This release (finally!) adds the Single-Shell 3-Tissue CSD (SS3T-CSD) method for public (beta) release!
The method is currently available via the
ss3t_csd_beta1 command. Take a look at its command line help page for the basic input and output arguments. By default, expect a run time of roughly 3x the length of a multi-tissue CSD run on a similarly sized dataset, as the algorithm progresses through its iterations (each taking about the equivalent time of 1 multi-tissue CSD run).
More information and tips will be added soon at https://3Tissue.github.io/doc/ss3t-csd.html .