A full spaCy pipeline and models for scientific/biomedical documents.

Library for clinical NLP with spaCy.

A Jupyter widget using sigma.js to render interactive networks.

Mild tweaking of bhargavchippada's wonderful implementation of Gephi's ForceAtlas2 graph layout, which is currently deprecated

Pseudo Genius is a ML transformer-based package for the classification of gene sequences from Mycobacterium species into 'pseudogenes'

PubMed-FAST-Scrape is a Python package intended for Biomedical NLP scientists. Offers x200 faster scraping than otherwise. It enables researchers and data scientists to easily gather articles based…

Processing pipeline for pan-genome visulization and exploration