15 Pull requests merged by 3 people

• [no ci] docs: fix link to point estimation notebook

  #405 merged Apr 12, 2025

• Proof-read and clarify v1 to v2 transition notebook.

  #401 merged Apr 12, 2025

• Enable integration with fixed, non-uniform schedule.

  #404 merged Apr 12, 2025

• Add class for custom transforms to adapter, similar to LambdaTransform.

  #399 merged Apr 12, 2025

• Enable Mamba as Summary Nets

  #398 merged Apr 11, 2025

• Allow positional include transforms

  #397 merged Apr 8, 2025

• Force contiguous searchsorted

  #396 merged Apr 8, 2025

• Run linter for test examples PR

  #395 merged Apr 8, 2025

• Add c2st

  #389 merged Apr 8, 2025

• Test examples

  #393 merged Apr 8, 2025

• remove width and depth argument in MLP

  #392 merged Apr 8, 2025

• Adapter scale and shift

  #394 merged Apr 8, 2025

• Update Workflows

  #366 merged Apr 8, 2025

• Docs: clarify installation instructions for v2

  #387 merged Apr 7, 2025

• Docs: more explicit make command names

  #385 merged Apr 7, 2025

16 Issues closed by 4 people

• Integrators: Allow passing an integration schedule with fixed time-points

  #402 closed Apr 12, 2025

• Simplify use of arbitrary custom transforms in the `Adapter`

  #362 closed Apr 12, 2025

• `BasicWorkflow` requires redundant specification of `inference_variables` despite adapter definition

  #390 closed Apr 9, 2025

• Correct transformation of second-order tensors in adapters

  #304 closed Apr 8, 2025

• Allow positional include args for FilterTransforms in Adapter

  #249 closed Apr 8, 2025

• MLP should warn before ignoring width or depth keyword argument

  #298 closed Apr 8, 2025

• Improve Integration Tests

  #311 closed Apr 8, 2025

• Adapter: Add `.shift` and `.scale`

  #353 closed Apr 8, 2025

• README and docs: fix installation instructions, as version 2 is not pip installable yet.

  #386 closed Apr 7, 2025

• Add warning for varying simulator output sizes

  #370 closed Apr 7, 2025

• Remove duplicate progress bar entries

  #359 closed Apr 7, 2025

• Automate Serialization

  #342 closed Apr 7, 2025

• LSTNet + PyTorch cannot be trained (RuntimeError)

  #283 closed Apr 7, 2025

• Workflow: Support user-defined diagnostic metrics and plots

  #279 closed Apr 7, 2025

• Automatically Create Environment Lock Files on Release

  #247 closed Apr 7, 2025

• Customizable loss history for `approximator`

  #217 closed Apr 7, 2025

4 Issues opened by 2 people

• Naming: `utils.weighted_sum` computes weighted mean

  #406 opened Apr 12, 2025

• Add diffusion model as inference network

  #403 opened Apr 11, 2025

• Document classes and functions in `simulators` submodule

  #400 opened Apr 10, 2025

• Improve `get_config` methods

  #391 opened Apr 7, 2025

11 Unresolved conversations

Sometimes conversations happen on old items that aren’t yet closed. Here is a list of all the Issues and Pull Requests with unresolved conversations.

• New adapter transforms: subsetting arrays

  #278 commented on Apr 7, 2025 • 0 new comments

• Error when using spectral normalization in the inference networks' MLP subnet

  #276 commented on Apr 7, 2025 • 0 new comments

• Allow overriding simulators in `.sample()`

  #312 commented on Apr 7, 2025 • 0 new comments

• Allow Pydantic models for network configs

  #344 commented on Apr 7, 2025 • 0 new comments

• Dynamic constraints?

  #356 commented on Apr 7, 2025 • 0 new comments

• Feature Request: Reintroduce trainer.mmd_hypothesis_test() equivalent in bayesflow v2

  #379 commented on Apr 7, 2025 • 0 new comments

• Compile list of functionality not yet ported to v2

  #388 commented on Apr 7, 2025 • 0 new comments

• Gradient of the log probability

  #244 commented on Apr 7, 2025 • 0 new comments

• Data adapter: Keep track of the jacobian for variable transforms

  #245 commented on Apr 10, 2025 • 0 new comments

• Allow passing networks directly instead of using `network=str(), network_kwargs=dict()`

  #343 commented on Apr 11, 2025 • 0 new comments

• Implement Feature for Issue #379: MMD Hypothesis Test

  #384 commented on Apr 7, 2025 • 0 new comments