preprocessing bug Something isn't working
#1483 opened Jan 8, 2025 by cchapus
3
working with gene panels or single genes (e.g., NF1) in the nf-core/rnaseq pipeline
#1472 opened Dec 18, 2024 by huma1995
1
Unify SummarizedExperiment output enhancement
#1465 opened Dec 10, 2024 by grst
@atrigila
2
ERROR Not able to pull image of ('biocontainers/bioconductor-tximeta:1.20.1--r43hdfd78af_0') bug Something isn't working
#1457 opened Nov 26, 2024 by yaya-O19
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