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IOER Jupyter-Book NFDI4Biodiversity Training Materials

This is the public repository for the Jupyter book, available at https://training.fdz.ioer.info/. We use this repository for outreach. All internal collaboration and continuous integration and deployment (CI & CD) takes place in this Gitlab repository.

TL;DR

The workflow is as follows:

  1. Edit notebooks (*.ipynb files) in notebooks/
  2. Commit changes, optionally on a separate branch/fork and create a Pull Request
  3. Notebooks are converted to Markdown and then to Jupyter-book
  4. The jupyter book is published (deployed) under https://stag.training.fdz.ioer.info/ (git staging branch) and https://training.fdz.ioer.info/ (git main branch)
%%{init: { 'theme':'forest', 'securityLevel': 'loose', 'sequence': {'useMaxWidth':false} } }%%
flowchart LR;
   notebooks/01_introduction.ipynb-->01_introduction.md-->HTML-->Gitlab-CI-->Webserver-->'training.fdz.ioer.info'
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See the Contribution Documentation for a brief walkthrough of the collaboration process.

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Public repository for the Jupyter book (original repository: https://gitlab.hrz.tu-chemnitz.de/ioer/fdz/jupyter-book-nfdi4biodiversity) with training material on how to connect to the IOER Monitor API and the GBIF Database API to query and process spatial data.

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