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@RI-imaging

Refractive Index Imaging

software libraries for refractive index imaging in 2D and in 3D

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  1. ODTbrain Public

    Python library for diffraction tomography with the Born and Rytov approximations

    Python 48 12

  2. nrefocus Public

    python library for numerical focusing (refocusing, autofocusing) of complex wave fields

    Python 8 4

  3. qpimage Public

    Python library for manipulating quantitative phase images

    Python 4

  4. qpsphere Public

    Python library for spheres in quantitative phase imaging

    Python 5 2

  5. qpformat Public

    Python library for opening quantitative phase imaging file formats

    Python 1 2

  6. DryMass Public

    manipulation and analysis of phase microscopy data

    Python 3 1

Repositories

Showing 10 of 16 repositories
  • qpretrieve Public

    Phase retrieval from holograms

    Python 4 MIT 2 8 (1 issue needs help) 1 Updated Feb 25, 2025
  • qpformat Public

    Python library for opening quantitative phase imaging file formats

    Python 1 MIT 2 3 0 Updated Feb 7, 2025
  • flimage Public

    Python library for manipulating fluorescence microscopy series data

    Python 0 MIT 2 1 0 Updated Feb 7, 2025
  • CellReel Public

    graphical user interface for refractive index and fluorescence tomography

    Python 1 GPL-3.0 0 15 0 Updated Feb 6, 2025
  • cellsino Public

    Python library for generating sinograms (phase and fluorescence) of cell phantoms for testing tomographic reconstruction algorithms

    Python 4 BSD-3-Clause 2 4 0 Updated Feb 6, 2025
  • DryMass Public

    manipulation and analysis of phase microscopy data

    Python 3 MIT 1 5 (1 issue needs help) 0 Updated Feb 6, 2025
  • nrefocus Public

    python library for numerical focusing (refocusing, autofocusing) of complex wave fields

    Python 8 BSD-3-Clause 4 9 0 Updated Feb 6, 2025
  • ODTbrain Public

    Python library for diffraction tomography with the Born and Rytov approximations

    Python 48 BSD-3-Clause 12 7 0 Updated Feb 6, 2025
  • qpsphere Public

    Python library for spheres in quantitative phase imaging

    Python 5 MIT 2 4 0 Updated Feb 6, 2025
  • radontea Public

    python library for tomographic image reconstruction

    Python 15 BSD-3-Clause 8 1 0 Updated Feb 6, 2025

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