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10x Genomics Single Cell 3' Gene Expression and VDJ Assembly
Python 187 73
10x Genomics Linked-Read Alignment, Variant Calling, Phasing, and Structural Variant Calling
Python 26 5
10x Genomics Linked-Read Diploid De Novo Assembler
C++ 54 24
VDJ Clonotyping & Analysis Tools
Rust utility code
Convert 10x BAM files to the original FASTQs compatible with 10x pipelines
Tools for working FASTQ files from sequencers (R1/R2/I1/I2)
HDF5 for Rust
Example datasets for use with enclone
De Bruijn graphs in Rust
gpython is a python interpreter written in go "batteries not included"
Rust wrapper for STAR aligner
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