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thinning error #45

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buhl22 opened this Issue Jun 7, 2016 · 3 comments

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@buhl22

buhl22 commented Jun 7, 2016

I tried again to install nefi from source on ubuntu and i got the gui to run. but when i try to run a pipeline i get the follow error:
libpng warning: iCCP: known incorrect sRGB profile
Adding a QLayout to a QSplitter is not supported.
Set modified
Set modified
Set modified
Set modified
Start pipeline at 0
UnSet modified
Current cat <segmentation.CatBody object at 0x7f94d3e585c0>
Failed to process pipeline
Traceback (most recent call last):
File "/home/buhl/.nefi2/nefi2/view/main_controller.py", line 1883, in run
self.pipeline.process()
File "/home/buhl/.nefi2/nefi2/model/pipeline.py", line 297, in process
cat.process(data)
File "/home/buhl/.nefi2/nefi2/model/categories/_category.py", line 136, in process
selected_alg.process(args)
File "nefi2/model/algorithms/thinning.py", line 50, in process
skeleton = thinning.guo_hall_thinning(args[0].copy())
AttributeError: module 'thinning' has no attribute 'guo_hall_thinning'

i am quite certain that i installed the thinning algorithm as indicated in guide

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tastyminerals commented Jun 7, 2016

rename thinning.py into thinning_alg.py

@buhl22

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buhl22 commented Jun 9, 2016

okay that fixed the error thank you.
But now no images seem to be saved nor folders created. do i ahve to modify more code. Or rename at other places

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tastyminerals commented Jun 9, 2016

If you see the results on the left pane of nefi2, they are saved.
By default the processing results are saved into nefi/output dir unless explicitly set by user.
If you don't see any results on the left pane after you click "Run" button, you'll need to explain in a separate issue how to reproduce this error.

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