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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 935 459

  2. Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 233 75

  3. Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 280 141

  4. Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 39 32

  5. CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 83 61

  6. PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    R 191 90

Repositories

Showing 10 of 321 repositories
  • PhenotypeR Public
    R 3 Apache-2.0 0 29 3 Updated Mar 26, 2025
  • CohortGenerator Public

    Cohort Generation for the OMOP Common Data Model

    R 13 11 21 (1 issue needs help) 3 Updated Mar 26, 2025
  • Strategus Public

    An R package for coordinating and executing analytics using HADES modules

    R 6 11 17 3 Updated Mar 26, 2025
  • Kala Public

    [Under development] Kala is an R package that takes one or more instantiated cohort as input and produces time series features, decomposition's, statistical summaries and convenient visualizations.

    R 2 3 3 0 Updated Mar 27, 2025
  • SelfControlledCaseSeries Public

    An R package for performing Self-Controlled Case Series (SCCS) analyses in an observational database in the OMOP Common Data Model.

    R 13 8 16 0 Updated Mar 26, 2025
  • CohortConstructor Public
    R 2 Apache-2.0 0 43 4 Updated Mar 27, 2025
  • ParallelLogger Public

    An R package for easy parallel computing, logging, and function call automation.

    R 12 8 2 (1 issue needs help) 0 Updated Mar 26, 2025
  • Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 233 Unlicense 75 202 11 Updated Mar 26, 2025
  • ARTEMIS Public
    R 1 Apache-2.0 3 1 0 Updated Mar 26, 2025
  • CohortDiagnostics Public

    An R package for performing various cohort diagnostics.

    R 43 50 29 (1 issue needs help) 2 Updated Mar 26, 2025
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