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@saalfeldlab

Saalfeld Lab

Popular repositories Loading

  1. n5 n5 Public

    Not HDF5

    Java 177 22

  2. paintera paintera Public

    Java 104 17

  3. stitching-spark stitching-spark Public

    Reconstruct big images from overlapping tiled images on a Spark cluster.

    Java 35 10

  4. render render Public

    Render transformed image tiles

    Java 34 33

  5. bigwarp bigwarp Public

    A tool for manual pointwise deformable registration using bigdataviewer.

    Java 27 14

  6. n5-viewer n5-viewer Public

    BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.

    Java 19 11

Repositories

Showing 10 of 106 repositories
  • hot-knife Public
    Java 4 GPL-2.0 7 1 2 Updated Mar 30, 2025
  • n5-zarr Public

    Zarr filesystem backend for N5

    Java 16 BSD-2-Clause 16 7 6 Updated Mar 28, 2025
  • saalfx Public

    SaalFX: Extensions and tools for JavaFX, extracted from Paintera

    Kotlin 1 BSD-2-Clause 2 0 1 Updated Mar 28, 2025
  • n5-imglib2 Public
    Java 0 BSD-2-Clause 8 4 2 Updated Mar 28, 2025
  • render Public

    Render transformed image tiles

    Java 34 GPL-2.0 33 29 6 Updated Mar 28, 2025
  • n5-universe Public

    Functionality shared across all n5

    Java 1 BSD-2-Clause 5 6 2 Updated Mar 28, 2025
  • n5-utils Public

    simple standalone BigDataViewer for multiple N5 (or HDF5) datasets

    Java 8 18 14 0 Updated Mar 27, 2025
  • n5-ij Public

    ImageJ convenience layer for N5

    Java 16 BSD-2-Clause 12 22 (1 issue needs help) 1 Updated Mar 27, 2025
  • paintera Public
    Java 104 GPL-2.0 17 72 (12 issues need help) 2 Updated Mar 27, 2025
  • n5 Public

    Not HDF5

    Java 177 BSD-2-Clause 22 17 8 Updated Mar 26, 2025
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