This repo contains supporting material for Molecular Dynamics Simulations using the NAnoscale Molecular Dynamics NAMD program:
- Some of the most common CHARMM ForceField files for use with NAMD
- Sample scripts for running MD simulations with NAMD (for minimization, equilibration and production) under different thermodynamic conditions
- Python scripts for analysis of NAMD output
For an overview about preparing NAMD simulations and instructions on how to install and run NAMD (in catalan) see: