diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..9cd65cf --- /dev/null +++ b/.gitignore @@ -0,0 +1,28 @@ +# All folders modified at each simulations +Sources/gui/dataFmu.mat +Sources/core/data.mat +Sources/core/dataMeasuredS.mat +Sources/core/err.mat +Sources/core/inputSignalS.mat +Sources/core/sol.mat + +# Folder for FMU generation output +Sources/modelica/* +!source/modelica/info.txt + +# Working Directory +Examples/work_dir/* +!Examples/work_dir/info.txt + +# Windows default autosave extension +*.asv +*.autosave + +# OSX / *nix default autosave extension +*.m~ + +# Compiled MEX binaries (all platforms) +*.mex* + +# Simulink Code Generation +slprj/ \ No newline at end of file diff --git a/COPYING.LESSER.txt b/COPYING.LESSER.txt new file mode 100644 index 0000000..65c5ca8 --- /dev/null +++ b/COPYING.LESSER.txt @@ -0,0 +1,165 @@ + GNU LESSER GENERAL PUBLIC LICENSE + Version 3, 29 June 2007 + + Copyright (C) 2007 Free Software Foundation, Inc. + Everyone is permitted to copy and distribute verbatim copies + of this license document, but changing it is not allowed. + + + This version of the GNU Lesser General Public License incorporates +the terms and conditions of version 3 of the GNU General Public +License, supplemented by the additional permissions listed below. + + 0. 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It is safest +to attach them to the start of each source file to most effectively +state the exclusion of warranty; and each file should have at least +the "copyright" line and a pointer to where the full notice is found. + + + Copyright (C) + + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License + along with this program. If not, see . + +Also add information on how to contact you by electronic and paper mail. + + If the program does terminal interaction, make it output a short +notice like this when it starts in an interactive mode: + + Copyright (C) + This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'. + This is free software, and you are welcome to redistribute it + under certain conditions; type `show c' for details. + +The hypothetical commands `show w' and `show c' should show the appropriate +parts of the General Public License. Of course, your program's commands +might be different; for a GUI interface, you would use an "about box". + + You should also get your employer (if you work as a programmer) or school, +if any, to sign a "copyright disclaimer" for the program, if necessary. +For more information on this, and how to apply and follow the GNU GPL, see +. + + The GNU General Public License does not permit incorporating your program +into proprietary programs. If your program is a subroutine library, you +may consider it more useful to permit linking proprietary applications with +the library. If this is what you want to do, use the GNU Lesser General +Public License instead of this License. But first, please read +. diff --git a/Documentation/2012_iTesla_wp3p3_wp3p4_RaPiD_Toolbox_UserDocumentation.pdf b/Documentation/2012_iTesla_wp3p3_wp3p4_RaPiD_Toolbox_UserDocumentation.pdf new file mode 100644 index 0000000..7ee3af6 Binary files /dev/null and b/Documentation/2012_iTesla_wp3p3_wp3p4_RaPiD_Toolbox_UserDocumentation.pdf differ diff --git a/Documentation/2012_iTesla_wp3p3_wp3p4_RaPiD_Toolbox_UserDocumentation.pptx b/Documentation/2012_iTesla_wp3p3_wp3p4_RaPiD_Toolbox_UserDocumentation.pptx new file mode 100644 index 0000000..7267f0b Binary files /dev/null and b/Documentation/2012_iTesla_wp3p3_wp3p4_RaPiD_Toolbox_UserDocumentation.pptx differ diff --git a/Documentation/2013_LV_jmodelica_fmucompilation.pptx b/Documentation/2013_LV_jmodelica_fmucompilation.pptx new file mode 100644 index 0000000..8f1d152 Binary files /dev/null and b/Documentation/2013_LV_jmodelica_fmucompilation.pptx differ diff --git a/Documentation/RaPId_quickStart.docx b/Documentation/RaPId_quickStart.docx new file mode 100644 index 0000000..cf677b3 Binary files /dev/null and b/Documentation/RaPId_quickStart.docx differ diff --git a/Documentation/RaPId_quickStart.pdf b/Documentation/RaPId_quickStart.pdf new file mode 100644 index 0000000..056a9f2 Binary files /dev/null and b/Documentation/RaPId_quickStart.pdf differ diff --git a/Documentation/User Manual.docx b/Documentation/User Manual.docx new file mode 100644 index 0000000..83ff383 Binary files /dev/null and b/Documentation/User Manual.docx differ diff --git a/Examples/CauerLowPassAnalog/CauerLowPassAnalog_container.mat b/Examples/CauerLowPassAnalog/CauerLowPassAnalog_container.mat new file mode 100644 index 0000000..f195858 Binary files /dev/null and b/Examples/CauerLowPassAnalog/CauerLowPassAnalog_container.mat differ diff --git a/Examples/CauerLowPassAnalog/Copyright_Statement.txt b/Examples/CauerLowPassAnalog/Copyright_Statement.txt new file mode 100644 index 0000000..7b11b44 --- /dev/null +++ b/Examples/CauerLowPassAnalog/Copyright_Statement.txt @@ -0,0 +1,22 @@ + + +Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +Francisco Gomez-Lopez + +The authors can be contacted by email: luigiv at kth dot se + +This package is part of Rapid Parameter Identification ("RaPId") . + +RaPId is free software: you can redistribute it and/or modify +it under the terms of the GNU Lesser General Public License as published by +the Free Software Foundation, either version 3 of the License, or +(at your option) any later version. + +RaPId is distributed in the hope that it will be useful, +but WITHOUT ANY WARRANTY; without even the implied warranty of +MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +GNU Lesser General Public License for more details. + +You should have received a copy of the GNU Lesser General Public License +along with RaPId. If not, see . \ No newline at end of file diff --git a/Examples/CauerLowPassAnalog/FMU/JModelica_Cauer.fmu b/Examples/CauerLowPassAnalog/FMU/JModelica_Cauer.fmu new file mode 100644 index 0000000..a6582df Binary files /dev/null and b/Examples/CauerLowPassAnalog/FMU/JModelica_Cauer.fmu differ diff --git a/Examples/CauerLowPassAnalog/measuredDataO.mat b/Examples/CauerLowPassAnalog/measuredDataO.mat new file mode 100644 index 0000000..de0e062 Binary files /dev/null and b/Examples/CauerLowPassAnalog/measuredDataO.mat differ diff --git a/Examples/CauerLowPassAnalog/sim_model.mdl b/Examples/CauerLowPassAnalog/sim_model.mdl new file mode 100644 index 0000000..814e7a5 --- /dev/null +++ b/Examples/CauerLowPassAnalog/sim_model.mdl @@ -0,0 +1,1293 @@ +Model { + Name "sim_model" + Version 8.0 + MdlSubVersion 0 + GraphicalInterface { + NumRootInports 0 + NumRootOutports 0 + ParameterArgumentNames "" + ComputedModelVersion "1.2" + NumModelReferences 0 + NumTestPointedSignals 0 + } + SavedCharacterEncoding "windows-1252" + SaveDefaultBlockParams on + ScopeRefreshTime 0.035000 + OverrideScopeRefreshTime on + DisableAllScopes off + DataTypeOverride "UseLocalSettings" + DataTypeOverrideAppliesTo "AllNumericTypes" + MinMaxOverflowLogging "UseLocalSettings" + MinMaxOverflowArchiveMode "Overwrite" + FPTRunName "Run 1" + MaxMDLFileLineLength 120 + Object { + $PropName "BdWindowsInfo" + $ObjectID 1 + $ClassName "Simulink.BDWindowsInfo" + Object { + $PropName "WindowsInfo" + $ObjectID 2 + $ClassName "Simulink.WindowInfo" + IsActive [1] + Location [1151.0, 261.0, 1094.0, 919.0] + Object { + $PropName "ModelBrowserInfo" + $ObjectID 3 + $ClassName "Simulink.ModelBrowserInfo" + Visible [1] + DockPosition "Left" + Width [50] + Height [50] + Filter [9] + } + Object { + $PropName "ExplorerBarInfo" + $ObjectID 4 + $ClassName "Simulink.ExplorerBarInfo" + Visible [1] + } + Object { + $PropName "EditorsInfo" + $ObjectID 5 + $ClassName "Simulink.EditorInfo" + IsActive [1] + ViewObjType 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SignalLoggingSaveFormat "Dataset" + SaveOutput on + SaveState off + SignalLogging on + DSMLogging on + InspectSignalLogs off + SaveTime on + ReturnWorkspaceOutputs off + StateSaveName "xout" + TimeSaveName "tout" + OutputSaveName "yout" + SignalLoggingName "logsout" + DSMLoggingName "dsmout" + OutputOption "RefineOutputTimes" + OutputTimes "[]" + ReturnWorkspaceOutputsName "out" + Refine "1" + } + Simulink.OptimizationCC { + $ObjectID 10 + Version "1.12.1" + Array { + Type "Cell" + Dimension 8 + Cell "BooleansAsBitfields" + Cell "PassReuseOutputArgsAs" + Cell "PassReuseOutputArgsThreshold" + Cell "ZeroExternalMemoryAtStartup" + Cell "ZeroInternalMemoryAtStartup" + Cell "OptimizeModelRefInitCode" + Cell "NoFixptDivByZeroProtection" + Cell "UseSpecifiedMinMax" + PropName "DisabledProps" + } + BlockReduction on + BooleanDataType on + ConditionallyExecuteInputs on + InlineParams off + UseIntDivNetSlope off + UseFloatMulNetSlope off + UseSpecifiedMinMax off + InlineInvariantSignals off + OptimizeBlockIOStorage on + BufferReuse on + EnhancedBackFolding off + StrengthReduction off + ExpressionFolding on + BooleansAsBitfields off + BitfieldContainerType "uint_T" + EnableMemcpy on + MemcpyThreshold 64 + PassReuseOutputArgsAs "Structure reference" + ExpressionDepthLimit 2147483647 + FoldNonRolledExpr on + LocalBlockOutputs on + RollThreshold 5 + SystemCodeInlineAuto off + StateBitsets off + DataBitsets off + UseTempVars off + ZeroExternalMemoryAtStartup on + ZeroInternalMemoryAtStartup on + InitFltsAndDblsToZero off + NoFixptDivByZeroProtection off + EfficientFloat2IntCast off + EfficientMapNaN2IntZero on + OptimizeModelRefInitCode off + LifeSpan "inf" + MaxStackSize "Inherit from target" + BufferReusableBoundary on + SimCompilerOptimization "Off" + AccelVerboseBuild off + ParallelExecutionInRapidAccelerator on + } + Simulink.DebuggingCC { + $ObjectID 11 + Version "1.12.1" + RTPrefix "error" + ConsistencyChecking "none" + ArrayBoundsChecking "none" + SignalInfNanChecking 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+ ModelReferenceMultiInstanceNormalModeStructChecksumCheck "error" + ModelReferenceVersionMismatchMessage "none" + ModelReferenceIOMismatchMessage "none" + ModelReferenceCSMismatchMessage "none" + UnknownTsInhSupMsg "warning" + ModelReferenceDataLoggingMessage "warning" + ModelReferenceSymbolNameMessage "warning" + ModelReferenceExtraNoncontSigs "error" + StateNameClashWarn "warning" + SimStateInterfaceChecksumMismatchMsg "warning" + SimStateOlderReleaseMsg "error" + InitInArrayFormatMsg "warning" + StrictBusMsg "ErrorLevel1" + BusNameAdapt "WarnAndRepair" + NonBusSignalsTreatedAsBus "none" + LoggingUnavailableSignals "error" + BlockIODiagnostic "none" + SFUnusedDataAndEventsDiag "warning" + SFUnexpectedBacktrackingDiag "warning" + SFInvalidInputDataAccessInChartInitDiag "warning" + SFNoUnconditionalDefaultTransitionDiag "warning" + SFTransitionOutsideNaturalParentDiag "warning" + SFUnconditionalTransitionShadowingDiag "warning" + SFUndirectedBroadcastEventsDiag "warning" + SFTransitionActionBeforeConditionDiag "warning" + } + Simulink.HardwareCC { + $ObjectID 12 + Version "1.12.1" + ProdBitPerChar 8 + ProdBitPerShort 16 + ProdBitPerInt 32 + ProdBitPerLong 32 + ProdBitPerFloat 32 + ProdBitPerDouble 64 + ProdBitPerPointer 32 + ProdLargestAtomicInteger "Char" + ProdLargestAtomicFloat "None" + ProdIntDivRoundTo "Undefined" + ProdEndianess "Unspecified" + ProdWordSize 32 + ProdShiftRightIntArith on + ProdHWDeviceType "32-bit Generic" + TargetBitPerChar 8 + TargetBitPerShort 16 + TargetBitPerInt 32 + TargetBitPerLong 32 + TargetBitPerFloat 32 + TargetBitPerDouble 64 + TargetBitPerPointer 32 + TargetLargestAtomicInteger "Char" + TargetLargestAtomicFloat "None" + TargetShiftRightIntArith on + TargetIntDivRoundTo "Undefined" + TargetEndianess "Unspecified" + TargetWordSize 32 + TargetTypeEmulationWarnSuppressLevel 0 + TargetPreprocMaxBitsSint 32 + TargetPreprocMaxBitsUint 32 + TargetHWDeviceType "Specified" + TargetUnknown off + ProdEqTarget on + } + Simulink.ModelReferenceCC { + $ObjectID 13 + Version "1.12.1" + UpdateModelReferenceTargets "IfOutOfDateOrStructuralChange" + CheckModelReferenceTargetMessage "error" + EnableParallelModelReferenceBuilds off + ParallelModelReferenceErrorOnInvalidPool on + ParallelModelReferenceMATLABWorkerInit "None" + ModelReferenceNumInstancesAllowed "Multi" + PropagateVarSize "Infer from blocks in model" + ModelReferencePassRootInputsByReference on + ModelReferenceMinAlgLoopOccurrences off + PropagateSignalLabelsOutOfModel off + SupportModelReferenceSimTargetCustomCode off + } + Simulink.SFSimCC { + $ObjectID 14 + Version "1.12.1" + SFSimEnableDebug on + SFSimOverflowDetection on + SFSimEcho on + SimBlas on + SimCtrlC on + SimExtrinsic on + SimIntegrity on + SimUseLocalCustomCode off + SimParseCustomCode on + SimBuildMode "sf_incremental_build" + } + Simulink.RTWCC { + $BackupClass "Simulink.RTWCC" + $ObjectID 15 + Version "1.12.1" + Array { + Type "Cell" + Dimension 15 + Cell "IncludeHyperlinkInReport" + Cell "GenerateTraceInfo" + Cell "GenerateTraceReport" + Cell "GenerateTraceReportSl" + Cell "GenerateTraceReportSf" + Cell "GenerateTraceReportEml" + Cell "PortableWordSizes" + Cell "GenerateWebview" + Cell "GenerateCodeMetricsReport" + Cell "GenerateCodeReplacementReport" + Cell "GenerateErtSFunction" + Cell "CreateSILPILBlock" + Cell "CodeExecutionProfiling" + Cell "CodeProfilingSaveOptions" + Cell "CodeProfilingInstrumentation" + PropName "DisabledProps" + } + SystemTargetFile "grt.tlc" + GenCodeOnly off + MakeCommand "make_rtw" + GenerateMakefile on + PackageGeneratedCodeAndArtifacts off + TemplateMakefile "grt_default_tmf" + GenerateReport off + SaveLog off + RTWVerbose on + RetainRTWFile off + ProfileTLC off + TLCDebug off + TLCCoverage off + TLCAssert off + ProcessScriptMode "Default" + ConfigurationMode "Optimized" + ConfigAtBuild off + RTWUseLocalCustomCode off + RTWUseSimCustomCode off + IncludeHyperlinkInReport off + LaunchReport off + PortableWordSizes off + GenerateErtSFunction off + CreateSILPILBlock "None" + CodeExecutionProfiling off + CodeExecutionProfileVariable "executionProfile" + CodeProfilingSaveOptions "SummaryOnly" + CodeProfilingInstrumentation off + TargetLang "C" + IncludeBusHierarchyInRTWFileBlockHierarchyMap off + IncludeERTFirstTime off + GenerateTraceInfo off + GenerateTraceReport off + GenerateTraceReportSl off + GenerateTraceReportSf off + GenerateTraceReportEml off + GenerateCodeInfo off + GenerateWebview off + GenerateCodeMetricsReport off + GenerateCodeReplacementReport off + RTWCompilerOptimization "Off" + CheckMdlBeforeBuild "Off" + CustomRebuildMode "OnUpdate" + Array { + Type "Handle" + Dimension 2 + Simulink.CodeAppCC { + $ObjectID 16 + Version "1.12.1" + Array { + Type "Cell" + Dimension 22 + Cell "IgnoreCustomStorageClasses" + Cell "IgnoreTestpoints" + Cell "InsertBlockDesc" + Cell "InsertPolySpaceComments" + Cell "SFDataObjDesc" + Cell "MATLABFcnDesc" + Cell "SimulinkDataObjDesc" + 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opyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +Francisco Gomez-Lopez + +The authors can be contacted by email: luigiv at kth dot se + +This package is part of Rapid Parameter Identification ("RaPId") . + +RaPId is free software: you can redistribute it and/or modify +it under the terms of the GNU Lesser General Public License as published by +the Free Software Foundation, either version 3 of the License, or +(at your option) any later version. + +RaPId is distributed in the hope that it will be useful, +but WITHOUT ANY WARRANTY; without even the implied warranty of +MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +GNU Lesser General Public License for more details. + +You should have received a copy of the GNU Lesser General Public License +along with RaPId. If not, see . \ No newline at end of file diff --git a/Examples/generator_aggregation/FMU/JModelica_transformed.fmu b/Examples/generator_aggregation/FMU/JModelica_transformed.fmu new file mode 100644 index 0000000..77ac9c6 Binary files /dev/null and b/Examples/generator_aggregation/FMU/JModelica_transformed.fmu differ diff --git a/Examples/generator_aggregation/container.mat b/Examples/generator_aggregation/container.mat new file mode 100644 index 0000000..8acb078 Binary files /dev/null and b/Examples/generator_aggregation/container.mat differ diff --git a/Examples/generator_aggregation/measuredDataO.mat b/Examples/generator_aggregation/measuredDataO.mat new file mode 100644 index 0000000..41855f5 Binary files /dev/null and b/Examples/generator_aggregation/measuredDataO.mat differ diff --git a/Examples/generator_aggregation/sim_model.mdl b/Examples/generator_aggregation/sim_model.mdl new file mode 100644 index 0000000..d3a2fb9 --- /dev/null +++ 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F 8 " + " ( ! % \" $ !D 0 0 9 $,Z7%5S97)S7%1)3E)!0GXQ7$%P<$1A=&%<3&]C86Q<5&5M<%QF;7" + "5<='!A,3(V-V(Q.%]B.68W7S0X-C1?83-E85\\Q,F1D-S(R86,P93=<;6]D96Q$97-C ( '@\" \"P P ^ 0 & % $9-" + "23%5=&EL &9M:71O;VQB;W@N8FQO8VMS &9I9W5R94AA;F1L90!I + +Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +Francisco Gomez-Lopez + +The authors can be contacted by email: luigiv at kth dot se + +This package is part of Rapid Parameter Identification ("RaPId") . + +RaPId is free software: you can redistribute it and/or modify +it under the terms of the GNU Lesser General Public License as published by +the Free Software Foundation, either version 3 of the License, or +(at your option) any later version. + +RaPId is distributed in the hope that it will be useful, +but WITHOUT ANY WARRANTY; without even the implied warranty of +MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +GNU Lesser General Public License for more details. + +You should have received a copy of the GNU Lesser General Public License +along with RaPId. If not, see . \ No newline at end of file diff --git a/Examples/line_equivalent/FMU/Dymola_transformedIO2.fmu b/Examples/line_equivalent/FMU/Dymola_transformedIO2.fmu new file mode 100644 index 0000000..1fbb3ea Binary files /dev/null and b/Examples/line_equivalent/FMU/Dymola_transformedIO2.fmu differ diff --git a/Examples/line_equivalent/FMU/JModelica_transformedIO2.fmu b/Examples/line_equivalent/FMU/JModelica_transformedIO2.fmu new file mode 100644 index 0000000..0b04faa Binary files /dev/null and b/Examples/line_equivalent/FMU/JModelica_transformedIO2.fmu differ diff --git a/Examples/line_equivalent/inputDataO.mat b/Examples/line_equivalent/inputDataO.mat new file mode 100644 index 0000000..49827d5 Binary files /dev/null and b/Examples/line_equivalent/inputDataO.mat differ diff --git a/Examples/line_equivalent/line_equivalent_container.mat b/Examples/line_equivalent/line_equivalent_container.mat new file mode 100644 index 0000000..a312957 Binary files /dev/null and b/Examples/line_equivalent/line_equivalent_container.mat differ diff --git a/Examples/line_equivalent/measuredDataO.mat b/Examples/line_equivalent/measuredDataO.mat new file mode 100644 index 0000000..94160f6 Binary files /dev/null and b/Examples/line_equivalent/measuredDataO.mat differ diff --git a/Examples/line_equivalent/sim_model.mdl b/Examples/line_equivalent/sim_model.mdl new file mode 100644 index 0000000..ba0b9bc --- /dev/null +++ b/Examples/line_equivalent/sim_model.mdl @@ -0,0 +1,1719 @@ +Model { + Name "sim_model" + Version 8.0 + MdlSubVersion 0 + GraphicalInterface { + NumRootInports 0 + NumRootOutports 0 + ParameterArgumentNames "" + ComputedModelVersion "1.19" + NumModelReferences 0 + NumTestPointedSignals 0 + } + SavedCharacterEncoding "windows-1252" + slprops.hdlmdlprops { + $PropName "HDLParams" + $ObjectID 1 + Array { + Type "Cell" + Dimension 2 + Cell "HDLSubsystem" + Cell "sim_model" + PropName "mdlProps" + } + } + SaveDefaultBlockParams on + ScopeRefreshTime 0.035000 + OverrideScopeRefreshTime on + DisableAllScopes off + DataTypeOverride "UseLocalSettings" + DataTypeOverrideAppliesTo "AllNumericTypes" + MinMaxOverflowLogging "UseLocalSettings" + MinMaxOverflowArchiveMode "Overwrite" + FPTRunName "Run 1" + MaxMDLFileLineLength 120 + Object { + $PropName "BdWindowsInfo" + $ObjectID 2 + $ClassName "Simulink.BDWindowsInfo" + Object { + $PropName "WindowsInfo" + $ObjectID 3 + $ClassName "Simulink.WindowInfo" + IsActive [1] + Location [1302.0, 148.0, 1033.0, 949.0] + Object { + $PropName "ModelBrowserInfo" + $ObjectID 4 + $ClassName "Simulink.ModelBrowserInfo" + Visible [1] + DockPosition "Left" + Width [50] + Height [50] + Filter [9] + } + Object { + $PropName "ExplorerBarInfo" + $ObjectID 5 + $ClassName "Simulink.ExplorerBarInfo" + Visible [1] + } + Object { + $PropName "EditorsInfo" + $ObjectID 6 + $ClassName "Simulink.EditorInfo" + IsActive [1] + ViewObjType "SimulinkTopLevel" + LoadSaveID "0" + Extents [777.0, 706.0] + ZoomFactor [1.0740276035131742] + Offset [-2.5350467289719631, -41.669392523364536] + } + } + } + Created "Thu Sep 10 22:08:52 2015" + Creator "Tin Rabuzin" + UpdateHistory "UpdateHistoryNever" + ModifiedByFormat "%" + LastModifiedBy "Tin Rabuzin" + ModifiedDateFormat "%" + LastModifiedDate "Mon Sep 14 15:25:06 2015" + RTWModifiedTimeStamp 364145105 + ModelVersionFormat "1.%" + ConfigurationManager "None" + SampleTimeColors off + SampleTimeAnnotations off + LibraryLinkDisplay "disabled" + WideLines off + ShowLineDimensions off + ShowPortDataTypes off + ShowDesignRanges off + ShowLoopsOnError on + IgnoreBidirectionalLines off + ShowStorageClass off + ShowTestPointIcons on + ShowSignalResolutionIcons on + ShowViewerIcons on + SortedOrder off + ExecutionContextIcon off + ShowLinearizationAnnotations on + BlockNameDataTip off + BlockParametersDataTip off + BlockDescriptionStringDataTip off + ToolBar on + StatusBar on + BrowserShowLibraryLinks off + BrowserLookUnderMasks off + SimulationMode "normal" + LinearizationMsg "none" + Profile off + ParamWorkspaceSource "MATLABWorkspace" + AccelSystemTargetFile "accel.tlc" + AccelTemplateMakefile "accel_default_tmf" + AccelMakeCommand "make_rtw" + TryForcingSFcnDF off + Object { + $PropName "DataLoggingOverride" + $ObjectID 7 + $ClassName "Simulink.SimulationData.ModelLoggingInfo" + model_ "sim_model" + overrideMode_ [0.0] + Array { + Type "Cell" + Dimension 1 + Cell "sim_model" + PropName "logAsSpecifiedByModels_" + } + Array { + Type "Cell" + Dimension 1 + Cell [] + PropName "logAsSpecifiedByModelsSSIDs_" + } + } + RecordCoverage off + CovPath "/" + CovSaveName "covdata" + CovMetricSettings "dw" + CovNameIncrementing off + CovHtmlReporting on + CovForceBlockReductionOff on + covSaveCumulativeToWorkspaceVar on + CovSaveSingleToWorkspaceVar on + CovCumulativeVarName "covCumulativeData" + CovCumulativeReport off + CovReportOnPause on + CovModelRefEnable "Off" + CovExternalEMLEnable off + ExtModeBatchMode off + ExtModeEnableFloating on + 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SignalLogging on + DSMLogging on + InspectSignalLogs off + SaveTime on + ReturnWorkspaceOutputs off + StateSaveName "xout" + TimeSaveName "tout" + OutputSaveName "yout" + SignalLoggingName "logsout" + DSMLoggingName "dsmout" + OutputOption "RefineOutputTimes" + OutputTimes "[]" + ReturnWorkspaceOutputsName "out" + Refine "1" + } + Simulink.OptimizationCC { + $ObjectID 11 + Version "1.12.1" + Array { + Type "Cell" + Dimension 8 + Cell "BooleansAsBitfields" + Cell "PassReuseOutputArgsAs" + Cell "PassReuseOutputArgsThreshold" + Cell "ZeroExternalMemoryAtStartup" + Cell "ZeroInternalMemoryAtStartup" + Cell "OptimizeModelRefInitCode" + Cell "NoFixptDivByZeroProtection" + Cell "UseSpecifiedMinMax" + PropName "DisabledProps" + } + BlockReduction on + BooleanDataType on + ConditionallyExecuteInputs on + InlineParams off + UseIntDivNetSlope off + UseFloatMulNetSlope off + UseSpecifiedMinMax off + InlineInvariantSignals off + OptimizeBlockIOStorage on + BufferReuse on + EnhancedBackFolding off + StrengthReduction off + ExpressionFolding on + BooleansAsBitfields off + BitfieldContainerType "uint_T" + EnableMemcpy on + MemcpyThreshold 64 + PassReuseOutputArgsAs "Structure reference" + ExpressionDepthLimit 2147483647 + FoldNonRolledExpr on + LocalBlockOutputs on + RollThreshold 5 + SystemCodeInlineAuto off + StateBitsets off + DataBitsets off + UseTempVars off + ZeroExternalMemoryAtStartup on + ZeroInternalMemoryAtStartup on + InitFltsAndDblsToZero off + NoFixptDivByZeroProtection off + EfficientFloat2IntCast off + EfficientMapNaN2IntZero on + OptimizeModelRefInitCode off + LifeSpan "inf" + MaxStackSize "Inherit from target" + BufferReusableBoundary on + SimCompilerOptimization "Off" + AccelVerboseBuild off + ParallelExecutionInRapidAccelerator on + } + Simulink.DebuggingCC { + $ObjectID 12 + Version "1.12.1" + RTPrefix "error" + ConsistencyChecking "none" + ArrayBoundsChecking "none" + SignalInfNanChecking "none" + SignalRangeChecking "none" + ReadBeforeWriteMsg "UseLocalSettings" + WriteAfterWriteMsg "UseLocalSettings" + WriteAfterReadMsg "UseLocalSettings" + AlgebraicLoopMsg "error" + ArtificialAlgebraicLoopMsg "warning" + SaveWithDisabledLinksMsg "warning" + SaveWithParameterizedLinksMsg "warning" + CheckSSInitialOutputMsg on + UnderspecifiedInitializationDetection "Classic" + MergeDetectMultiDrivingBlocksExec "none" + CheckExecutionContextPreStartOutputMsg off + CheckExecutionContextRuntimeOutputMsg off + SignalResolutionControl "UseLocalSettings" + BlockPriorityViolationMsg "warning" + MinStepSizeMsg "warning" + TimeAdjustmentMsg "none" + MaxConsecutiveZCsMsg "error" + MaskedZcDiagnostic "warning" + IgnoredZcDiagnostic "warning" + SolverPrmCheckMsg "none" + InheritedTsInSrcMsg "warning" + DiscreteInheritContinuousMsg "warning" + MultiTaskDSMMsg "error" + MultiTaskCondExecSysMsg "error" + MultiTaskRateTransMsg "error" + SingleTaskRateTransMsg "none" + TasksWithSamePriorityMsg "warning" + SigSpecEnsureSampleTimeMsg "warning" + CheckMatrixSingularityMsg "none" + IntegerOverflowMsg "warning" + Int32ToFloatConvMsg "warning" + ParameterDowncastMsg "error" + ParameterOverflowMsg "error" + ParameterUnderflowMsg "none" + ParameterPrecisionLossMsg "warning" + ParameterTunabilityLossMsg "warning" + FixptConstUnderflowMsg "none" + FixptConstOverflowMsg "none" + FixptConstPrecisionLossMsg "none" + UnderSpecifiedDataTypeMsg "none" + UnnecessaryDatatypeConvMsg "none" + VectorMatrixConversionMsg "none" + InvalidFcnCallConnMsg "error" + FcnCallInpInsideContextMsg "EnableAllAsError" + SignalLabelMismatchMsg "none" + UnconnectedInputMsg "warning" + UnconnectedOutputMsg "warning" + UnconnectedLineMsg "warning" + SFcnCompatibilityMsg "none" + FrameProcessingCompatibilityMsg "warning" + UniqueDataStoreMsg "none" + BusObjectLabelMismatch "warning" + RootOutportRequireBusObject "warning" + AssertControl "UseLocalSettings" + EnableOverflowDetection off + ModelReferenceIOMsg "none" + ModelReferenceMultiInstanceNormalModeStructChecksumCheck "error" + ModelReferenceVersionMismatchMessage "none" + ModelReferenceIOMismatchMessage "none" + ModelReferenceCSMismatchMessage "none" + UnknownTsInhSupMsg "warning" + ModelReferenceDataLoggingMessage "warning" + ModelReferenceSymbolNameMessage "warning" + ModelReferenceExtraNoncontSigs "error" + StateNameClashWarn "warning" + SimStateInterfaceChecksumMismatchMsg "warning" + SimStateOlderReleaseMsg "error" + InitInArrayFormatMsg "warning" + StrictBusMsg "ErrorLevel1" + BusNameAdapt "WarnAndRepair" + NonBusSignalsTreatedAsBus "none" + LoggingUnavailableSignals "error" + BlockIODiagnostic "none" + SFUnusedDataAndEventsDiag "warning" + SFUnexpectedBacktrackingDiag "warning" + SFInvalidInputDataAccessInChartInitDiag "warning" + SFNoUnconditionalDefaultTransitionDiag "warning" + SFTransitionOutsideNaturalParentDiag "warning" + SFUnconditionalTransitionShadowingDiag "warning" + SFUndirectedBroadcastEventsDiag "warning" + SFTransitionActionBeforeConditionDiag "warning" + } + Simulink.HardwareCC { + $ObjectID 13 + Version "1.12.1" + ProdBitPerChar 8 + ProdBitPerShort 16 + ProdBitPerInt 32 + ProdBitPerLong 32 + ProdBitPerFloat 32 + ProdBitPerDouble 64 + ProdBitPerPointer 32 + ProdLargestAtomicInteger "Char" + ProdLargestAtomicFloat "None" + ProdIntDivRoundTo "Undefined" + ProdEndianess "Unspecified" + ProdWordSize 32 + ProdShiftRightIntArith on + ProdHWDeviceType "32-bit Generic" + TargetBitPerChar 8 + TargetBitPerShort 16 + TargetBitPerInt 32 + TargetBitPerLong 32 + TargetBitPerFloat 32 + TargetBitPerDouble 64 + TargetBitPerPointer 32 + TargetLargestAtomicInteger "Char" + TargetLargestAtomicFloat "None" + TargetShiftRightIntArith on + TargetIntDivRoundTo "Undefined" + TargetEndianess "Unspecified" + TargetWordSize 32 + TargetTypeEmulationWarnSuppressLevel 0 + TargetPreprocMaxBitsSint 32 + TargetPreprocMaxBitsUint 32 + TargetHWDeviceType "Specified" + TargetUnknown off + ProdEqTarget on + } + Simulink.ModelReferenceCC { + $ObjectID 14 + Version "1.12.1" + UpdateModelReferenceTargets "IfOutOfDateOrStructuralChange" + CheckModelReferenceTargetMessage "error" + EnableParallelModelReferenceBuilds off + ParallelModelReferenceErrorOnInvalidPool on + ParallelModelReferenceMATLABWorkerInit "None" + ModelReferenceNumInstancesAllowed "Multi" + PropagateVarSize "Infer from blocks in model" + ModelReferencePassRootInputsByReference on + ModelReferenceMinAlgLoopOccurrences off + PropagateSignalLabelsOutOfModel off + SupportModelReferenceSimTargetCustomCode off + } + Simulink.SFSimCC { + $ObjectID 15 + Version "1.12.1" + SFSimEnableDebug on + SFSimOverflowDetection on + SFSimEcho on + SimBlas on + SimCtrlC on + SimExtrinsic on + SimIntegrity on + SimUseLocalCustomCode off + SimParseCustomCode on + SimBuildMode "sf_incremental_build" + } + Simulink.RTWCC { + $BackupClass "Simulink.RTWCC" + $ObjectID 16 + Version "1.12.1" + Array { + Type "Cell" + Dimension 15 + Cell "IncludeHyperlinkInReport" + Cell "GenerateTraceInfo" + Cell "GenerateTraceReport" + Cell "GenerateTraceReportSl" + Cell "GenerateTraceReportSf" + Cell "GenerateTraceReportEml" + Cell "PortableWordSizes" + Cell "GenerateWebview" + Cell "GenerateCodeMetricsReport" + Cell "GenerateCodeReplacementReport" + Cell "GenerateErtSFunction" + Cell "CreateSILPILBlock" + Cell "CodeExecutionProfiling" + Cell "CodeProfilingSaveOptions" + Cell "CodeProfilingInstrumentation" + PropName "DisabledProps" + } + SystemTargetFile "grt.tlc" + GenCodeOnly off + MakeCommand "make_rtw" + GenerateMakefile on + PackageGeneratedCodeAndArtifacts off + TemplateMakefile "grt_default_tmf" + GenerateReport off + SaveLog off + RTWVerbose on + RetainRTWFile off + ProfileTLC off + TLCDebug off + TLCCoverage off + TLCAssert off + ProcessScriptMode "Default" + ConfigurationMode "Optimized" + ConfigAtBuild off + RTWUseLocalCustomCode off + RTWUseSimCustomCode off + IncludeHyperlinkInReport off + LaunchReport off + PortableWordSizes off + GenerateErtSFunction off + CreateSILPILBlock "None" + CodeExecutionProfiling off + CodeExecutionProfileVariable "executionProfile" + CodeProfilingSaveOptions "SummaryOnly" + CodeProfilingInstrumentation off + TargetLang "C" + IncludeBusHierarchyInRTWFileBlockHierarchyMap off + IncludeERTFirstTime off + GenerateTraceInfo off + GenerateTraceReport off + GenerateTraceReportSl off + GenerateTraceReportSf off + GenerateTraceReportEml off + GenerateCodeInfo off + GenerateWebview off + GenerateCodeMetricsReport off + GenerateCodeReplacementReport off + RTWCompilerOptimization "Off" + CheckMdlBeforeBuild "Off" + CustomRebuildMode "OnUpdate" + Array { + Type "Handle" + Dimension 2 + Simulink.CodeAppCC { + $ObjectID 17 + Version "1.12.1" + Array { + Type "Cell" + Dimension 22 + Cell "IgnoreCustomStorageClasses" + Cell "IgnoreTestpoints" + Cell "InsertBlockDesc" + Cell "InsertPolySpaceComments" + Cell "SFDataObjDesc" + Cell "MATLABFcnDesc" + Cell "SimulinkDataObjDesc" + Cell "DefineNamingRule" + Cell "SignalNamingRule" + Cell "ParamNamingRule" + Cell "InternalIdentifier" + Cell "InlinedPrmAccess" + Cell "CustomSymbolStr" + Cell "CustomSymbolStrGlobalVar" + Cell "CustomSymbolStrType" + Cell "CustomSymbolStrField" + Cell "CustomSymbolStrFcn" + Cell "CustomSymbolStrFcnArg" + Cell "CustomSymbolStrBlkIO" + Cell "CustomSymbolStrTmpVar" + Cell "CustomSymbolStrMacro" + Cell "ReqsInCode" + PropName "DisabledProps" + } + ForceParamTrailComments off + GenerateComments on + IgnoreCustomStorageClasses on + IgnoreTestpoints off + IncHierarchyInIds off + MaxIdLength 31 + PreserveName off + PreserveNameWithParent off + ShowEliminatedStatement off + OperatorAnnotations off + IncAutoGenComments off + SimulinkDataObjDesc off + SFDataObjDesc off + MATLABFcnDesc off + IncDataTypeInIds off + MangleLength 1 + CustomSymbolStrGlobalVar "$R$N$M" + CustomSymbolStrType "$N$R$M" + CustomSymbolStrField "$N$M" + CustomSymbolStrFcn "$R$N$M$F" + CustomSymbolStrFcnArg "rt$I$N$M" + CustomSymbolStrBlkIO "rtb_$N$M" + CustomSymbolStrTmpVar "$N$M" + CustomSymbolStrMacro "$R$N$M" + DefineNamingRule "None" + ParamNamingRule "None" + SignalNamingRule "None" + InsertBlockDesc off + InsertPolySpaceComments off + SimulinkBlockComments on + MATLABSourceComments off + EnableCustomComments off + InternalIdentifier "Classic" + InlinedPrmAccess "Literals" + ReqsInCode off + UseSimReservedNames off + } + Simulink.GRTTargetCC { + $BackupClass "Simulink.TargetCC" + $ObjectID 18 + Version "1.12.1" + Array { + Type "Cell" + Dimension 15 + Cell "GeneratePreprocessorConditionals" + Cell "IncludeMdlTerminateFcn" + Cell "CombineOutputUpdateFcns" + Cell "SuppressErrorStatus" + Cell "ERTCustomFileBanners" + Cell "GenerateSampleERTMain" + Cell "GenerateTestInterfaces" + Cell "ModelStepFunctionPrototypeControlCompliant" + Cell "CPPClassGenCompliant" + Cell "MultiInstanceERTCode" + Cell "PurelyIntegerCode" + Cell "SupportComplex" + Cell "SupportAbsoluteTime" + Cell "SupportContinuousTime" + Cell "SupportNonInlinedSFcns" + PropName "DisabledProps" + } + TargetFcnLib "ansi_tfl_table_tmw.mat" + TargetLibSuffix "" + TargetPreCompLibLocation "" + CodeReplacementLibrary "ANSI_C" + UtilityFuncGeneration "Auto" + ERTMultiwordTypeDef "System defined" + ERTMultiwordLength 256 + MultiwordLength 2048 + GenerateFullHeader on + GenerateSampleERTMain off + GenerateTestInterfaces off + IsPILTarget off + ModelReferenceCompliant on + ParMdlRefBuildCompliant on + CompOptLevelCompliant on + ConcurrentExecutionCompliant on + IncludeMdlTerminateFcn on + GeneratePreprocessorConditionals "Disable all" + CombineOutputUpdateFcns on + CombineSignalStateStructs off + SuppressErrorStatus off + ERTFirstTimeCompliant off + IncludeFileDelimiter "Auto" + ERTCustomFileBanners off + SupportAbsoluteTime on + LogVarNameModifier "rt_" + MatFileLogging on + MultiInstanceERTCode off + SupportNonFinite on + SupportComplex on + PurelyIntegerCode off + SupportContinuousTime on + SupportNonInlinedSFcns on + SupportVariableSizeSignals off + EnableShiftOperators on + ParenthesesLevel "Nominal" + ModelStepFunctionPrototypeControlCompliant off + CPPClassGenCompliant off + AutosarCompliant off + GRTInterface off + UseMalloc off + ExtMode off + ExtModeStaticAlloc off + ExtModeTesting off + ExtModeStaticAllocSize 1000000 + ExtModeTransport 0 + ExtModeMexFile "ext_comm" + ExtModeIntrfLevel "Level1" + RTWCAPISignals off + RTWCAPIParams off + RTWCAPIStates off + RTWCAPIRootIO off + GenerateASAP2 off + } + PropName "Components" + } + } + hdlcoderui.hdlcc { + $ObjectID 19 + Version "1.12.1" + Description "HDL Coder custom configuration component" + Name "HDL Coder" + Array { + Type "Cell" + Dimension 1 + Cell "" + PropName "HDLConfigFile" + } + HDLCActiveTab "0" + } + PropName "Components" + } + Name "Configuration" + CurrentDlgPage "Diagnostics" + ConfigPrmDlgPosition [ 1275, 326, 2487, 1436 ] + } + PropName "ConfigurationSets" + } + Simulink.ConfigSet { + $PropName "ActiveConfigurationSet" + 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D 8 ( @ % \" $ ! 0 % 0 #@ $ J ;F)R;V9P;W)T

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opyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +Francisco Gomez-Lopez + +The authors can be contacted by email: luigiv at kth dot se + +This file is part of Rapid Parameter Identification ("RaPId") . + +RaPId is free software: you can redistribute it and/or modify +it under the terms of the GNU Lesser General Public License as published by +the Free Software Foundation, either version 3 of the License, or +(at your option) any later version. + +RaPId is distributed in the hope that it will be useful, +but WITHOUT ANY WARRANTY; without even the implied warranty of +MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +GNU Lesser General Public License for more details. + +You should have received a copy of the GNU Lesser General Public License +along with RaPId. If not, see . + diff --git a/Sources/core/RaPIdClass.m b/Sources/core/RaPIdClass.m new file mode 100644 index 0000000..b292c87 --- /dev/null +++ b/Sources/core/RaPIdClass.m @@ -0,0 +1,121 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +classdef RaPIdClass +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [ sol, other ] = cg_algo(RaPIdObject) +%CG_ALGO applying fminunc to compute the minimum of the objective function +%defined by the parameter identification problem settings must contain the +%fields: +% - settings.p0, initial guess for the vector of parameters +% - settings.cgOptions, string containing a command providing the +% optimset for the matlab function fminunc, can please refer to the +% doc fminunc +options = eval(RaPIdObject.cgOptions); +sol = fminunc(@func,RaPIdObject.experimentSettings.p_0,options); +other = []; +end \ No newline at end of file diff --git a/Sources/core/algos/fmincon_algo.m b/Sources/core/algos/fmincon_algo.m new file mode 100644 index 0000000..804bf8e --- /dev/null +++ b/Sources/core/algos/fmincon_algo.m @@ -0,0 +1,46 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [ sol, other] = fmincon_algo(RaPIdObject) +%FMINCON_ALGO applying fmincon to compute the minimum of the objective +%function defined by the parameter identification problem settings must +%contain the fields: +% - settings.p0, initial guess for the vector of parameters +% - settings.p_min, vector of minimum values for all parameters; +% - settings.p_max, vector of maximum values for all parameters; +% - settings.fminconOptions, string representing a command setting the +% options for the matlab function fminunc, can consist of the +% optimset function, please refer to doc fmincon +options = eval(RaPIdObject.fminconSettings); +funcwrapper = @(x) func(x, RaPIdObject); + +if isempty(options) + sol = fmincon(funcwrapper,RaPIdObject.experimentSettings.p_0,[],[],[],[],RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max); +else + sol = fmincon(funcwrapper,RaPIdObject.experimentSettings.p_0,[],[],[],[],RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max,[],options); +end +other = []; + +end + + diff --git a/Sources/core/algos/gaExt_algo.m b/Sources/core/algos/gaExt_algo.m new file mode 100644 index 0000000..84a623b --- /dev/null +++ b/Sources/core/algos/gaExt_algo.m @@ -0,0 +1,55 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [ sol, other] = gaExt_algo(RaPIdObject) +%GAEXT_ALGO applying matlab ga function to compute the minimum of the +% objective function defined by the parameter identification problem +% settings must contain: +% - p0, initial guess for the value of the parameter vector +% - p_min, vector containing the minimal values of all parameters +% - p_max, vector containing the maximal values of all parameters +% - gaExtOptions, string containing a command providing an optimset for +% the matlab ga function, see the doc for the ga function + + +% options = psooptimset(); +% ga(@rastr,2, [],[],[],[],[], [],[],options) +% sol = ga(@func,length(settings.p0),[],[],[],[],settings.p_min,settings.p_max); +options = eval(RaPIdObject.gaExtOptions); +sol = ga(@func,length(RaPIdObject.experimentSettings.p_0),[],[],[],[],RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max,[],options); +other = []; +if RaPIdObject.experimentSettings.verbose + part.p = RaPIdObject.experimentSettings.p_0; + [simuRes] = rapid_simuSystem( part,RaPIdObject); + for k=1:size(simuRes,2) + fitness=fitness+rapid_objectiveFunction2(RaPIdObject.experimentData.realData(i_s,k),simuRes(:,k),RaPIdObject,1); + end + other.beginning =fitness; + part.p = sol; + [simuRes] = rapid_simuSystem( part,RaPIdObject); + for k=1:size(simuRes,2) + fitness=fitness+rapid_objectiveFunction2(RaPIdObject.experimentData.realData(i_s,k),simuRes(:,k),RaPIdObject,1); + end + other.end = fitness; +end +end \ No newline at end of file diff --git a/Sources/core/algos/ga_algo.m b/Sources/core/algos/ga_algo.m new file mode 100644 index 0000000..032200c --- /dev/null +++ b/Sources/core/algos/ga_algo.m @@ -0,0 +1,56 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [ sol, other ] = ga_algo(RaPIdObject) +%GA_ALGO applying OWN_GA to compute the minimum of the objective +%function defined by the parameter identification problem +% settings.ga_options must contain the fields: +% - nbCromosomes, number of chromosome (vectors of parameters) for +% every iterations +% - nbCroossOver1,2, number of crossover operations applied to the +% chromosomes +% - nbMutations, number of mutation operations applied to the +% chromosomes +% - nbReproduction, number of reproduction operations applied to the +% chromosomes +% - limit, number of iteration to the process of the Genetic +% Algorithm +% - fitnessStopRatio, minimal ration currentFitness/intial_Fitness, +% if the ratio becomes lower than this real number, the algorithm +% exits +% - headSize1,2,3, number of chromosomes involved respectivelly in +% the crossovers1/2 and mutations +% - nbReinjection, number of random chromosomes that are kept alive +% even if not performing well +% - nRandMin, minimum of initial particles to be generated +% randomly, restricts the number of particles to be set on a grid +% regularly spaced out in the parameter space, see the function +% GenerateOrganisedSwarm +% - p0s, matrix whose rows are different initial guesses for the +% vector of parameters +% - storeData, boolean allowing to store all the best fitness and +% particles at every iterations (get's big very quickly) +[ sol, other] = own_ga(RaPIdObject,@func); +end + + diff --git a/Sources/core/algos/knitro_algo.m b/Sources/core/algos/knitro_algo.m new file mode 100644 index 0000000..b1a0c70 --- /dev/null +++ b/Sources/core/algos/knitro_algo.m @@ -0,0 +1,67 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [ sol, other] = knitro_algo(RaPIdObject) +%KNITRO_ALGO applies the ktrlink function from the KNITRO toolbox to +%compute the minimum of the objective function defined by the parameter +%identification problem +% settings must have as a fields: +% - p0, vector containing an initial guess for the vector of parameters +% - p_min, vector containing the minimal values acceptable for every +% parameter of the parametere vector +% - p_min, vector containing the maximal values acceptable for every +% parameter of the parametere vector +% - kn_options.knOptions, a string containing a command allowing the +% specification of the optimset for the function KTRLINK, please refer to +% the documentation of this function (can be left empty) +% - kn_options.knOptionsFile, a string containing the path to a +% configuration file for KTRLINK, see the doc of the so-called functions +% for more details, needs to be left empty if not used +% - verbose, if verbose is anything else than zero, the algorithm will +% save some information and output it in second output argument (used for +% debugging) +options = eval(RaPIdObject.knitroSettings.knOptions); +if isempty(RaPIdObject.knitroSettings.knOptionsFile)&&isempty(options) + sol = ktrlink(@func,RaPIdObject.experimentSettings.p_0,[],[],[],[],RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max); +elseif isempty(RaPIdObject.knitroSettings.knOptionsFile) + sol = ktrlink(@func,RaPIdObject.experimentSettings.p_0,[],[],[],[],RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max,[],options); +else + str = RaPIdObject.knitroSettings.knOptionsFile; + sol = ktrlink(@func,RaPIdObject.experimentSettings.p_0,[],[],[],[],RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max,[],options,str ); +end +% storage of historic data +if RaPIdObject.experimentSettings.verbose + part.p = RaPIdObject.experimentSettings.p_0; + [simuRes] = rapid_simuSystem( part,RaPIdObject); + for k=1:size(simuRes,2) + fitness=fitness+rapid_objectiveFunction2(RaPIdObject.experimentData.realData(i_s,k),simuRes(:,k),RaPIdObject,1); + end + other.beginning =fitness; + part.p = sol; + [simuRes] = rapid_simuSystem( part,RaPIdObject); + for k=1:size(simuRes,2) + fitness=fitness+rapid_objectiveFunction2(RaPIdObject.experimentData.realData(i_s,k),simuRes(:,k),RaPIdObject,1); + end + other.end = fitness; +end +end \ No newline at end of file diff --git a/Sources/core/algos/naive_algo.m b/Sources/core/algos/naive_algo.m new file mode 100644 index 0000000..f1c218d --- /dev/null +++ b/Sources/core/algos/naive_algo.m @@ -0,0 +1,45 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [sol,other] = naive_algo(RaPIdObject) +%NAIVE_ALGO applies iteratively 1D gradient methods in n = card{vector of +%parameters} perpendicular directions until a certain fitness or a number +%of iterations is reached, the settings struct should contain: +% - naive_options.tolerance1, minimal bound for the ratio +% currentFitness/initialFitness, when this value is reached, the +% algorithm stops +% - naive_options.tolerance2, minimal bound for the ratio +% currentFitness/initialFitness, when this value is reached, the +% algorithm stops, second loop +% - naive_options.iterations,2,3 number maximal of iterations for three +% different levels of loops +% - verbose, should be anything other than 0 only if debug info needs to +% be displayed in console + [sol,other] = naive(RaPIdObject, @func); +end + + + + + + diff --git a/Sources/core/algos/nm_algo.m b/Sources/core/algos/nm_algo.m new file mode 100644 index 0000000..0420181 --- /dev/null +++ b/Sources/core/algos/nm_algo.m @@ -0,0 +1,55 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [ sol, other] = nm_algo(RaPIdObject) +%NM_ALGO applies the FMINSEARCH matlab function to compute the minimum of +%the objective function defined by the parameter identification problem. +% settings contain the fields: +% - p0, vector representing the initial guess for the vector of +% parameters +% - nmOptions, a string which, when evaluated, provides an optimset +% to be provided to FMINSEARCH, see the documentation for the +% aforementioned function. +% - verbose, verbose can be anything other than 0 if debuf info is +% needed in console + +options = eval(RaPIdObject.nmSettings); +options.MaxFunEvals=RaPIdObject.experimentSettings.nbMaxIterations; + +[sol, other] = fminsearch(@func,RaPIdObject.experimentSettings.p_0,options); +%other = []; +if RaPIdObject.experimentSettings.verbose + part.p = RaPIdObject.experimentSettings.p_0; + [simuRes] = rapid_simuSystem( part,RaPIdObject); + for k=1:size(simuRes,2) + fitness=fitness+rapid_objectiveFunction2(RaPIdObject.experimentData.realData(i_s,k),simuRes(:,k),RaPIdObject,1); + end + other.beginning =fitness; + part.p = sol; + [simuRes] = rapid_simuSystem( part,RaPIdObject); + for k=1:size(simuRes,2) + fitness=fitness+rapid_objectiveFunction2(RaPIdObject.experimentData.realData(i_s,k),simuRes(:,k),RaPIdObject,1); + end + other.end = fitness; +end +end \ No newline at end of file diff --git a/Sources/core/algos/pf_algo.m b/Sources/core/algos/pf_algo.m new file mode 100644 index 0000000..175219d --- /dev/null +++ b/Sources/core/algos/pf_algo.m @@ -0,0 +1,39 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [ sol, historic] = pf_algo(RaPIdObject) +%Particle Filter +% +% settings should include a struct field name pso_options containing: +% - overall best position to the next sample of the speed +% - nb_particles: number of particles in the swarm +% - storeData, boolean allowing to store all the best fitness and +% particles at every iterations (get's big very quickly) +[ sol, historic] = pfNew(RaPIdObject,@func); +end + + + + + + diff --git a/Sources/core/algos/psoExt_algo.m b/Sources/core/algos/psoExt_algo.m new file mode 100644 index 0000000..de2eca5 --- /dev/null +++ b/Sources/core/algos/psoExt_algo.m @@ -0,0 +1,53 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [ sol, other] = psoExt_algo(RaPIdObject) +%PSOEXT_ALGO applies PSO from the toolbox "psopt" to compute the minimum of +%the objective function defined by the parameter identification problem +% settings contains the fields: +% - p0, initial guess for the vector of parameters +% - psoExtOptions, a string which, when evaluated, gives the optimset +% to be provided to the PSO function. Check the documentation of the +% function PSO +% - verbose, can be anything else than 0 if debugging information is +% needed + +options = eval(RaPIdObject.psoExtSettings); +% pso(fitnessfcn,nvars,Aineq,bineq,Aeq,beq,LB,UB,nonlcon,options) +sol = pso(@func,length(RaPIdObject.experimentSettings.p_0),[],[],[],[],RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max,[],options); +other = []; +if RaPIdObject.experimentSettings.verbose + part.p = RaPIdObject.experimentSettings.p_0; + [simuRes] = rapid_simuSystem( part,RaPIdObject); + for k=1:size(simuRes,2) + fitness=fitness+rapid_objectiveFunction2(RaPIdObject.experimentData.realData(i_s,k),simuRes(:,k),RaPIdObject,1); + end + other.beginning =fitness; + part.p = sol; + [simuRes] = rapid_simuSystem( part,RaPIdObject); + for k=1:size(simuRes,2) + fitness=fitness+rapid_objectiveFunction2(RaPIdObject.experimentData.realData(i_s,k),simuRes(:,k),RaPIdObject,1); + end + other.end = fitness; +end +end \ No newline at end of file diff --git a/Sources/core/algos/pso_algo.m b/Sources/core/algos/pso_algo.m new file mode 100644 index 0000000..85aaba1 --- /dev/null +++ b/Sources/core/algos/pso_algo.m @@ -0,0 +1,71 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [sol, historic] = pso_algo(RaPIdObject) +%PSO_ALGO Applies the particle swar optimisation function OWN_PSO and +%applies it to the parameter identification problem specified. +% Takes as argument the settings struct in which the data to be matched +% by the parameter estimation was integrated by the function rapid.m It +% starts by generating nb_particle particles (value set in +% settings.pso_options). The initial particles are partly randomlu chosen +% and partly spans the parameter space, being regularly spaced out within +% the bounds specified by p_min and p_max the objective function is +% evaluated at every iterations, after each has been given a speed which +% is determined by random parameters and influenced by the position of +% the overall best solution found and the particle personal best position +% The function returns the historic of all the best position and best +% fitness at every iteration of the process and the swarm at final time +% if required. +% +% settings should include a struct field name pso_options containing: +% - kick_multiplier: when the speed becomes lower than +% norm(v_max)*kick_multiplier, v_max being the speed (computed +% internally) which would lead the particle as far as possible +% inside the space defined by p_min/p_max +% - alpha1: multiplier on the contribution of the last sample of the +% particle's speed to it's next sample +% - alpha2: multiplier on the contribution of the distance to the +% particle's personal best position to the next sample of +% the speed +% - alpha3: multiplier on the contribution of the distance to the swarm's +% overall best position to the next sample of the speed +% - limit: number maximal of iterations in the speeds updates +% - fitnessStopRatio: the algorithm stops if the best fitness reaches +% initialFitness*fitnessStopRatio +% - nb_particles: number of particles in the swarm +% - nRandMin, minimum of initial particles to be generated +% randomly, restricts the number of particles to be set on a grid +% regularly spaced out in the parameter space, see function +% generateOrganisedSwarm +% - p0s, matrix whose rows are different initial guesses for the +% vector of parameters +% - storeData, boolean allowing to store all the best fitness and +% particles at every iterations (get's big very quickly) +[ sol, historic] = own_pso(RaPIdObject,@func); +end + + + + + + diff --git a/Sources/core/functions/algoFunctions/Icon b/Sources/core/functions/algoFunctions/Icon new file mode 100644 index 0000000..e69de29 diff --git a/Sources/core/functions/algoFunctions/chromosome.m b/Sources/core/functions/algoFunctions/chromosome.m new file mode 100644 index 0000000..6d29768 --- /dev/null +++ b/Sources/core/functions/algoFunctions/chromosome.m @@ -0,0 +1,186 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +classdef chromosome < matlab.mixin.Copyable + %CHROMOSOME Class representing a chromosome, entity of the parameter + % space. + % The chromosome is characterised by genes (parameters) and is able to + % organise crossovers with other chromosomes or to undergo a mutation + % attributes: + % p_min,p_max: limit the search path, must be defined in + % settings.p_mxx + % p: position of the particle, i.e. vector of parameters + % fitness: objective function evaluated at position p + properties + p_min = 0; + p_max = 0; + p = 0; + n = 0; + fitness = Inf; % how good it is with regard with the cost function (0 is ideal) + end + + methods + %% Constructors + % constructor generating the initial position randomly + function obj = chromosome(pmin,pmax,p, varargin) + if nargin ==0 + % Allow initalization of chromosome-arrays + else + if nargin == 3 + N=1; + else + N=varargin{1}; + pN=length(p); + end + obj(N) = chromosome; + assert(isempty(p) || iscell(p),'Starting position must be given as cell-array') + assert(length(pmax) == length(pmin),'wrong size for pmin or pmax'); + for ii=1:N + obj(ii).p_min = pmin; + obj(ii).p_max = pmax; + obj(ii).n = length(pmin); + if isempty(p) + obj(ii).p = (obj(ii).p_max - obj(ii).p_min).*rand(obj(ii).n,1)' + obj(ii).p_min; + else + if ii<=pN + obj(ii).p = p{ii}; + else + obj(ii).p = (obj(ii).p_max - obj(ii).p_min).*rand(obj(ii).n,1)' + obj(ii).p_min; + end + end + end + end + end + +% % constructor receiving the initial position +% function obj = chromosome2(pm,pM,pos,verbose) +% if length(pM) ~= length(pm) +% throw('wrong size for pM or pm'); +% end +% obj.p_min = pm; +% obj.p_max = pM; +% obj.n = length(pm); +% obj.p = pos; +% end +% Sort + function [obj,idx]=sort(obj,varargin) + %sort object array with respect to 'Fitness' property + [~,idx]=sort([obj.fitness],varargin{:}); + obj=obj(idx); + end + %% Mutation + % One gene is chosen randomly and changed with a truncated normal + % distribution of variance decreasing with the iterations + % (power 5 chosen arbitrarily, could be parametrised) + function [obj, out_indices] = mutate(obj,nbMutations,n_iter,n_final) + nObjplus1=length(obj)+1; + for ii=1:nbMutations + chromosomeIndex=randperm(nObjplus1-2+ii,1); + [obj, mutatedChromosomeIndex]=obj.duplicateChromosome(chromosomeIndex); + % index = ceil(obj.n*rand(1,1)); + geneIndex=randi([1 obj(1).n]); + pp = inf; + while pp>obj(mutatedChromosomeIndex).p_max(geneIndex) || pp +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [prob] = gaussianKernelProbability(particle, survivedParticles, sigma) + +prob = 1; + +for i=1:size(survivedParticles,1) + diff = survivedParticles(i,:)-particle; + sq_diff = diff*diff'; + prob = prob * exp(-sq_diff/(2*sigma^2)); +end diff --git a/Sources/core/functions/algoFunctions/generateOrganisedSwarm.m b/Sources/core/functions/algoFunctions/generateOrganisedSwarm.m new file mode 100644 index 0000000..c501fa9 --- /dev/null +++ b/Sources/core/functions/algoFunctions/generateOrganisedSwarm.m @@ -0,0 +1,57 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function list = generateOrganisedSwarm( nbParticles, nminRand,p_min,p_max,p0s ) +%GENERATEORGANISEDSWARM Create a list of particles to be given to the +%constructor of chromosome or particle (depends on the algorithm in use) +% nbParticles: number total of particles to be created +% nminRand: number minimal of particles that will have to be generated +% randomly +% p0s: particles that have to be in the list (they might come from +% computations performed in other methods for example) +% this means that we'll try to generate a grid of nbParticles - nminRand -p0s +% regularly spaced particles in the parameter space +% we'll try to have a "cubical grid", that is to say, the discretisation +% of space will be the same on orthogonal directions (there are as +% many points to the grid between p_min(1) and p_max(1) as between p_min(i) +% and p_max(i)) +% +list = {p0s}; +n_a = floor(((nbParticles - nminRand)-size(p0s,1))^(1/length(p_min))); +if n_a > 1 + for i = 1:length(p_min) + t{i} = p_min(i):(p_max(i)-p_min(i))/(n_a-1):p_max(i); + end + + bulk = t{end}'; + for k = length(t)-1:-1:1 + bulk2 = []; + for j = 1:n_a + bulk2 = [bulk2;t{k}(j)*ones(n_a^(length(t)-k),1) bulk]; + end + bulk = bulk2; + end + rndMat = rand(nbParticles-size(p0s,1)-n_a^length(p_min),length(p_min)); + list = {p0s;bulk};%;rndMat.*repmat((p_max-p_min),size(rndMat,1),1) + repmat(p_min,size(rndMat,1),1) +end +end diff --git a/Sources/core/functions/algoFunctions/generateRandomParticle.m b/Sources/core/functions/algoFunctions/generateRandomParticle.m new file mode 100644 index 0000000..55ecddf --- /dev/null +++ b/Sources/core/functions/algoFunctions/generateRandomParticle.m @@ -0,0 +1,27 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [particle] = generateRandomParticle(min_value, max_value) + +particle = unifrnd(min_value, max_value); +end \ No newline at end of file diff --git a/Sources/core/functions/algoFunctions/insertAtPosition.m b/Sources/core/functions/algoFunctions/insertAtPosition.m new file mode 100644 index 0000000..a364b53 --- /dev/null +++ b/Sources/core/functions/algoFunctions/insertAtPosition.m @@ -0,0 +1,47 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [ list, cell ] = insertAtPosition( list, cell, index ) +%INSERTATPOSITION insert the index of the element number index at the +% correct position in a list ordering the chromosomes by increasing fitness +% /!\ to test more thoroughly... +% list, list already existant of sorted particles +% cell, struct containing the whole mass of particles +% index, index in the cell of the particle we would like to add to the +% list +if isempty(list) + list = index; +else + for i = 1:length(list) + if cell{list(i)}.fitness >= cell{index}.fitness + list = [list(1:i-1) index list(i:end)]; + break; + end + if i == length(list) + list = [list index]; + end + end +end + +end + diff --git a/Sources/core/functions/algoFunctions/naive.m b/Sources/core/functions/algoFunctions/naive.m new file mode 100644 index 0000000..cf701b7 --- /dev/null +++ b/Sources/core/functions/algoFunctions/naive.m @@ -0,0 +1,108 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [sol,other] = naive(RaPIdObject,func) +%NAIVE applies iteratively 1D gradient methods in n = card{vector of +%parameters} perpendicular directions until a certain fitness or a number +%of iterations is reached, the settings struct should contain: +% - naive_options.tolerance1, minimal bound for the ratio +% currentFitness/initialFitness, when this value is reached, the +% algorithm stops +% - naive_options.tolerance2, minimal bound for the ratio +% currentFitness/initialFitness, when this value is reached, the +% algorithm stops, second loop +% - naive_options.iterations,2,3 number maximal of iterations for three +% different levels of loops +% - verbose, should be anything other than 0 only if debug info needs to +% be displayed in console +other = []; + +%NAIVE_ALGO +part = particle(RaPIdObject.experimentSettings.p_0,RaPIdObject.experimentSettings.p_0,RaPIdObject.experimentSettings.p_0); +part.p = RaPIdObject.experimentSettings.p_0; +part.fitness = func(part.p,RaPIdObject); +verbose=RaPIdObject.experimentSettings.verbose; +% while abs(initialFitness - particle.fitness) > settings.tolerance1 +for k=1:RaPIdObject.naiveSettings.iterations3 + noSolutionYet = true; + while noSolutionYet + A=rand(length(part.p)); + + B=A'*A ; + [P,D] = eig(B); % P's columns are an orthonormal basis of the particle space + if ((P'*P - eye(length(part.p)))>eps) + % error, some vectors are not orthonormal, repeat the random matrix draw again + else + noSolutionYet = false; + end + P = eye(length(part.p)); + end + % while abs(initialFitness - particle.fitness) > settings.tolerance1 + initialFitness = part.fitness; + for l=1:RaPIdObject.naiveSettings.iterations2 + if verbose + sprintf(strcat('outer ',int2str(l),'***************')) + end + for i = 1:length(part.p) + + fitnessForVector = inf; + for j=1:RaPIdObject.naiveSettings.iterations + if verbose + sprintf(strcat('inner ',int2str(j))) + end + alpha = 1; + fitnessPos = part.fitness; + while alpha > RaPIdObject.naiveSettings.tolerance2 + particle2 = part; + particle2.p = alpha*P(:,i)'+part.p; + particle2.fitness = func(particle2.p,RaPIdObject); + if part.fitness > particle2.fitness + part = particle2; + else + alpha = alpha/2; + end + end + alpha = -1; + while abs(alpha) > RaPIdObject.naiveSettings.tolerance2 + particle2 = part; + particle2.p = alpha*P(:,i)'+part.p; + particle2.fitness = func(particle2.p,RaPIdObject); + if part.fitness > particle2.fitness + part = particle2; + else + alpha = alpha/2; + end + end + fitnessForVector = part.fitness; + end + end + end + % end + sol = part.p; +end + + + + + + diff --git a/Sources/core/functions/algoFunctions/nmoutfun.m b/Sources/core/functions/algoFunctions/nmoutfun.m new file mode 100644 index 0000000..2b39ec4 --- /dev/null +++ b/Sources/core/functions/algoFunctions/nmoutfun.m @@ -0,0 +1,33 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function stop = nmoutfun(x, optimValues, state) +stop = false; +%hold on; +if strcmp(state,'iter') + history(1,end+1)=optimValues.funcCount; + history(2,end)=optimValues.fval; + stairs(history(1,:),history(2,:)); + drawnow +end +end \ No newline at end of file diff --git a/Sources/core/functions/algoFunctions/own_ga.m b/Sources/core/functions/algoFunctions/own_ga.m new file mode 100644 index 0000000..ca3f7e1 --- /dev/null +++ b/Sources/core/functions/algoFunctions/own_ga.m @@ -0,0 +1,138 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [ sol, other] = own_ga(RaPIdObject,func) +%OWN_GA computes the minimum of the objective function defined by the +%parameter identification problem gaSettings must contain the +%fields: +% - nbCromosomes, number of chromosome (vectors of parameters) for +% every iterations +% - nbCroossOver1,2, number of crossover operations applied to the +% chromosomes +% - nbMutations, number of mutation operations applied to the +% chromosomes +% - nbReproduction, number of reproduction operations applied to the +% chromosomes +% - limit, number of iteration to the process of the Genetic +% Algorithm +% - fitnessStopRatio, minimal ration currentFitness/intial_Fitness, +% if the ratio becomes lower than this real number, the algorithm +% exits +% - headSize1,2,3, number of chromosomes involved respectivelly in +% the crossovers1/2 and mutations +% - nbReinjection, number of random chromosomes that are kept alive +% even if not performing well +% - nRandMin, minimum of initial particles to be generated +% randomly, restricts the number of particles to be set on a grid +% regularly spaced out in the parameter space, see the function +% GenerateOrganisedSwarm +% - p0s, matrix whose rows are different initial guesses for the +% vector of parameters +% - saveHist, boolean allowing to store all the best fitness and +% particles at every iterations (get's big very quickly) +global nbIterations +nbIterations=0; + +% fetch parameters of the ga algorithm + +gaSettings=RaPIdObject.gaSettings; +saveHist=RaPIdObject.experimentSettings.saveHist; +nbCromosomes = gaSettings.nbCromosomes; +nbCroossOver1 = gaSettings.nbCroossOver1; +nbCroossOver2 = gaSettings.nbCroossOver2; +nbMutations = gaSettings.nbMutations; +nbReproduction = gaSettings.nbReproduction; +headSize1 = gaSettings.headSize1; +headSize2 = gaSettings.headSize2; +headSize3 = gaSettings.headSize3; +limit = RaPIdObject.experimentSettings.maxIterations; % hundred iterations, chosen randomly, the terminal condition should be better +best = 1e66; +bestP = []; +verbose=RaPIdObject.experimentSettings.verbose; +T=ChromosomeArray(nbCromosomes+2*(nbCroossOver1+nbCroossOver2)+nbMutations); +% creating the cell through initialisation of chromosomes +% should also include a grid and an initial guess just like for pso +list = generateOrganisedSwarm(nbCromosomes, gaSettings.nRandMin,RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max,RaPIdObject.experimentSettings.p_0); +for k=1:length(list) + T.createChromosome(RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max,list{k}); +end +for k=1:nbCromosomes-length(list) + T.createChromosome(RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max,[]); +end + +%% compute the fitness of every generated chromosome +for k = T.pointerToLastOldChromosome+1:T.pointerToNewChromosome-1 + % debug info display + if verbose&&mod(k,10) == 0 + sprintf(strcat('iteration ',int2str(k),' in ga initialisation')); + end + fitness = func(T.ChromosomeList(k).p, RaPIdObject); + T.ChromosomeList(k).fitness = fitness; +end +T.pointerToLastOldChromosome=k; +sort(T,'ascend'); +best = T.ChromosomeList(1).fitness; +bestP = T.ChromosomeList(1).p; +%% Body +iteration = 0; + +while iteration < limit %%&& best(end) > best_i*gaSettings.fitnessStopRatio + % debug info display + if verbose&&mod(iteration,10) == 0 + sprintf(strcat('iteration ',int2str(iteration),' in ga body')); + end + T.doCrossOverType1(nbCroossOver1); % Check that this is correct wrt headSize1!!! Can be mistake in original code aswell + for k=T.pointerToLastOldChromosome+1:T.pointerToNewChromosome-1 + T.ChromosomeList(k).fitness=func(T.ChromosomeList(k).p,RaPIdObject); + end + T.pointerToLastOldChromosome=k; + T.doCrossOverType2(nbCroossOver2); % Check that this is correct wrt headSize2!!! Can be mistake in original code aswell + for k=T.pointerToLastOldChromosome+1:T.pointerToNewChromosome-1 + T.ChromosomeList(k).fitness=func(T.ChromosomeList(k).p,RaPIdObject); + end + T.pointerToLastOldChromosome=k; + T.mutateRandomChromosomes(nbCroossOver2, iteration, limit);% Check that this is correct wrt headSize3!!! Can be mistake in original code aswell + for k=T.pointerToLastOldChromosome+1:T.pointerToNewChromosome-1 + T.ChromosomeList(k).fitness=func(T.ChromosomeList(k).p,RaPIdObject); + end + T.pointerToLastOldChromosome=k; + sort(T.ChromosomeList,'ascend'); + %% Evolution: who survives to this round + T.survivalOfTheFittest(nbCromosomes); + iteration = iteration + 1; + disp(['i = ' num2str(iteration) '. Best parameters: ' num2str(bestP(1,:)) ' with fitness = ' num2str(best)]) + if saveHist + best = [best;T.ChromosomeList(1).fitness]; + bestP = [bestP;T.ChromosomeList(1).p]; + else + best = T.ChromosomeList(1).fitness; + bestP = T.ChromosomeList(1).p; + end +end +sol = bestP; +other.fitness = best; +other.chromosome = T.ChromosomeList; +delete(T); +end + + diff --git a/Sources/core/functions/algoFunctions/own_pf.m b/Sources/core/functions/algoFunctions/own_pf.m new file mode 100644 index 0000000..9bbd455 --- /dev/null +++ b/Sources/core/functions/algoFunctions/own_pf.m @@ -0,0 +1,153 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +% function pf_track(Z,X,VERBOSE) +% Performs the particle filter tracking +% Inputs: +% Z: 2xK +% X: 2xK +% VERBOSE: 1x1 +% VERBOSE \in {0: no visual output, 1: information about end resutls, 2: shows particles} +function [ sol, historic,settings] = own_pf(settings,func) % excluded VERBOSE +%Parameter Initialization +%if nargin < 3; VERBOSE = 2; end; +%params.state_space_dimension = 3; % substitute with number of parameters +%params.Sigma_Q = diag([100 100]); % measurement noise covariance matrix +%params.M = 1000; +%settings.nbParticles=1000; +%params.motion_type = 2; %0=fixed, 1=linear, 2=circular +%params.v_0 = 2*pi*200/688; +%params.theta_0 = 0; +%params.omega_0 = 2*pi/688; +%params.state_space_bound = [640;480]; +params.thresh_avg_likelihood = 0.0001; % to add into settings +RESAMPLE_METHOD = 1; % 0=vanilla resampling, 1=systematic resampling; % to add into settings +%switch params.state_space_dimension + % case 2 + % params.Sigma_R = diag([2 2]); % process noise covariance matrix + % if params.omega_0; error('2D state space can not use omega_0'); end; + % case 3 + params.Sigma_R = diag([2 2 0.01]); +%end +dt = 1; +%% +% Variable Initialization +%close all; +% Initialise the particle space +list = generateOrganisedSwarm( settings.pf_options.nb_particles, settings.pf_options.nRandMin,settings.p_min,settings.p_max,settings.pf_options.p0s); + +% S.X = [rand(1, params.M)*params.state_space_bound(1); % sampling uniformly from the state space +% rand(1, params.M)*params.state_space_bound(2)]; +% if params.state_space_dimension > 2 +% S.X = [S.X;rand(1, params.M)*2*pi - pi]; +% end + +S.W = 1/params.M * ones(1,params.M); % initialize equal weights +%K = size(Z,2); % number of observations +%mean_S = zeros(2,K); +%figure(1); +%clf; +%% +% Particle Filter Algorithm +for i = 1 : K %end when + %S_bar = pf_predict(S,params,dt); % the same role as parameters given to func to produce the fitness per each particle + %z = Z(:,i); % measurements + + S_bar = pf_weight(S_bar,z,params); % also in the func + switch RESAMPLE_METHOD + case 0 + S = multinomial_resample(S_bar); + case 1 + S = systematic_resample(S_bar); + end + mean_S(:,i) = mean(S.X(1:2,:),2); % compute the center of the distribution +% if VERBOSE > 1 + plot(Z(1,i),Z(2,i),'rx','MarkerSize',10); + hold on; + plot(X(1,i),X(2,i),'go','MarkerSize',20); + plot(S.X(1,:),S.X(2,:),'b.'); + hold off; + axis([0 640 0 480]); + title(sprintf('timestep %d of %d',i,K)); + drawnow; +% end +end +%% +% Analyzing the estimates +err_z = sqrt(sum((Z - X).^2,1)); +err_xhat = sqrt(sum((X - mean_S).^2,1)); +merr_z = mean(err_z); +merr_xhat = mean(err_xhat); +stderr_z = std(err_z); +stderr_xhat = std(err_xhat); +format compact; +display(sprintf('absolute error analysis: measurements: %0.1f +- %0.1f, estimates: %0.1f +- %0.1f',merr_z,stderr_z, merr_xhat,stderr_xhat)); +% if VERBOSE + figure(3); + clf; + plot(err_z,'r-'); + hold on; + plot(err_xhat,'b-'); + title(sprintf('absolute error analysis: measurements: %0.1f \\pm %0.1f, estimates: %0.1f \\pm %0.1f',merr_z,stderr_z, merr_xhat,stderr_xhat)); +% if VERBOSE > 1 +% figure(2); +% visualize_vision_data(Z,X,mean_S); +% end +% end +end + +% function S = multinomial_resample(S_bar) +% Inputs: +% S_bar(t): structure +% Outputs: +% S(t): structure +function S = multinomial_resample(S_bar) +cdf = cumsum(S_bar.W); +M = size(S_bar.X,2); +S.X = zeros(size(S_bar.X)); +for m = 1 : M + r_m = rand; + i = find(cdf >= r_m,1,'first'); + S.X(:,m) = S_bar.X(:,i); +end +S.W = 1/M*ones(size(S_bar.W)); +end + +% function S = systematic_resample(S_bar) +% This function performs systematic re-sampling +% Inputs: +% S_bar(t): structure +% Outputs: +% S(t): structure +function S = systematic_resample(S_bar) +cdf = cumsum(S_bar.W); +M = size(S_bar.X,2); +S.X = zeros(size(S_bar.X)); +r_0 = rand / M; +for m = 1 : M + i = find(cdf >= r_0,1,'first'); + S.X(:,m) = S_bar.X(:,i); + r_0 = r_0 + 1/M; +end +S.W = 1/M*ones(size(S_bar.W)); +end \ No newline at end of file diff --git a/Sources/core/functions/algoFunctions/own_pso.m b/Sources/core/functions/algoFunctions/own_pso.m new file mode 100644 index 0000000..dceddf4 --- /dev/null +++ b/Sources/core/functions/algoFunctions/own_pso.m @@ -0,0 +1,168 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [sol, historic] = own_pso(RaPIdObject,func) +%OWN_PSO Applies the particle swar optimisation function OWN_PSO and +%applies it to the parameter identification problem specified. +% Takes as argument the settings struct in which the data to be matched +% by the parameter estimation was integrated by the function rapid.m It +% starts by generating nb_particle particles (value set in +% settings.pso_options). The initial particles are partly randomlu chosen +% and partly spans the parameter space, being regularly spaced out within +% the bounds specified by p_min and p_max the objective function is +% evaluated at every iterations, after each has been given a speed which +% is determined by random parameters and influenced by the position of +% the overall best solution found and the particle personal best position +% The function returns the historic of all the best position and best +% fitness at every iteration of the process and the swarm at final time +% if required. +% +% settings should include a struct field name pso_options containing: +% - kick_multiplier: when the speed becomes lower than +% norm(v_max)*kick_multiplier, v_max being the speed (computed +% internally) which would lead the particle as far as possible +% inside the space defined by p_min/p_max +% - alpha1: multiplier on the contribution of the last sample of the +% particle's speed to it's next sample +% - alpha2: multiplier on the contribution of the distance to the +% particle's personal best position to the next sample of +% the speed +% - alpha3: multiplier on the contribution of the distance to the swarm's +% overall best position to the next sample of the speed +% - limit: number maximal of iterations in the speeds updates +% - fitnessStopRatio: the algorithm stops if the best fitness reaches +% initialFitness*fitnessStopRatio +% - nb_particles: number of particles in the swarm +% - nRandMin, minimum of initial particles to be generated +% randomly, restricts the number of particles to be set on a grid +% regularly spaced out in the parameter space, see function +% generateOrganisedSwarm +% - p0s, matrix whose rows are different initial guesses for the +% vector of parameters +% - saveHist, boolean allowing to store all the best fitness and +% particles at every iterations (get's big very quickly) + +global nbIterations +nbIterations=0; +alpha1 = RaPIdObject.psoSettings.alpha1; +alpha2 = RaPIdObject.psoSettings.alpha2; +alpha3 = RaPIdObject.psoSettings.alpha3; +limit = RaPIdObject.experimentSettings.maxIterations; +best = 1e66; +bestP = []; + +best = func(RaPIdObject.experimentSettings.p_0, RaPIdObject); +bestP=RaPIdObject.experimentSettings.p_0; +fit_store=[0;best]; +%% Init the swarm: give positions to all particles +list = generateOrganisedSwarm( RaPIdObject.psoSettings.nb_particles, RaPIdObject.psoSettings.nRandMin,RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max,RaPIdObject.experimentSettings.p_0); +for i = 1:size(list,1) + swarm{i} = particle(RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max,list{i}); +end +for i = size(list,1)+1:RaPIdObject.psoSettings.nb_particles + swarm{i} = particle(RaPIdObject.experimentSettings.p_min,RaPIdObject.experimentSettings.p_max,[]); +end +% we should modify this to include the possibility of having a grid along +% with the randomly drawn particles +iteration = 2; +%% init the algorithm, set the best position and fitness to every particle +% and to the overall best +verbose=RaPIdObject.experimentSettings.verbose; +for i = 1:length(swarm) + % debug info display + if verbose&&mod(i,10)==0 + sprintf(strcat('init particle ',int2str(i),' in pso')); + end + fitness = func(swarm{i}.p, RaPIdObject); + swarm{i} = swarm{i}.setBest(fitness); + if fitness < best + best = fitness; + bestP = swarm{i}.p; + fit_store(1,1)=1; + fit_store(2,1)=fitness; + end +end +best_H = [best]; +bestP_H = [bestP]; +disp(['i = 1. Best parameters: ' num2str(bestP) ' with fitness = ' num2str(best)]) +worst_pointer=1; +%% Algorithm's body +% speed update loop +while iteration <= limit&&best_H(end) >= best_H(worst_pointer)*RaPIdObject.psoSettings.fitnessStopRatio + % debug info display + if verbose&&mod(iteration,10) == 0 + sprintf(strcat('iteration ',int2str(iteration),' in pso body')); + end + % loop on all the particles of the swarm + for i = 1:length(swarm) + % debug info display + if verbose&&mod(i,10) == 0 + sprintf(strcat('particle ',int2str(iteration))); + end + % update of the particle's speed + swarm{i}.v = alpha1 * rand * swarm{i}.v + alpha2*rand(1,length(swarm{i}.p)).*(swarm{i}.bestPos - swarm{i}.p) + alpha3*rand(1,length(swarm{i}.p)).*(bestP - swarm{i}.p); + % kicks the particle when it's starting to get stuck (position converges) + if norm(swarm{i}.v) < norm(swarm{i}.v_max)*RaPIdObject.psoSettings.kick_multiplier + r = 2*rand(1,length(swarm{i}.p))-1; + swarm{i}.v = (r + swarm{i}.v)*norm(swarm{i}.v_max)/norm(r+swarm{i}.v); + end + % change the position according to the speed update and update best + % fitness and best position + swarm{i} = swarm{i}.updatePart(); + fitness = func(swarm{i}.p, RaPIdObject); + if fitness < swarm{i}.bestValue + swarm{i}.bestPos = swarm{i}.p; + swarm{i}.bestValue = fitness; + %swarm{i}.setBest(fitness); + end + if fitness < best + disp(['i = ' num2str(iteration) '. Best parameters: ' num2str(swarm{i}.p) ' with fitness = ' num2str(fitness)]) + bestP = swarm{i}.p; + best = fitness; + fit_store([1,2],end+1)=[iteration*RaPIdObject.psoSettings.nb_particles + i;fitness]; + end + + end + iteration = iteration + 1; + + if RaPIdObject.experimentSettings.saveHist + best_H = [best_H; best]; + bestP_H = [bestP_H; bestP]; + if ~isfinite(Best_H(worst_pointer)) + worst_pointer=max(best_H(isfinite(best_H))); + end + end +end +if ~RaPIdObject.experimentSettings.saveHist + best_H=best; + bestP_H=bestP; +end +sol = bestP; +historic.best_H = best_H; +historic.bestP_H = bestP_H; +historic.swarm = swarm; +historic.fit_store=fit_store; +end + + + diff --git a/Sources/core/functions/algoFunctions/particle.m b/Sources/core/functions/algoFunctions/particle.m new file mode 100644 index 0000000..9d8ce02 --- /dev/null +++ b/Sources/core/functions/algoFunctions/particle.m @@ -0,0 +1,116 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +classdef particle + %PARTICLE + % Class representing a particle in the parameter space + % The speed of the particle is given in increment (no sampling time involved) + % particle is characterized by its position + % p: position of the particle, i.e vector of parameters + % v: speed, give the next position + % p_min, p_max: vector defining the size of the parameter space, + % these values constrain v to a limited space + % bestPos, bestValue: we keep in memory a trace of where and how the + % particule best behaved form the first iteration + % positions: historic of the positions for plotting, if plot = true + % given through the function update, don't forget to take into account + % v_min and v_max before calling this function + % use horizontal vector everywhere + % + % Methods: + % updatePart: apply the speed to the particle and update the + % position, v needs to be redefined just before calling this + % function + % setBest: to define and reccord the bestPosition, not a part + % of the method updatePart since the fitness computation is + % exterior to the particle + + properties + v_min = 0; + v_max = 0; + p_min = 0; + p_max = 0; + v = 0; + p = 0; + n = 0; + Ts = 0; + bestPos; + bestValue ; + plot = false; + positions = []; + fitness; + end + + methods + function obj = particle(pm,pM,p) + if length(pM) ~= length(pm) + throw('wrong size for pM or pm'); + end + obj.p_min = pm; + obj.p_max = pM; + obj.n = length(pm); + if isempty(p) + obj.p = (obj.p_max - obj.p_min).*rand(obj.n,1)' + obj.p_min; + else + obj.p = p; + end + obj.v_max = (obj.p_max - obj.p); + obj.v_min = (obj.p_min - obj.p); + obj.v = (obj.v_max - obj.v_min).*rand(obj.n,1)' + obj.v_min; + obj.plot = false; + end + + function obj = particleV(pm,pM,verbose) + if length(pM) ~= length(pm) + throw('wrong size for pM or pm'); + end + obj.p_min = pm; + obj.p_max = pM; + obj.n = length(pm); + obj.p = (obj.p_max - obj.p_min).*rand(obj.n,1)' + obj.p_min; + obj.v_max = (obj.p_max - obj.p); + obj.v_min = (obj.p_min - obj.p); + obj.v = (obj.v_max - obj.v_min).*rand(obj.n,1)' + obj.v_min; + obj.plot = verbose; % boolean for plotting + end + + function obj = updatePart(obj) + obj.v = max(min(obj.v,obj.v_max),obj.v_min); + obj.p = obj.p + obj.v; + obj.v_max = obj.p_max - obj.p; + obj.v_min = obj.p_min - obj.p; + obj.positions = [obj.positions, obj.p']; + + end + + function obj = setBest(obj,value) + obj.bestPos = obj.p; + obj.bestValue = value; + end + + + + end + +end + diff --git a/Sources/core/functions/algoFunctions/pfNew.m b/Sources/core/functions/algoFunctions/pfNew.m new file mode 100644 index 0000000..ad947de --- /dev/null +++ b/Sources/core/functions/algoFunctions/pfNew.m @@ -0,0 +1,123 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [sol, historic] = pfNew(RaPIdObject,func) + + + +min_value=RaPIdObject.experimentSettings.p_min; %min_value = [0, 0]; +max_value=RaPIdObject.experimentSettings.p_max; %max_value = [2, 2]; +num_params = length(RaPIdObject.experimentSettings.p_min); %2; + +num_epochs = RaPIdObject.experimentSettings.maxIterations; %10; +if isempty(RaPIdObject.pfSettings) + RaPIdObject.pfSettings.nb_particles=100; + RaPIdObject.pfSettings.prune_threshold=0.1; + RaPIdObject.pfSettings.kernel_sigma=1; + +end +num_particles = RaPIdObject.pfSettings.nb_particles; %100; +threshold = RaPIdObject.pfSettings.prune_threshold; %0.1; +sigma = RaPIdObject.pfSettings.kernel_sigma; %1; +max_tries=10000; + + +if RaPIdObject.experimentSettings.saveHist + particles_H=zeros(num_epoch*num_particles, num_params); +end + +figure_handle=figure; + +particles=zeros(num_particles,num_params); +particles(1,:)=RaPIdObject.experimentSettings.p_0; +for k=2:num_params + particles(:,num_params) = unifrnd(min_value(k), max_value(k), num_particles, 1); +end + +% particles +figure(figure_handle); +plot_handle=plot(particles(:,1), particles(:,2), 'x'); + +set(plot_handle,'YDataSource','particles(:,2)') +set(plot_handle,'XDataSource','particles(:,1)') +drawnow(); +refreshdata(plot_handle, 'caller') + + +%Start iterating + +for epoch=1:num_epochs + + %Weight particles + + [weights,~] = pfWeighting(RaPIdObject,particles, func); + + % Prune particles + + surviving_inds = (weights > (min(weights) + (1-threshold)*(max(weights)-min(weights)))); + survivedParticles = particles(surviving_inds,:); + survivedWeights = weights(surviving_inds); + num_particles_remaining=sum(surviving_inds); + + % Resampling + + newParticles = [survivedParticles; zeros(num_particles-num_particles_remaining,num_params)]; + counter=0; + while num_particles_remaining < num_particles + counter=counter+1; + randomParticle = generateRandomParticle(min_value, max_value); + probParticle = gaussianKernelProbability(randomParticle, survivedParticles, sigma); + if isempty(survivedWeights) || (unifrnd(0, max(survivedWeights)) < probParticle) || counter >= max_tries % dont want to have infinity loops + num_particles_remaining=num_particles_remaining+1; + newParticles(num_particles_remaining,:) = randomParticle; + end + end + + + + if RaPIdObject.experimentSettings.saveHist + particles_H(((epoch-1)*num_particles + 1:num_particles ),num_params) = newParticles; + end + + particles = newParticles; + refreshdata(plot_handle, 'caller') + drawnow() + +end + +%Define the best particle + +[weights,fitness] = pfWeighting(RaPIdObject,particles,func); + +[~, I] = sort(weights, 'descend'); + +sol=particles(I(1), :); +%'Best particle:\n' +disp(fitness(I(1), :)); +historic.particles_H=particles_H; + +end + + + + diff --git a/Sources/core/functions/algoFunctions/pfWeighting.m b/Sources/core/functions/algoFunctions/pfWeighting.m new file mode 100644 index 0000000..8b01ff9 --- /dev/null +++ b/Sources/core/functions/algoFunctions/pfWeighting.m @@ -0,0 +1,46 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [weights,fitness] = pfWeighting(RaPIdObject,particles,func) + +% mean = [1 1]; +% sigma = 0.6; +% cum_sum=0; +weights = zeros(length(particles(:,1)),1); +fitness=zeros(length(particles(:,1)),1); +for k=1:length(fitness) + fitness(k) = func(particles(k,:),RaPIdObject); % dangerous since func could possibly leave [] +% diff = particles(i,:)-mean; +% sq_diff = diff*diff'; +% weights = [weights; 1/sqrt(2*pi*sigma^2)*exp(-sq_diff/(2*sigma^2))]; +end + +cum_sum=sum(fitness); + +for k=1:length(fitness) + weights(k)=1-(fitness(k)/cum_sum); +end + + + + \ No newline at end of file diff --git a/Sources/core/functions/rapidFunctions/Chromosome.m b/Sources/core/functions/rapidFunctions/Chromosome.m new file mode 100644 index 0000000..2ca81f5 --- /dev/null +++ b/Sources/core/functions/rapidFunctions/Chromosome.m @@ -0,0 +1,84 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +classdef Chromosome < matlab.mixin.Copyable + %CHROMOSOME Class representing a chromosome, entity of the parameter + % space. + % The chromosome is characterised by genes (parameters) and is able to + % organise crossovers with other chromosomes or to undergo a mutation + % attributes: + % p_min,p_max: limit the search path, must be defined in + % settings.p_mxx + % p: position of the particle, i.e. vector of parameters + % fitness: objective function evaluated at position p + properties + p_min = 0; + p_max = 0; + p = 0; + n = 0; + fitness = Inf; % how good it is with regard with the cost function (0 is ideal) + end + methods + %% Constructor + % constructor generating the initial position randomly + function obj = Chromosome(pmin,pmax,p, varargin) + if nargin ==0 + % Allow initalization of chromosome-arrays + else + obj = Chromosome; + %assert(isempty(p) || iscell(p),'Starting position must be given as cell-array') + assert(length(pmax) == length(pmin),'wrong size for pmin or pmax'); + + obj.p_min = pmin; + obj.p_max = pmax; + obj.n = length(pmin); + if isempty(p) + obj.p = (obj.p_max - obj.p_min).*rand(obj.n,1)' + obj.p_min; + else + if obj.n==length(p) + obj.p = p; + else + obj.p = (obj.p_max - obj.p_min).*rand(obj.n,1)' + obj.p_min; + end + end + end + end + %% Set specified Genes + function genes = getGenes(obj,geneList) + genes = obj.p(geneList); + end % change its own genes + %% Get specified Genes + function obj = setGenes(obj,genesToCross,genes) + obj.p(genesToCross) = genes; + obj.fitness=Inf; + end + %% Get random Genes + function [genesToCross,genes] = getRandomGenes(obj) + nb_exchange = ceil((obj.n-1)*rand(1,1)); + ls = randperm(obj.n); + genesToCross = ls(1:nb_exchange); + genes = obj.p(genesToCross); + end + end +end + diff --git a/Sources/core/functions/rapidFunctions/ChromosomeArray.m b/Sources/core/functions/rapidFunctions/ChromosomeArray.m new file mode 100644 index 0000000..27306e3 --- /dev/null +++ b/Sources/core/functions/rapidFunctions/ChromosomeArray.m @@ -0,0 +1,135 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +classdef ChromosomeArray < handle + properties + ChromosomeList=Chromosome % the main Chromosome array + pointerToLastOldChromosome % ptr to place for last old Chromosomes + pointerToNewChromosome % ptr to place for new Chromosomes + listOfUnfitted % unused as of now + end + methods + %% Constructor which create the object and pre-allocates an array of Chromosomes + function obj = ChromosomeArray(n) % Pre-allocate Array + for n=n:-1:1 % counting backwards for Memory pre-allocation + obj.ChromosomeList(n)=Chromosome(); + end + obj.pointerToNewChromosome=1; + obj.pointerToLastOldChromosome=0; + end + %% Create new chromosome + function obj=createChromosome(obj,pmin,pmax,p) % Create actual Chromosomes + ii=obj.pointerToNewChromosome; + assert(length(pmax) == length(pmin),'wrong size for pmin or pmax'); + obj.ChromosomeList(ii).p_min = pmin; + obj.ChromosomeList(ii).p_max = pmax; + obj.ChromosomeList(ii).n = length(pmin); + if isempty(p) || length(pmin) ~= length(p) + obj.ChromosomeList(ii).p = (pmax - pmin).*rand(obj.ChromosomeList(ii).n,1)' + pmin; + else + obj.ChromosomeList(ii).p = p; + end + obj.pointerToNewChromosome=obj.pointerToNewChromosome+1; + end + %% Sort according to fitness + function obj=sort(obj,varargin) + %sort Chromosome array with respect to 'Fitness' property + [~,idx]=sort([obj.ChromosomeList(1:(obj.pointerToNewChromosome-1)).fitness],varargin{:}); + obj.ChromosomeList(1:obj.pointerToNewChromosome-1)=obj.ChromosomeList(idx); + end + %% Duplicate specified chromosomes + function obj=duplicateChromosome(obj, index) + obj.ChromosomeList(obj.pointerToNewChromosome)=copy(obj.ChromosomeList(index)); + obj.pointerToNewChromosome=obj.pointerToNewChromosome+1; + end + %% Mutation + % Wherein genes are chosen randomly and changed with a truncated normal + % distribution of variance decreasing with the iterations + % (power of 5 chosen arbitrarily, could be parametrised) + function obj = mutateRandomChromosomes(obj,nbMutations,n_iter,n_final) + for ii=1:nbMutations + pointerToMutatingChromosome=obj.pointerToNewChromosome; + chromosomeIndex=randperm(pointerToMutatingChromosome-1,1); + obj.duplicateChromosome(chromosomeIndex); + geneIndex=randi([1 obj.ChromosomeList(1).n]); + mutatedGenes = inf; + while mutatedGenes>obj.ChromosomeList(pointerToMutatingChromosome).p_max(geneIndex) || mutatedGenes +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function fitness = func(p,RaPIdObject) +%FUNC Function computing the fitness of a vector of parameter +% p: vector of parameter to be tested +% fitness: fitness of the vector of parameters, calculated relatively to +% an objective function +% see: rapid_simuSystem and rapid_objectiveFunction +% It requires the global variable settings_ to be declared before call to +% this function (in the toolbox this declaration is done in rapid) +% settings should contain all the appropriate parameters +% in this function are used the parameters relative to the simulink model +% settings should contain: +% - Ts, sampling time (not meaningful if variable step method is chosen) +% - tf, final time for the simulation +% - intMethod, integration method (solver used) + +global nbIterations; + +if ~isempty(nbIterations) && (nbIterations > RaPIdObject.experimentSettings.maxIterations) + %error('Toolbox stopped because we reached the max number of iteration, you can ignore the error message and continue'); +end +switch RaPIdObject.experimentSettings.solverMode + case 'ODE' + [simuRes] = rapid_ODEsolve(p,RaPIdObject); + case 'Simulink' + [simuRes] = rapid_simuSystem(p,RaPIdObject); + otherwise + error('In "mySettings.mode": You must select either "ODE" (internal ODE-solvers) or "Simulink"'); +end +if isempty(simuRes) + fitness=1e66; +else + fitness=rapid_objectiveFunction(RaPIdObject.experimentData.referenceOutdata,simuRes,RaPIdObject); + if length(fitness) > 1 + error('problem with fitness size') + end +end + +end \ No newline at end of file diff --git a/Sources/core/functions/rapidFunctions/matlab.mat b/Sources/core/functions/rapidFunctions/matlab.mat new file mode 100644 index 0000000..c401c70 Binary files /dev/null and b/Sources/core/functions/rapidFunctions/matlab.mat differ diff --git a/Sources/core/functions/rapidFunctions/rapid.m b/Sources/core/functions/rapidFunctions/rapid.m new file mode 100644 index 0000000..17e8529 --- /dev/null +++ b/Sources/core/functions/rapidFunctions/rapid.m @@ -0,0 +1,272 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [ sol, historic,RaPIdObject] = rapid(RaPIdObject) +%RAPID main function of the rapid toolbox RaPId +% the settings struct must contain the fields: +% - realData: vector of measured output data used in the system identification +% - realTime: vector of time instant corresponding to the measurements in +% realData +% - modelName: string, name of the simulink model used for +% simulation, this model should include a FMU ME block loaded with +% the appropriate *.fmu file and configured with the appropriate +% outputs, and a toworkspace block saving the output data +% - fmuOutData: cell of strings containing the names of the measured +% output configured in the FMU ME block +% - parameterNames: cell of strings containing the names of the paramet +% -ers to be identified +% - scopeName: string containing the name of the struct saving the +% output data (from toworkspace block) +% - blockName: string containing the name of the FMU ME block +% - Ts: sampling time of the system +% - tf: final time of the simulation +% - methodName : string containing the name of the identification +% method used, use 'pso' (particle swarm), 'ga' (genetic algo.), +% 'naive', 'cg' (conjugate gradient), 'nm' (nelder-meade), +% 'combi' (pso+nm) +% - p0: initial guess for the parameter vector, used by 'fmincon' +% 'nm' and and 'cg' methods, +% - pso_options: struct to be used if methodName = 'pso' ga_options: +% struct to be used if methodName = 'ga' naive_options: struct to be +% used if methodName = 'naive' cg_options: struct to be used if +% - methodName = 'cg' nm_options: struct to be used if methodName = +% 'nm' gaExtOptions: struct to be used if methodName = 'gaExt' +% - psoExtOptions: struct to be used if methodName = 'psoExt' +% - psoExtPath: string leading to the path of the psoopt toolbox to +% be used if and only if methodName = 'psoExt' kn_options. +% - kn_options.path2Knitro: string leading to the path of the psoopt +% toolbox to be used if and only if methodName = 'psoExt' +% fmincon_options +% - kn_options.knOptions: struct to be used if methodName = 'knitro' +% - kn_options.knOptionsFile: string to be used if methodName = 'knitro' +% - path2data: string containing the path to the measured output data +% - dataT: string to evaluate once the file pointed at by path2data +% is loaded in memory to get a row vector containing the time +% instants at which the outputs were measured +% - dataY: string to evaluate once the file pointed at by path2data +% is loaded in memory to get a matrix whose row vectors are the +% different output signals measured +% - t0_fitness: time at which the computation of the objective +% fonction should begin, allows the user to negates the wrong +% initialisation of the system (for example). Should be smaller than +% tf... +% lastSimu: output signals from the last simulation run +% combi_options.firstMethod: first of two methods to be used one +% after the other +% combi_options.firstMethod: second of two methods to be used one +% after the other +% p_min: min value for the parameters +% p_max: max values for the parameters +% intMethod: string containing the name of an integration method, can +% be fixed or variable step method +% path2simulinkModel: path to the simulink model in use +% cost: int giving the type of cost, for now, 2 is quadratic +% objective: struct describing the objective function giving the +% fitness, this object is detailed in rapid_objectiveFunction +% verbose: integer, for now only two levels, on off +% %% +% /!\ fields of settings not to fill in yourself: realData, realTime, +% lastSimu +% See the respective algos for few words on the parameters to provide +% them + + + +%% Check and set the in-data to the model +if ~isempty(RaPIdObject.experimentData.pathToInData) + if exist(RaPIdObject.experimentData.pathToInData,'file') % Indata exist on absolute path + load(RaPIdObject.experimentData.pathToInData); + elseif exist(fullfile(evalin('base','pwd'),RaPIdObject.experimentData.pathToInData),'file') %File exist on relative path + load(fullfile(evalin('base','pwd'),RaPIdObject.experimentData.pathToInData)); + else + error('In-data file could not be found! Use an empty string if no in-data should be loaded!') + end + + try + timeInputT = eval(RaPIdObject.experimentData.expressionInDataTime); + inputT = eval(RaPIdObject.experimentData.expressionInData); + if isrow(timeInputT) + timeInputT=transpose(timeInputT); + end + if length(timeInputT) == size(inputT,1) + inputSignalS = [timeInputT,inputT]; + elseif length(timeInputT) == size(inputT,2) + inputSignalS = [timeInputT,inputT']; + else + error('Check consistency of measured input data.'); + end + RaPIdObject.experimentData.IndataMatrix=inputSignalS; + assignin('base','inputSignalS',inputSignalS) + catch err + disp(err.message); + end +end + +%% Check and set the reference data which will be used for fitness-calculation +if ~isempty(RaPIdObject.experimentData.pathToReferenceData) + if exist(RaPIdObject.experimentData.pathToReferenceData,'file') % Reference data file exist on absolute path + load(RaPIdObject.experimentData.pathToReferenceData); + elseif exist(fullfile(evalin('base','pwd'),RaPIdObject.experimentData.pathToReferenceData),'file') %Reference data file exist on relative path + load(fullfile(evalin('base','pwd'),RaPIdObject.experimentData.pathToReferenceData)); + else + error('No reference file could be found!') + end + try + load(RaPIdObject.experimentData.pathToReferenceData); + timeOutputT=eval(RaPIdObject.experimentData.expressionReferenceTime); + outputT=eval(RaPIdObject.experimentData.expressionReferenceData); + if isrow(timeOutputT) + timeOutputT=transpose(timeOutputT); + end + [timeOutputT, i_t]=unique(timeOutputT); % remove double time-stamps + outputT = outputT(i_t,:); + if length(timeOutputT) == size(outputT,1) + dataMeasuredS = [timeOutputT,outputT]; + elseif length(timeOutputT) == size(outputT,2) + dataMeasuredS = [timeOutputT,transpose(outputT(:,i_t))]; + else + error('Check consistency of output data.'); + end + RaPIdObject.experimentData.referenceTime=dataMeasuredS(:,1); + RaPIdObject.experimentData.referenceOutdata=dataMeasuredS(:,2:end); + assignin('base','dataMeasuredS',dataMeasuredS) + catch err + disp(err.message); + end + +end + +%% Load FMU in either Simulink or in Matlab depending on preferred method +switch RaPIdObject.experimentSettings.solverMode + case 'Simulink' + tmp=[]; + if exist(RaPIdObject.experimentSettings.pathToSimulinkModel,'file') + tmp=RaPIdObject.experimentSettings.pathToSimulinkModel; + elseif ~exist(RaPIdObject.experimentSettings.pathToSimulinkModel,'file') && exist(fullfile(evalin('base','pwd'),RaPIdObject.experimentSettings.pathToSimulinkModel),'file') + tmp=fullfile(evalin('base','pwd'),RaPIdObject.experimentSettings.pathToSimulinkModel); + end + if strcmpi(RaPIdObject.experimentSettings.displayMode, 'hide') + if strcmp(gcs,RaPIdObject.experimentSettings.blockName) % check if model already loaded + tmp_name=tempfile; + close_system(gcs, fullfile(pwd,tmp_name)) % save it as back-up + disp(strcat('Saved opened Simulink model to', fullfile(pwd,tmp_name))) + end + load_system(tmp); + elseif strcmp(RaPIdObject.experimentSettings.displayMode, 'show') && strcmp(gcs,RaPIdObject.experimentSettings.blockName) % check if model already loaded + %NOP, do nothing + else + open_system(tmp); + end + + case 'ODE' + try + if exist(RaPIdObject.experimentSettings.pathToFmuModel,'file') % FMU exist on absolute path + fmu = FMUModelME1(RaPIdObject.experimentSettings.pathToFmuModel,'Loglevel','warning'); % or change to loadFMU? + elseif ~exist(RaPIdObject.experimentSettings.pathToFmuModel,'file') && exist(fullfile(evalin('base','pwd'),RaPIdObject.experimentSettings.pathToFmuModel),'file') %FMU exist on relative path + fmu = FMUModelME1(fullfile(evalin('base','pwd'),RaPIdObject.experimentSettings.pathToFmuModel),'Loglevel','warning'); % or change to loadFMU? + else + error('FMU file could not be found!') + end + catch err + if strcmp(err.message,'Failed load the FMU model. See the log for more details') + error('Failed to load FMU. Check that the FMU is a valid FMI 1.0 Model-Exchange FMU-file') + else + disp(err); + rethrow(err); + end + end +end + +%% Check that fitness objective && post-processing function are OK +if ~isfield(RaPIdObject.experimentSettings,'outputPostProcessing') + RaPIdObject.experimentSettings.outputPostProcessing=@(x)x; % create default function which does nothing +end + +if isrow(RaPIdObject.experimentSettings.objective_weights) % should not be row + RaPIdObject.experimentSettings.objective_weights=transpose(RaPIdObject.experimentSettings.objective_weights); +end + +%% Selecting the chosen opimtization method +switch RaPIdObject.experimentSettings.optimizationAlgorithm + case 'pso' + [sol, historic] = pso_algo(RaPIdObject); + case 'ga' + [ sol, historic] = ga_algo(RaPIdObject); + case 'naive' + sol = naive_algo(RaPIdObject); + historic = []; + case 'cg' + [ sol, historic] = cg_algo(RaPIdObject); + case 'nm' + [ sol, historic ] = nm_algo(RaPIdObject); + case 'combi' + RaPIdObject.experimentSettings.methodName = RaPIdObject.combiSettings.firstMethod; + [sol1,historic1] = rapid( RaPIdObject); + RaPIdObject.experimentSettings.methodName = RaPIdObject.combiSettings.secondMetod; + RaPIdObject.experimentSettings.p_0 = sol1; + [sol,historic2] = rapid(RaPIdObject); + historic.sol1 = sol1; + historic.historic1 = historic1; + historic.historic2 = historic2; + case 'psoExt' + [ sol, historic] = psoExt_algo(RaPIdObject); + case 'gaExt' + [ sol, historic] = gaExt_algo(RaPIdObject); + case 'knitro' + [ sol, historic] = knitro_algo(RaPIdObject); + case 'fmincon' + [ sol, historic] = fmincon_algo(RaPIdObject); + case 'pfNew' + [ sol, historic] = pf_algo(RaPIdObject); + otherwise + errorWrongMethodName +end + +%% Cleaning up after the optimization +switch RaPIdObject.experimentSettings.solverMode + case 'Simulink' + switch RaPIdObject.experimentSettings.displayMode + case 'show' + % NOP + otherwise + close_system(RaPIdObject.experimentSettings.modelName,0) + end + case 'ODE' + if exist('fmu','var') + if fmu.isInstantiated + fmu.fmiFreeModelInstance; + end + delete(fmu) + clearvars fmu + RaPIdObject.fmuHandle=[]; + end + clear rapid_ODEsolve +end +disp(sol) +finishup = onCleanup(@(x)cleanFunc); + +end +function cleanFunc(varargin) + clear(rapid_ODEsolve) + delete(timerfind('Tag', 'ODEtimeout')); +end \ No newline at end of file diff --git a/Sources/core/functions/rapidFunctions/rapid_ODEsolve.m b/Sources/core/functions/rapidFunctions/rapid_ODEsolve.m new file mode 100644 index 0000000..7bc1e99 --- /dev/null +++ b/Sources/core/functions/rapidFunctions/rapid_ODEsolve.m @@ -0,0 +1,124 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [res] = rapid_ODEsolve(newParameters,RaPIdObject) +%RAPID_SIMUSYSTEM Function simulating the FMU by solving it using one of +%the ODE solvers of Matlab. +% +% The settings struct must include: +% parameterNames: cell of strings with all the names of the parameters +% ordered in a way agreeing to the the parameter vector part.p +% +% blockName: string containing the name of the FMU_ME block in the +% simulink model +% scopeName: name of the variable created by the to workspace object +% blockName: name of the FMUme block preceded of the simulink model name +% and of the character "/", example: 'variable/FMUme' +% scopeName: name of the variable created by a "To Workspace" component +% in the simulink model. The To Workspace component must be set to +% generate a structure with time and takes as an input a vector (from a +% mux) containing all outputs. +% This function should never be called, the function FUNC does all the job +% for you +% --------> See the help for FUNC +persistent inputconf outconf + +if isempty(inputconf) + if isprop(RaPIdObject,'fmuInputNames') && iscell(RaPIdObject.fmuInputNames) + for k=1:length(RaPIdObject.fmuInputNames) + inputconf{k}.name=RaPIdObject.fmuInputNames{k}; + inputconf{k}.vec=RaPIdObject.experimentData.IndataMatrix(:,[1,k+1]); + end + outconf.name=RaPIdObject.fmuOutputNames; + else + inputconf=[]; + end +end + +if exist(RaPIdObject.experimentSettings.pathToFmuModel,'file') % FMU exist on absolute path + fmu = FMUModelME1(RaPIdObject.experimentSettings.pathToFmuModel,'Loglevel','warning'); % or change to loadFMU? +elseif ~exist(RaPIdObject.experimentSettings.pathToFmuModel,'file') && exist(fullfile(evalin('base','pwd'),RaPIdObject.experimentSettings.pathToFmuModel),'file') %FMU exist on relative path + fmu = FMUModelME1(fullfile(evalin('base','pwd'),RaPIdObject.experimentSettings.pathToFmuModel),'Loglevel','warning'); % or change to loadFMU? +else + error('FMU file could not be found!') +end + +parameterNames=RaPIdObject.parameterNames; +maxInstantiateAttempts=1; +timeouts=1; +if ~fmu.isInstantiated + for k=1:maxInstantiateAttempts + try + fmu.fmiInstantiateModel + break; + catch err + %disp(err.message) + %pause(timeouts) + end + end + if ~fmu.isInstantiated + tmp=fmu.fmupath; + try + % clearvars('fmu'); + pause(timeouts) + fmu=[]; + fmu=FMUModelME1(tmp); + fmu.fmiInstantiateModel; + catch err + disp('Error while trying to create new fmu?'); + disp(err); + + end + end +end +for l = 1:length(newParameters) + fmu.setValue(parameterNames{l},newParameters(l)); +end +% simulate the system, this is done in the base-workspace + + +try %needs fixes! + apa=fmu.fmiInitialize; + tspan=0:RaPIdObject.experimentSettings.ts:RaPIdObject.experimentSettings.tf; % needs fixing + options=odeset('MaxStep',10*RaPIdObject.experimentSettings.ts,'RelTol', 1^-4 ); % just a temporary hack with ts + [time,res,yname]=fmu.simulate([0 RaPIdObject.experimentSettings.tf],'Output',outconf,'Input',inputconf,'Options',options,'Solver',RaPIdObject.experimentSettings.integrationMethod); + fmu=[]; + if ~isempty(res) + res=RaPIdObject.experimentSettings.postProcessing(res); % this is a user-defined function + end + if isempty(time) + error('please make sure the To Workspace component in the simulink model outputs a struct with time') + end + %% Do something with res here! + realTime=RaPIdObject.experimentData.referenceTime; + res = rapid_interpolate(time,res,realTime); +catch err + if ~strcmp(err.message,'Simulation timed out') + disp(err.message); + end + disp(err) + disp(err) + res=[]; + return; +end +end diff --git a/Sources/core/functions/rapidFunctions/rapid_interpolate.m b/Sources/core/functions/rapidFunctions/rapid_interpolate.m new file mode 100644 index 0000000..f2bd30a --- /dev/null +++ b/Sources/core/functions/rapidFunctions/rapid_interpolate.m @@ -0,0 +1,47 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function interpolatedData = rapid_interpolate(simulationTime,simulationData, referenceTime) +%RAPID_INTERPOLATE generates an interpolation of the simulated data at the +%instants found in the reference measurements. This allows direct comparison of the +%measured data with the simulated data. +% +% Assume everything is in column form +assert(iscolumn(simulationTime),'The time of the simulation is not a column vector.') +assert(size(simulationData,1)==length(simulationTime),'The simulated outdata is not in column form.') + +interpolatedData=zeros(length(referenceTime),size(simulationData,2)); %pre-allocate + +for k = 1:size(simulationData,2) + [simulationTime,i_s] = unique(simulationTime); + try + interpolatedData(:,k)=interp1(simulationTime,simulationData(i_s,k),referenceTime)'; + catch err + disp('error in interpolate, some debug info:') + disp(err) + size(referenceTime) + size(simulationTime) + rethrow(err); + end +end +end \ No newline at end of file diff --git a/Sources/core/functions/rapidFunctions/rapid_objectiveFunction.m b/Sources/core/functions/rapidFunctions/rapid_objectiveFunction.m new file mode 100644 index 0000000..70f07af --- /dev/null +++ b/Sources/core/functions/rapidFunctions/rapid_objectiveFunction.m @@ -0,0 +1,67 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function fitness = rapid_objectiveFunction(referenceResults,simulatedResults,RaPIdObject) +%RAPID_OBJECTIVEFUNCTION computes a fitness according to a fitness criterion +% realRes is data used for matching, from measurments +% simuRes is the data we want to have matching realRes +% the two of them are under the shape [[x[1];y[1]] [x[2];y[2]] ... [x[nStep];y[nStep]]] +% +% settings has to contain the fields +% cost: integer, for quadratic cost the value is 2 +% objective: struct adapted to the method chosen +% if cost = 2, objective contains the field: +% vect: nb_parameters*nb_parameters weight matrix, should take +% into account the respective outputs scaling +% This function should never be called, the function FUNC does all the job +% for you +% --------> See the help for FUNC + + % simuResvector = rapid_interpolate(realTime,simuTime,simuRes); % here we perform the interpolation + % interpolation is need since in most cases the measured output signals + % and the simulated output signals weren't sampled at the same sampling instants. + % after interpolation simuRes contains the simulated output evaluated + % at the same time instant as settings.realTime + +assert(all(size(simulatedResults)==size(referenceResults)),'The size of reference and simulation data is not the same.') + +delta = abs(referenceResults-simulatedResults); +switch RaPIdObject.experimentSettings.cost_type + % Add your case here and set the RaPIdObject accordingly if you + % want to compute the fitness function differently. + case 1, % norm 2 error cost function + fitness = sum(sum(delta.*delta)); + case 2, + weights = RaPIdObject.experimentSettings.objective_weights; + fitness=sum(sum(delta.*delta*weights)); + otherwise + errorWrongCost +end +if (isnan(fitness)) + disp(delta(isnan(delta.*delta))) + error('Something went wrong when calculating the fitness, check the vectors supplied to the objective function'); +end +end + + + diff --git a/Sources/core/functions/rapidFunctions/rapid_simuSystem.m b/Sources/core/functions/rapidFunctions/rapid_simuSystem.m new file mode 100644 index 0000000..0e43949 --- /dev/null +++ b/Sources/core/functions/rapidFunctions/rapid_simuSystem.m @@ -0,0 +1,89 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [res] = rapid_simuSystem(newParameters,RaPIdObject) +%RAPID_SIMUSYSTEM Function simulating the simulink model using the values +%for the parameter vector given as input +% part: particle or chromosome, any kind of object having for field p, a +% vector of parameters of appropriate size settings: settings struct used +% everywhere in RaPId res: matrix whose columns are outputs of the +% simulink model The simulink model should contain a FMI_ME block loaded +% with the appropriate *.fmu file and with the appropriate variables +% selected as outputs +% +% The settings struct must include: +% path2simulinkModel: path to... simulink model +% modelName: sumulink model name without ".mdl" +% parameterNames: cell of strings with all the names of the parameters +% ordered in a way agreeing to the the parameter vector part.p +% +% blockName: string containing the name of the FMU_ME block in the +% simulink model +% scopeName: name of the variable created by the to workspace object +% blockName: name of the FMUme block preceded of the simulink model name +% and of the character "/", example: 'variable/FMUme' +% scopeName: name of the variable created by a "To Workspace" component +% in the simulink model. The To Workspace component must be set to +% generate a structure with time and takes as an input a vector (from a +% mux) containing all outputs. +% This function should never be called, the function FUNC does all the job +% for you +% --------> See the help for FUNC +global nbIterations +parameterName = RaPIdObject.parameterNames; +for l = 1:length(newParameters) + fmuSetValueSimulink(RaPIdObject.experimentSettings.blockName,parameterName{l},num2str(newParameters(l))); % set FMU-block parameters +end + +try +% output=sim(settings.modelName,'SaveOutput','on','OutputSaveName','simout','StartTime','0','FixedStep',num2str(settings.Ts),'StopTime',num2str(settings.tf),'Solver',settings.intMethod,'TimeOut',10, 'LoadExternalInput', 'on','ExternalInput', '[settings.realTime settings.realData]'); + [stuff,output]=evalc('sim(RaPIdObject.experimentSettings.modelName,''SaveOutput'',''on'',''OutputSaveName'',''simout'',''StartTime'',''0'',''FixedStep'',num2str(RaPIdObject.experimentSettings.ts),''StopTime'',num2str(RaPIdObject.experimentSettings.tf),''Solver'',RaPIdObject.experimentSettings.integrationMethod,''TimeOut'',1)'); + if RaPIdObject.experimentSettings.verbose + disp(stuff); + end + tmp=get(output,'simout'); + res=tmp.signals.values; + time=tmp.time; +catch err + if strcmp(err.identifier,'Simulink:Commands:SimTimeExceededTimeOut') + res=[]; + return; + elseif strcmp(err.identifier,'Simulink:SFunctions:SFcnErrorStatus') + res=[]; + return; + + else + disp(err.identifier); + res=[]; + return; + end + %disp(err.message); + %rethrow(err); +end + +if isempty(time) + error('Make sure the To Workspace component in the simulink model outputs a struct with time') +end +res = rapid_interpolate(time,res,RaPIdObject.experimentData.referenceTime); +nbIterations = nbIterations + 1; % debug variable, how many times was the system simulated... +end \ No newline at end of file diff --git a/Sources/core/functions/rapidFunctions/rapid_simuSystem2.m b/Sources/core/functions/rapidFunctions/rapid_simuSystem2.m new file mode 100644 index 0000000..3262963 --- /dev/null +++ b/Sources/core/functions/rapidFunctions/rapid_simuSystem2.m @@ -0,0 +1,182 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function [res,fitness,settings] = rapid_ODEsolve( part,settings ) +%RAPID_SIMUSYSTEM Function simulating the simulink model using the values +%for the parameter vector given as input +% part: particle or chromosome, any kind of object having for field p, a +% vector of parameters of appropriate size settings: settings struct used +% everywhere in RaPId res: matrix whose columns are outputs of the +% simulink model The simulink model should contain a FMI_ME block loaded +% with the appropriate *.fmu file and with the appropriate variables +% selected as outputs +% +% The settings struct must include: +% path2simulinkModel: path to... simulink model +% modelName: sumulink model name without ".mdl" +% parameterNames: cell of strings with all the names of the parameters +% ordered in a way agreeing to the the parameter vector part.p +% +% blockName: string containing the name of the FMU_ME block in the +% simulink model +% scopeName: name of the variable created by the to workspace object +% blockName: name of the FMUme block preceded of the simulink model name +% and of the character "/", example: 'variable/FMUme' +% scopeName: name of the variable created by a "To Workspace" component +% in the simulink model. The To Workspace component must be set to +% generate a structure with time and takes as an input a vector (from a +% mux) containing all outputs. +% This function should never be called, the function FUNC does all the job +% for you +% --------> See the help for FUNC +global fmu +res=[]; +if ~fmu.isInstantiated + fmu.fmiInstantiateModel; + fmu.fmiSetDebugLogging(true) +end +T=timer('StartDelay',10, 'Period', 10.0,'ExecutionMode','singleShot'); +T.TimerFcn={@mycallback,T}; +cleanupObj = onCleanup(@()mycleanupfunc(T)); +for l = 1:length(part.p) + parameterName = settings.parameterNames(l); + p = part.p(l); + fmu.setValue(parameterName,p); +end +% simulate the system, this is done in the workspace of rapid.m where the +% simulation settings were defineds +outconf.name=settings.fmuOutData; +try + start(T) + fmu.fmiInitialize; +fmu.getValue(parameterName); +tspan=[0:settings.Ts*20:settings.tf]; +options=odeset('MaxStep',settings.Ts*20,'RelTol', 1^-3 ); +time=[]; +[time,yout,yname]=fmu.simulate(tspan,'Output',outconf,'Options',options); +stop(T) + + +if isempty(time) + error('please make sure the To Workspace component in the simulink model outputs a struct with time') +end + +res(:,1)=yout(:,1); +res(:,2)=yout(:,2); +res(:,3)=yout(:,3); +res(:,4)=yout(:,4); +res(:,5)=yout(:,5); +res(:,6)=yout(:,6); +res(:,7)=yout(:,7); +res(:,8)=yout(:,8); + +% res(:,7)=yout(:,7).*yout(:,9)+yout(:,8).*yout(:,10); +% res(:,8)=yout(:,8).*yout(:,9)-yout(:,7).*yout(:,10); + +% res(:,1)=yout(:,1).*yout(:,3)+yout(:,2).*yout(:,4); +% res(:,2)=yout(:,2).*yout(:,3)-yout(:,1).*yout(:,4); +% res(:,3)=sqrt(yout(:,5).^2 +yout(:,6).^2); +% res(:,4)=sqrt(yout(:,7).^2 +yout(:,8).^2); + +simuTime=time'; +settings.lastSimu.res = res'; +fitness=0; +realRes=settings.realData; +realTime=settings.realTime; +k = find(realTime>=settings.t0_fitness,1); % we remove the samples preceding the time t0_fitness, these first samples ain't taken into account in the computation of the fitness +realRes = realRes(:,k:end); +realTime = realTime(:,k:end); +l=find(simuTime>=settings.t0_fitness,1); +simuRes = res(:,l:end)'; +simuTime = simuTime(:,l:end); + + +if (simuTime(end)= 3 + T=varargin{3}; + else + T=obj; + end + strcmp(obj.Name,T.Name) + nargin + stop(obj) + c=(clock); + if fmu.isInstantiated + disp([num2str(c(4)) ':' num2str(c(5)) ':' num2str(c(6)) ': Simulation timed-out?']) + warning('off', 'FMIT:MEX:CallfmiTerminate'); + output=fmu.fmi_terminate(); + disp(num2str(output)) + warning('on', 'FMIT:MEX:CallfmiTerminate'); + fmu.fmiFreeModelInstance; + fmu.fmi_error('something'); + %error('Simulation timed out'); + end +end +function mycleanupfunc(T,varargin) + if ~isempty(T) + stop(T) + delete(T) + end +end diff --git a/Sources/core/init/data.mat b/Sources/core/init/data.mat new file mode 100644 index 0000000..fd6a796 Binary files /dev/null and b/Sources/core/init/data.mat differ diff --git a/Sources/core/init/dataMeasuredS.mat b/Sources/core/init/dataMeasuredS.mat new file mode 100644 index 0000000..e2bd004 Binary files /dev/null and b/Sources/core/init/dataMeasuredS.mat differ diff --git a/Sources/core/init/err.mat b/Sources/core/init/err.mat new file mode 100644 index 0000000..7570df9 Binary files /dev/null and b/Sources/core/init/err.mat differ diff --git a/Sources/core/init/inputSignalS.mat b/Sources/core/init/inputSignalS.mat new file mode 100644 index 0000000..51e273b Binary files /dev/null and b/Sources/core/init/inputSignalS.mat differ diff --git a/Sources/core/init/sol.mat b/Sources/core/init/sol.mat new file mode 100644 index 0000000..4ece144 Binary files /dev/null and b/Sources/core/init/sol.mat differ diff --git a/Sources/data.mat b/Sources/data.mat new file mode 100644 index 0000000..3873888 Binary files /dev/null and b/Sources/data.mat differ diff --git a/Sources/getPathToRapid.m b/Sources/getPathToRapid.m new file mode 100644 index 0000000..bb72b8c --- /dev/null +++ b/Sources/getPathToRapid.m @@ -0,0 +1,34 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function pathstring = getPathToRapid() +%getPathToRapid returns the path to the root of the RaPId folder +% Detailed explanation goes here +tryathstring=fileparts(mfilename('fullpath')); + +catch + p err + disp(err.message); + error('Check that RaPiD is installed correctly!'); +end + diff --git a/Sources/gui/gaSettings.fig b/Sources/gui/gaSettings.fig new file mode 100644 index 0000000..2a5e5c8 Binary files /dev/null and b/Sources/gui/gaSettings.fig differ diff --git a/Sources/gui/gaSettings.m b/Sources/gui/gaSettings.m new file mode 100644 index 0000000..9993563 --- /dev/null +++ b/Sources/gui/gaSettings.m @@ -0,0 +1,416 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +function varargout = gaSettings(varargin) +% GASETTINGS MATLAB code for gaSettings.fig +% GASETTINGS, by itself, creates a new GASETTINGS or raises the existing +% singleton*. +% +% H = GASETTINGS returns the handle to a new GASETTINGS or the handle to +% the existing singleton*. +% +% GASETTINGS('CALLBACK',hObject,eventData,handles,...) calls the local +% function named CALLBACK in GASETTINGS.M with the given input arguments. +% +% GASETTINGS('Property','Value',...) creates a new GASETTINGS or raises the +% existing singleton*. Starting from the left, property value pairs are +% applied to the GUI before gaSettings_OpeningFcn gets called. An +% unrecognized property name or invalid value makes property application +% stop. All inputs are passed to gaSettings_OpeningFcn via varargin. +% +% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one +% instance to run (singleton)". +% +% See also: GUIDE, GUIDATA, GUIHANDLES + +% Edit the above text to modify the response to help gaSettings + +% Last Modified by GUIDE v2.5 22-May-2013 11:24:01 + +% Begin initialization code - DO NOT EDIT +gui_Singleton = 1; +gui_State = struct('gui_Name', mfilename, ... + 'gui_Singleton', gui_Singleton, ... + 'gui_OpeningFcn', @gaSettings_OpeningFcn, ... + 'gui_OutputFcn', @gaSettings_OutputFcn, ... + 'gui_LayoutFcn', [] , ... + 'gui_Callback', []); +if nargin && ischar(varargin{1}) + gui_State.gui_Callback = str2func(varargin{1}); +end + +if nargout + [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); +else + gui_mainfcn(gui_State, varargin{:}); +end +% End initialization code - DO NOT EDIT + + +% --- Executes just before gaSettings is made visible. +function gaSettings_OpeningFcn(hObject, eventdata, handles, varargin) +% This function has no output args, see OutputFcn. +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +% varargin command line arguments to gaSettings (see VARARGIN) + +% Choose default command line output for gaSettings +handles.output = hObject; + +% Update handles structure +guidata(hObject, handles); +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +ga_options=RaPIdObject.gaSettings; +try + set(handles.edit1,'String',ga_options.nbCromosomes); + set(handles.edit2,'String',ga_options.nbCroossOver1); + set(handles.edit3,'String',ga_options.nbCroossOver2); + set(handles.edit4,'String',ga_options.nbMutations); + set(handles.edit5,'String',ga_options.nbReproduction); + set(handles.edit6,'String',ga_options.limit); + set(handles.edit7,'String',ga_options.fitnessStopRatio); + set(handles.edit8,'String',ga_options.headSize1); + set(handles.edit9,'String',ga_options.headSize2); + set(handles.edit10,'String',ga_options.headSize3); + set(handles.edit11,'String',ga_options.nbReinjection); + set(handles.edit13,'String',ga_options.nRandMin); +catch error + disp(error.message); +end + + + +% UIWAIT makes gaSettings wait for user response (see UIRESUME) +% uiwait(handles.figure1); + + +% --- Outputs from this function are returned to the command line. +function varargout = gaSettings_OutputFcn(hObject, eventdata, handles) +% varargout cell array for returning output args (see VARARGOUT); +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Get default command line output from handles structure +varargout{1} = handles.output; + + + +function edit1_Callback(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit1 as text +% str2double(get(hObject,'String')) returns contents of edit1 as a double + + +% --- Executes during object creation, after setting all properties. +function edit1_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit2_Callback(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit2 as text +% str2double(get(hObject,'String')) returns contents of edit2 as a double + + +% --- Executes during object creation, after setting all properties. +function edit2_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit3_Callback(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit3 as text +% str2double(get(hObject,'String')) returns contents of edit3 as a double + + +% --- Executes during object creation, after setting all properties. +function edit3_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit4_Callback(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit4 as text +% str2double(get(hObject,'String')) returns contents of edit4 as a double + + +% --- Executes during object creation, after setting all properties. +function edit4_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit5_Callback(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit5 as text +% str2double(get(hObject,'String')) returns contents of edit5 as a double + + +% --- Executes during object creation, after setting all properties. +function edit5_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit6_Callback(hObject, eventdata, handles) +% hObject handle to edit6 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit6 as text +% str2double(get(hObject,'String')) returns contents of edit6 as a double + + +% --- Executes during object creation, after setting all properties. +function edit6_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit6 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit7_Callback(hObject, eventdata, handles) +% hObject handle to edit7 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit7 as text +% str2double(get(hObject,'String')) returns contents of edit7 as a double + + +% --- Executes during object creation, after setting all properties. +function edit7_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit7 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit8_Callback(hObject, eventdata, handles) +% hObject handle to edit8 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit8 as text +% str2double(get(hObject,'String')) returns contents of edit8 as a double + + +% --- Executes during object creation, after setting all properties. +function edit8_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit8 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit9_Callback(hObject, eventdata, handles) +% hObject handle to edit9 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit9 as text +% str2double(get(hObject,'String')) returns contents of edit9 as a double + + +% --- Executes during object creation, after setting all properties. +function edit9_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit9 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit10_Callback(hObject, eventdata, handles) +% hObject handle to edit10 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit10 as text +% str2double(get(hObject,'String')) returns contents of edit10 as a double + + +% --- Executes during object creation, after setting all properties. +function edit10_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit10 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit11_Callback(hObject, eventdata, handles) +% hObject handle to edit11 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit11 as text +% str2double(get(hObject,'String')) returns contents of edit11 as a double + + +% --- Executes during object creation, after setting all properties. +function edit11_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit11 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in pushbutton1. +function pushbutton1_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +ga_options.nbCromosomes = eval(get(handles.edit1,'String')); +ga_options.nbCroossOver1 = eval(get(handles.edit2,'String')); +ga_options.nbCroossOver2 = eval(get(handles.edit3,'String')); +ga_options.nbMutations = eval(get(handles.edit4,'String')); +ga_options.nbReproduction = eval(get(handles.edit5,'String')); +ga_options.limit = eval(get(handles.edit6,'String')); +ga_options.fitnessStopRatio = eval(get(handles.edit7,'String')); +ga_options.headSize1 = eval(get(handles.edit8,'String')); +ga_options.headSize2 = eval(get(handles.edit9,'String')); +ga_options.headSize3 = eval(get(handles.edit10,'String')); +ga_options.nbReinjection = eval(get(handles.edit11,'String')); +ga_options.nRandMin = eval(get(handles.edit13,'String')); +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +RaPIdObject.gaSettings=ga_options; +close(gcf) + + + +function edit13_Callback(hObject, eventdata, handles) +% hObject handle to edit13 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit13 as text +% str2double(get(hObject,'String')) returns contents of edit13 as a double + + +% --- Executes during object creation, after setting all properties. +function edit13_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit13 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end diff --git a/Sources/gui/generalSettings.fig b/Sources/gui/generalSettings.fig new file mode 100644 index 0000000..13ef7b6 Binary files /dev/null and b/Sources/gui/generalSettings.fig differ diff --git a/Sources/gui/generalSettings.m b/Sources/gui/generalSettings.m new file mode 100644 index 0000000..ffcfa9a --- /dev/null +++ b/Sources/gui/generalSettings.m @@ -0,0 +1,792 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + + +function varargout = generalSettings(varargin) +% GENERALSETTINGS MATLAB code for generalSettings.fig +% GENERALSETTINGS, by itself, creates a new GENERALSETTINGS or raises the existing +% singleton*. +% +% H = GENERALSETTINGS returns the handle to a new GENERALSETTINGS or the handle to +% the existing singleton*. +% +% GENERALSETTINGS('CALLBACK',hObject,eventData,handles,...) calls the local +% function named CALLBACK in GENERALSETTINGS.M with the given input arguments. +% +% GENERALSETTINGS('Property','Value',...) creates a new GENERALSETTINGS or raises the +% existing singleton*. Starting from the left, property value pairs are +% applied to the GUI before generalSettings_OpeningFcn gets called. An +% unrecognized property name or invalid value makes property application +% stop. All inputs are passed to generalSettings_OpeningFcn via varargin. +% +% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one +% instance to run (singleton)". +% +% See also: GUIDE, GUIDATA, GUIHANDLES + +% Edit the above text to modify the response to help generalSettings + +% Last Modified by GUIDE v2.5 09-Sep-2015 21:22:00 + +% Begin initialization code - DO NOT EDIT +gui_Singleton = 1; +gui_State = struct('gui_Name', mfilename, ... + 'gui_Singleton', gui_Singleton, ... + 'gui_OpeningFcn', @generalSettings_OpeningFcn, ... + 'gui_OutputFcn', @generalSettings_OutputFcn, ... + 'gui_LayoutFcn', [] , ... + 'gui_Callback', []); +if nargin && ischar(varargin{1}) + gui_State.gui_Callback = str2func(varargin{1}); +end + +if nargout + [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); +else + gui_mainfcn(gui_State, varargin{:}); +end +% End initialization code - DO NOT EDIT + + +% --- Executes just before generalSettings is made visible. +function generalSettings_OpeningFcn(hObject, eventdata, handles, varargin) +% This function has no output args, see OutputFcn. +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +% varargin command line arguments to generalSettings (see VARARGIN) + +% Choose default command line output for generalSettings +handles.output = hObject; + +% Update handles structure +guidata(hObject, handles); + +% UIWAIT makes generalSettings wait for user response (see UIRESUME) +% uiwait(handles.figure1); +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +set(handles.edit1,'String',RaPIdObject.experimentSettings.ts); +set(handles.edit2,'String',RaPIdObject.experimentSettings.tf); +set(handles.edit11,'String',RaPIdObject.experimentSettings.integrationMethod); +set(handles.togglebutton1,'Value',RaPIdObject.experimentSettings.saveHist); +set(handles.edit9,'String',num2str(RaPIdObject.experimentSettings.cost_type)); +dummy=cellstr(['';'']); %make sure that we have no empty cell arrays +if ~isempty(RaPIdObject.fmuInputNames) + tmp1=(RaPIdObject.fmuInputNames); +else + tmp1=dummy; +end +if ~isfield(RaPIdObject.experimentSettings,'objective') || isfield(RaPIdObject.experimentSettings.objective,'vect') + tmp7=num2cell(RaPIdObject.experimentSettings.objective.vect); +else + tmp7=[]; +end +maxAlloc=max([length(tmp1),length(RaPIdObject.fmuOutputNames),length(RaPIdObject.parameterNames)])+1; %allocate space for the longest vector and and an extra editable field +dataAlloc=cell(7,maxAlloc); +dataAlloc(1,1:length(tmp1))=tmp1; +dataAlloc(2,1:length(RaPIdObject.fmuOutputNames))=RaPIdObject.fmuOutputNames; +dataAlloc(3,1:length(RaPIdObject.parameterNames))=RaPIdObject.parameterNames; +dataAlloc(4,1:length(RaPIdObject.experimentSettings.p_min))=num2cell(RaPIdObject.experimentSettings.p_min); +dataAlloc(5,1:length(RaPIdObject.experimentSettings.p_max))=num2cell(RaPIdObject.experimentSettings.p_max); +dataAlloc(6,1:length(RaPIdObject.experimentSettings.p_0))=num2cell(RaPIdObject.experimentSettings.p_0); +dataAlloc(7,1:length(tmp7))=tmp7; +set(handles.InputNames,'Data',dataAlloc); +set(handles.InputNames,'ColumnEditable',true(ones(1,maxAlloc))); +tmp8=cell([1,maxAlloc]); +tmp8=cellfun(@(x){'char'},tmp8); +set(handles.InputNames,'ColumnFormat',tmp8); +if (get(handles.togglebutton1,'Value'))==1 + set(handles.togglebutton1,'String','Save History: On') +else + set(handles.togglebutton1,'String','Save History: Off') +end +if RaPIdObject.experimentSettings.verbose==1 + tmp2=1; +else + tmp2=0; +end + +set(handles.verbose,'Value',tmp2); +if (get(handles.verbose,'Value'))==1 + set(handles.verbose,'String','Verbose: On') +else + set(handles.verbose,'String','Verbose: Off') +end +try + set(handles.edit16,'String',int2str(RaPIdObject.experimentSettings.maxIterations)) +end +try + set(handles.edit14,'String',mat2str(RaPIdObject.experimentSettings.objective.vect)); +end +try + set(handles.edit15,'String',num2str(RaPIdObject.experimentSettings.t_fitness_start)); +end + + + + + +% --- Outputs from this function are returned to the command line. +function varargout = generalSettings_OutputFcn(hObject, eventdata, handles) +% varargout cell array for returning output args (see VARARGOUT); +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Get default command line output from handles structure +varargout{1} = handles.output; + + + +function edit1_Callback(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit1 as text +% str2double(get(hObject,'String')) returns contents of edit1 as a double + + +% --- Executes during object creation, after setting all properties. +function edit1_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit2_Callback(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit2 as text +% str2double(get(hObject,'String')) returns contents of edit2 as a double + + +% --- Executes during object creation, after setting all properties. +function edit2_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit3_Callback(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit3 as text +% str2double(get(hObject,'String')) returns contents of edit3 as a double + + +% --- Executes during object creation, after setting all properties. +function edit3_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit4_Callback(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit4 as text +% str2double(get(hObject,'String')) returns contents of edit4 as a double + + +% --- Executes during object creation, after setting all properties. +function edit4_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit5_Callback(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit5 as text +% str2double(get(hObject,'String')) returns contents of edit5 as a double + + +% --- Executes during object creation, after setting all properties. +function edit5_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit6_Callback(hObject, eventdata, handles) +% hObject handle to edit6 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit6 as text +% str2double(get(hObject,'String')) returns contents of edit6 as a double + + +% --- Executes during object creation, after setting all properties. +function edit6_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit6 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit7_Callback(hObject, eventdata, handles) +% hObject handle to edit7 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit7 as text +% str2double(get(hObject,'String')) returns contents of edit7 as a double + + +% --- Executes during object creation, after setting all properties. +function edit7_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit7 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit8_Callback(hObject, eventdata, handles) +% hObject handle to edit8 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit8 as text +% str2double(get(hObject,'String')) returns contents of edit8 as a double + + +% --- Executes during object creation, after setting all properties. +function edit8_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit8 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit9_Callback(hObject, eventdata, handles) +% hObject handle to edit9 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit9 as text +% str2double(get(hObject,'String')) returns contents of edit9 as a double + + +% --- Executes during object creation, after setting all properties. +function edit9_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit9 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit10_Callback(hObject, eventdata, handles) +% hObject handle to edit10 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit10 as text +% str2double(get(hObject,'String')) returns contents of edit10 as a double + + +% --- Executes during object creation, after setting all properties. +function edit10_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit10 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit11_Callback(hObject, eventdata, handles) +% hObject handle to edit11 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit11 as text +% str2double(get(hObject,'String')) returns contents of edit11 as a double + + +% --- Executes during object creation, after setting all properties. +function edit11_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit11 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on selection change in listbox1. +function listbox1_Callback(hObject, eventdata, handles) +% hObject handle to listbox1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: contents = cellstr(get(hObject,'String')) returns listbox1 contents as cell array +% contents{get(hObject,'Value')} returns selected item from listbox1 + + +% --- Executes during object creation, after setting all properties. +function listbox1_CreateFcn(hObject, eventdata, handles) +% hObject handle to listbox1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: listbox controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on selection change in listbox2. +function listbox2_Callback(hObject, eventdata, handles) +% hObject handle to listbox2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: contents = cellstr(get(hObject,'String')) returns listbox2 contents as cell array +% contents{get(hObject,'Value')} returns selected item from listbox2 + + +% --- Executes during object creation, after setting all properties. +function listbox2_CreateFcn(hObject, eventdata, handles) +% hObject handle to listbox2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: listbox controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on selection change in listbox3. +function listbox3_Callback(hObject, eventdata, handles) +% hObject handle to listbox3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: contents = cellstr(get(hObject,'String')) returns listbox3 contents as cell array +% contents{get(hObject,'Value')} returns selected item from listbox3 + + +% --- Executes during object creation, after setting all properties. +function listbox3_CreateFcn(hObject, eventdata, handles) +% hObject handle to listbox3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: listbox controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on selection change in listbox4. +function listbox4_Callback(hObject, eventdata, handles) +% hObject handle to listbox4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: contents = cellstr(get(hObject,'String')) returns listbox4 contents as cell array +% contents{get(hObject,'Value')} returns selected item from listbox4 + + +% --- Executes during object creation, after setting all properties. +function listbox4_CreateFcn(hObject, eventdata, handles) +% hObject handle to listbox4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: listbox controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on selection change in popupmenu2. +function popupmenu2_Callback(hObject, eventdata, handles) +% hObject handle to popupmenu2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: contents = cellstr(get(hObject,'String')) returns popupmenu2 contents as cell array +% contents{get(hObject,'Value')} returns selected item from popupmenu2 + + +% --- Executes during object creation, after setting all properties. +function popupmenu2_CreateFcn(hObject, eventdata, handles) +% hObject handle to popupmenu2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: popupmenu controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on selection change in popupmenu3. +function popupmenu3_Callback(hObject, eventdata, handles) +% hObject handle to popupmenu3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: contents = cellstr(get(hObject,'String')) returns popupmenu3 contents as cell array +% contents{get(hObject,'Value')} returns selected item from popupmenu3 + + +% --- Executes during object creation, after setting all properties. +function popupmenu3_CreateFcn(hObject, eventdata, handles) +% hObject handle to popupmenu3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: popupmenu controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on selection change in popupmenu4. +function popupmenu4_Callback(hObject, eventdata, handles) +% hObject handle to popupmenu4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: contents = cellstr(get(hObject,'String')) returns popupmenu4 contents as cell array +% contents{get(hObject,'Value')} returns selected item from popupmenu4 + + +% --- Executes during object creation, after setting all properties. +function popupmenu4_CreateFcn(hObject, eventdata, handles) +% hObject handle to popupmenu4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: popupmenu controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on selection change in popupmenu5. +function popupmenu5_Callback(hObject, eventdata, handles) +% hObject handle to popupmenu5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: contents = cellstr(get(hObject,'String')) returns popupmenu5 contents as cell array +% contents{get(hObject,'Value')} returns selected item from popupmenu5 + + +% --- Executes during object creation, after setting all properties. +function popupmenu5_CreateFcn(hObject, eventdata, handles) +% hObject handle to popupmenu5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: popupmenu controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in pushbutton1. +function pushbutton1_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +settings2.ts = eval(get(handles.edit1,'String')); +settings2.tf = eval(get(handles.edit2,'String')); +settings2.verbose = get(handles.verbose,'Value'); +settings2.cost_type = str2num(get(handles.edit9,'String')); +settings2.integrationMethod = get(handles.edit11,'String'); +settings2.maxIterations = str2double(get(handles.edit16,'String')); +settings2.t_fitness_start = (get(handles.edit15,'String')); +settings2.saveHist=get(handles.togglebutton1,'Value'); +tmp=get(handles.InputNames,'Data'); +RaPIdObject.fmuInputNames = tmp(1,~cellfun(@isempty,tmp(1,:))); +RaPIdObject.fmuOutputNames = tmp(2,~cellfun(@isempty,tmp(2,:))); +RaPIdObject.parameterNames = tmp(3,~cellfun(@isempty,tmp(3,:))); +settings2.p_min = cell2mat(tmp(4,~cellfun(@isempty,tmp(4,:)))); +settings2.p_max = cell2mat(tmp(5,~cellfun(@isempty,tmp(5,:)))); +settings2.p_0 = cell2mat(tmp(6,~cellfun(@isempty,tmp(6,:)))); +settings2.objective.vect = cell2mat(tmp(7,~cellfun(@isempty,tmp(7,:)))); +RaPIdObject.experimentSettings = setstructfields(RaPIdObject.experimentSettings,settings2); +close(handles.figure1) + + + +function edit13_Callback(hObject, eventdata, handles) +% hObject handle to edit13 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit13 as text +% str2double(get(hObject,'String')) returns contents of edit13 as a double + + +% --- Executes during object creation, after setting all properties. +function edit13_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit13 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit14_Callback(hObject, eventdata, handles) +% hObject handle to edit14 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit14 as text +% str2double(get(hObject,'String')) returns contents of edit14 as a double + + +% --- Executes during object creation, after setting all properties. +function edit14_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit14 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit15_Callback(hObject, eventdata, handles) +% hObject handle to edit15 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit15 as text +% str2double(get(hObject,'String')) returns contents of edit15 as a double + + +% --- Executes during object creation, after setting all properties. +function edit15_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit15 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit16_Callback(hObject, eventdata, handles) +% hObject handle to edit16 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit16 as text +% str2double(get(hObject,'String')) returns contents of edit16 as a double + + +% --- Executes during object creation, after setting all properties. +function edit16_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit16 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in togglebutton1. +function togglebutton1_Callback(hObject, eventdata, handles) +% hObject handle to togglebutton1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hint: get(hObject,'Value') returns toggle state of togglebutton1 +if get(hObject,'Value')==1 + set(hObject,'String','Save History: On') +else + set(hObject,'String','Save History: Off') +end + + + +% --- Executes on button press in verbose. +function verbose_Callback(hObject, eventdata, handles) +% hObject handle to verbose (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hint: get(hObject,'Value') returns toggle state of verbose +if get(hObject,'Value')==1 + set(hObject,'String','Save History: On') +else + set(hObject,'String','Save History: Off') +end + + +% --- Executes when entered data in editable cell(s) in InputNames. +function InputNames_CellEditCallback(hObject, eventdata, handles) +% hObject handle to InputNames (see GCBO) +% eventdata structure with the following fields (see UITABLE) +% Indices: row and column indices of the cell(s) edited +% PreviousData: previous data for the cell(s) edited +% EditData: string(s) entered by the user +% NewData: EditData or its converted form set on the Data property. Empty if Data was not changed +% Error: error string when failed to convert EditData to appropriate value for Data +% handles structure with handles and user data (see GUIDATA) +indices=eventdata.Indices; +theData=get(hObject,'Data'); +% for some reason the table wants to convert to num often?? Taking care of +% it below + +%if non-empty string entered +if ~isempty(eventdata.EditData) + % if the line is supposed to be text + if any([1,2,3]==indices(1)) + theData(indices(1),indices(2))={eventdata.EditData}; + %expand table + if size(theData,2)==indices(2) + set(hObject,'ColumnEditable',true(ones(1,indices(2)+1))); + set(hObject,'Data',[theData {'';'';'';[];[];[];[]}]); + set(handles.InputNames,'ColumnFormat',[get(handles.InputNames,'ColumnFormat') 'char']); + else + set(hObject,'Data',theData); + end + else + if size(theData,2)==indices(2) + set(hObject,'ColumnEditable',true(ones(1,indices(2)+1))); + set(hObject,'Data',[theData {'';'';'';[];[];[];[]}]); + set(handles.InputNames,'ColumnFormat',[get(handles.InputNames,'ColumnFormat') 'char']); + end + end +else + if size(theData,2)==indices(2) + theData{indices(1),indices(2)}=[]; + if all(cellfun(@isempty,theData(indices(1),:))) + theData(:,indices(2))=[]; + end + set(hObject,'ColumnEditable',true(ones(1,length(theData)))); + else + theData{indices(1),indices(2)}=[]; + end + set(hObject,'Data',theData); +end diff --git a/Sources/gui/generateFmu.fig b/Sources/gui/generateFmu.fig new file mode 100644 index 0000000..89c825f Binary files /dev/null and b/Sources/gui/generateFmu.fig differ diff --git a/Sources/gui/generateFmu.m b/Sources/gui/generateFmu.m new file mode 100644 index 0000000..3a3f3a7 --- /dev/null +++ b/Sources/gui/generateFmu.m @@ -0,0 +1,246 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + + +function varargout = generateFmu(varargin) +% GENERATEFMU MATLAB code for generateFmu.fig +% GENERATEFMU, by itself, creates a new GENERATEFMU or raises the existing +% singleton*. +% +% H = GENERATEFMU returns the handle to a new GENERATEFMU or the handle to +% the existing singleton*. +% +% GENERATEFMU('CALLBACK',hObject,eventData,handles,...) calls the local +% function named CALLBACK in GENERATEFMU.M with the given input arguments. +% +% GENERATEFMU('Property','Value',...) creates a new GENERATEFMU or raises the +% existing singleton*. Starting from the left, property value pairs are +% applied to the GUI before generateFmu_OpeningFcn gets called. An +% unrecognized property name or invalid value makes property application +% stop. All inputs are passed to generateFmu_OpeningFcn via varargin. +% +% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one +% instance to run (singleton)". +% +% See also: GUIDE, GUIDATA, GUIHANDLES + +% Edit the above text to modify the response to help generateFmu + +% Last Modified by GUIDE v2.5 10-Aug-2015 17:58:20 + +% Begin initialization code - DO NOT EDIT +gui_Singleton = 1; +gui_State = struct('gui_Name', mfilename, ... + 'gui_Singleton', gui_Singleton, ... + 'gui_OpeningFcn', @generateFmu_OpeningFcn, ... + 'gui_OutputFcn', @generateFmu_OutputFcn, ... + 'gui_LayoutFcn', [] , ... + 'gui_Callback', []); +if nargin && ischar(varargin{1}) + gui_State.gui_Callback = str2func(varargin{1}); +end + +if nargout + [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); +else + gui_mainfcn(gui_State, varargin{:}); +end +% End initialization code - DO NOT EDIT + + +% --- Executes just before generateFmu is made visible. +function generateFmu_OpeningFcn(hObject, eventdata, handles, varargin) +% This function has no output args, see OutputFcn. +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +% varargin command line arguments to generateFmu (see VARARGIN) + +% Choose default command line output for generateFmu +handles.output = hObject; + +% Update handles structure +guidata(hObject, handles); +load('dataFmu'); +set(handles.edit1,'String',datafmu.edit1); +set(handles.edit2,'String',datafmu.edit2); +set(handles.edit4,'String',datafmu.edit4); + +% UIWAIT makes generateFmu wait for user response (see UIRESUME) +% uiwait(handles.generateFMU); + + +% --- Outputs from this function are returned to the command line. +function varargout = generateFmu_OutputFcn(hObject, eventdata, handles) +% varargout cell array for returning output args (see VARARGOUT); +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Get default command line output from handles structure +varargout{1} = handles.output; + + +% --- Executes on button press in pushbutton1. +function pushbutton1_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +[filename, pathname] = uigetfile('*.mo','modelica file','MultiSelect','on'); +set(handles.edit1,'String',strcat(pathname,filename)); + +% --- Executes on button press in pushbutton2. +function pushbutton2_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +pathname = uigetdir; +set(handles.edit2,'String',pathname); + + +function edit1_Callback(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit1 as text +% str2double(get(hObject,'String')) returns contents of edit1 as a double + + +% --- Executes during object creation, after setting all properties. +function edit1_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit2_Callback(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit2 as text +% str2double(get(hObject,'String')) returns contents of edit2 as a double + + +% --- Executes during object creation, after setting all properties. +function edit2_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit3_Callback(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit3 as text +% str2double(get(hObject,'String')) returns contents of edit3 as a double + + +% --- Executes during object creation, after setting all properties. +function edit3_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in pushbutton3. +function pushbutton3_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +datafmu.edit1 = get(handles.edit1,'String'); +datafmu.edit2 = get(handles.edit2,'String'); +% data.edit3 = get(handles.edit3,'String'); +datafmu.edit4 = get(handles.edit4,'String'); + + +save('gui\dataFmu.mat','datafmu'); +% addpath(genpath(get(handles.edit5,'String'))); +DymolaChannel = ddeinit('dymola', ' '); +if DymolaChannel == 0 +winopen(get(handles.edit1,'String')); +pause(5); +DymolaChannel = ddeinit('dymola', ' '); +end + + +% dymola(strcat('openModel(','"',get(handles.edit1,'String'),'"',')')); +% dymola(strcat('cd("',get(handles.edit2,'String'),'")')); +% dymola(strcat('translateModelFMU("', get(handles.edit4,'String'), '", false, "", "1", "me", false);')); +str = get(handles.edit4,'String'); +% dymola(strcat('translateModelFMU("',str{1},'", false, "", "1", "me", false);')); +% ddeexec(DymolaChannel, strcat('openModel(','"',get(handles.edit1,'String'),'"',')'), '', 1000000); +ddeexec(DymolaChannel, strcat('cd("',get(handles.edit2,'String'),'")'), '', 1000000); +ddeexec(DymolaChannel, strcat('translateModelFMU("',str{1},'", false, "", "1", "me", false);'), '', 1000000); +evalin('base','sprintf(''%s'',''compilation of the fmu succeeded'')'); +ddeterm(DymolaChannel); + +function edit4_Callback(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit4 as text +% str2double(get(hObject,'String')) returns contents of edit4 as a double + + +% --- Executes during object creation, after setting all properties. +function edit4_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + + + + diff --git a/Sources/gui/logoz.jpg b/Sources/gui/logoz.jpg new file mode 100644 index 0000000..70a53a4 Binary files /dev/null and b/Sources/gui/logoz.jpg differ diff --git a/Sources/gui/logoz.png b/Sources/gui/logoz.png new file mode 100644 index 0000000..f5046e0 Binary files /dev/null and b/Sources/gui/logoz.png differ diff --git a/Sources/gui/logoz.tiff b/Sources/gui/logoz.tiff new file mode 100644 index 0000000..c0c456e Binary files /dev/null and b/Sources/gui/logoz.tiff differ diff --git a/Sources/gui/naiveSettings.fig b/Sources/gui/naiveSettings.fig new file mode 100644 index 0000000..b788b6c Binary files /dev/null and b/Sources/gui/naiveSettings.fig differ diff --git a/Sources/gui/naiveSettings.m b/Sources/gui/naiveSettings.m new file mode 100644 index 0000000..175ead1 --- /dev/null +++ b/Sources/gui/naiveSettings.m @@ -0,0 +1,240 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + + +function varargout = naiveSettings(varargin) +% NAIVESETTINGS MATLAB code for naiveSettings.fig +% NAIVESETTINGS, by itself, creates a new NAIVESETTINGS or raises the existing +% singleton*. +% +% H = NAIVESETTINGS returns the handle to a new NAIVESETTINGS or the handle to +% the existing singleton*. +% +% NAIVESETTINGS('CALLBACK',hObject,eventData,handles,...) calls the local +% function named CALLBACK in NAIVESETTINGS.M with the given input arguments. +% +% NAIVESETTINGS('Property','Value',...) creates a new NAIVESETTINGS or raises the +% existing singleton*. Starting from the left, property value pairs are +% applied to the GUI before naiveSettings_OpeningFcn gets called. An +% unrecognized property name or invalid value makes property application +% stop. All inputs are passed to naiveSettings_OpeningFcn via varargin. +% +% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one +% instance to run (singleton)". +% +% See also: GUIDE, GUIDATA, GUIHANDLES + +% Edit the above text to modify the response to help naiveSettings + +% Last Modified by GUIDE v2.5 24-Apr-2013 13:22:43 + +% Begin initialization code - DO NOT EDIT +gui_Singleton = 1; +gui_State = struct('gui_Name', mfilename, ... + 'gui_Singleton', gui_Singleton, ... + 'gui_OpeningFcn', @naiveSettings_OpeningFcn, ... + 'gui_OutputFcn', @naiveSettings_OutputFcn, ... + 'gui_LayoutFcn', [] , ... + 'gui_Callback', []); +if nargin && ischar(varargin{1}) + gui_State.gui_Callback = str2func(varargin{1}); +end + +if nargout + [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); +else + gui_mainfcn(gui_State, varargin{:}); +end +% End initialization code - DO NOT EDIT + + +% --- Executes just before naiveSettings is made visible. +function naiveSettings_OpeningFcn(hObject, eventdata, handles, varargin) +% This function has no output args, see OutputFcn. +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +% varargin command line arguments to naiveSettings (see VARARGIN) + +% Choose default command line output for naiveSettings +handles.output = hObject; + +% Update handles structure +guidata(hObject, handles); + +% UIWAIT makes naiveSettings wait for user response (see UIRESUME) +% uiwait(handles.figure1); +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +naive_options=RaPIdObject.naiveSettings; +try + set(handles.edit1,'String',naive_options.tolerance1); + set(handles.edit2,'String',naive_options.tolerance2); + set(handles.edit3,'String',naive_options.iterations); + set(handles.edit4,'String',naive_options.iterations2); + set(handles.edit5,'String',naive_options.iterations3); +end + + + +% --- Outputs from this function are returned to the command line. +function varargout = naiveSettings_OutputFcn(hObject, eventdata, handles) +% varargout cell array for returning output args (see VARARGOUT); +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Get default command line output from handles structure +varargout{1} = handles.output; + + + +function edit1_Callback(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit1 as text +% str2double(get(hObject,'String')) returns contents of edit1 as a double + + +% --- Executes during object creation, after setting all properties. +function edit1_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit2_Callback(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit2 as text +% str2double(get(hObject,'String')) returns contents of edit2 as a double + + +% --- Executes during object creation, after setting all properties. +function edit2_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit3_Callback(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit3 as text +% str2double(get(hObject,'String')) returns contents of edit3 as a double + + +% --- Executes during object creation, after setting all properties. +function edit3_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit4_Callback(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit4 as text +% str2double(get(hObject,'String')) returns contents of edit4 as a double + + +% --- Executes during object creation, after setting all properties. +function edit4_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit5_Callback(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit5 as text +% str2double(get(hObject,'String')) returns contents of edit5 as a double + + +% --- Executes during object creation, after setting all properties. +function edit5_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in pushbutton6. +function pushbutton6_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton6 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +naive_options.tolerance1 = eval(get(handles.edit1,'String')); +naive_options.tolerance2 = eval(get(handles.edit2,'String')); +naive_options.iterations = eval(get(handles.edit3,'String')); +naive_options.iterations2 = eval(get(handles.edit4,'String')); +naive_options.iterations3 = eval(get(handles.edit5,'String')); +settings2.naive_options = naive_options; +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +RaPIdObject.naiveSettings = setstructfields(RaPIdObject.naiveSettings,settings2); +close(gcf) diff --git a/Sources/gui/otherSettings.fig b/Sources/gui/otherSettings.fig new file mode 100644 index 0000000..93f1408 Binary files /dev/null and b/Sources/gui/otherSettings.fig differ diff --git a/Sources/gui/otherSettings.m b/Sources/gui/otherSettings.m new file mode 100644 index 0000000..1994c6e --- /dev/null +++ b/Sources/gui/otherSettings.m @@ -0,0 +1,461 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + + +function varargout = otherSettings(varargin) +% OTHERSETTINGS MATLAB code for otherSettings.fig +% OTHERSETTINGS, by itself, creates a new OTHERSETTINGS or raises the existing +% singleton*. +% +% H = OTHERSETTINGS returns the handle to a new OTHERSETTINGS or the handle to +% the existing singleton*. +% +% OTHERSETTINGS('CALLBACK',hObject,eventData,handles,...) calls the local +% function named CALLBACK in OTHERSETTINGS.M with the given input arguments. +% +% OTHERSETTINGS('Property','Value',...) creates a new OTHERSETTINGS or raises the +% existing singleton*. Starting from the left, property value pairs are +% applied to the GUI before otherSettings_OpeningFcn gets called. An +% unrecognized property name or invalid value makes property application +% stop. All inputs are passed to otherSettings_OpeningFcn via varargin. +% +% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one +% instance to run (singleton)". +% +% See also: GUIDE, GUIDATA, GUIHANDLES + +% Edit the above text to modify the response to help otherSettings + +% Last Modified by GUIDE v2.5 24-May-2013 12:05:46 + +% Begin initialization code - DO NOT EDIT +gui_Singleton = 1; +gui_State = struct('gui_Name', mfilename, ... + 'gui_Singleton', gui_Singleton, ... + 'gui_OpeningFcn', @otherSettings_OpeningFcn, ... + 'gui_OutputFcn', @otherSettings_OutputFcn, ... + 'gui_LayoutFcn', [] , ... + 'gui_Callback', []); +if nargin && ischar(varargin{1}) + gui_State.gui_Callback = str2func(varargin{1}); +end + +if nargout + [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); +else + gui_mainfcn(gui_State, varargin{:}); +end +% End initialization code - DO NOT EDIT + + +% --- Executes just before otherSettings is made visible. +function otherSettings_OpeningFcn(hObject, eventdata, handles, varargin) +% This function has no output args, see OutputFcn. +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +% varargin command line arguments to otherSettings (see VARARGIN) + +% Choose default command line output for otherSettings +handles.output = hObject; + +% Update handles structure +guidata(hObject, handles); + +% UIWAIT makes otherSettings wait for user response (see UIRESUME) +% uiwait(handles.figure1); +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); + +try + set(handles.edit1,'String',RaPIdObject.gaExtSettings); + set(handles.edit2,'String',RaPIdObject.nmSettings); + set(handles.edit3,'String',RaPIdObject.cgSettings); + %set(handles.edit4,'String',RaPIdObject.psoExtPath); + set(handles.edit5,'String',RaPIdObject.psoExtSettings); + +end +if isprop(RaPIdObject,'knitroSettings') + set(handles.edit8,'String',RaPIdObject.knitroSettings.path2Knitro); + set(handles.edit9,'String',RaPIdObject.knitroSettings.knOptions); + set(handles.edit10,'String',RaPIdObject.knitroSettings.knOptionsFile); +end +if isprop(RaPIdObject,'fminconSettings') + set(handles.edit11,'String',RaPIdObject.fminconSettings); +end + + +% --- Outputs from this function are returned to the command line. +function varargout = otherSettings_OutputFcn(hObject, eventdata, handles) +% varargout cell array for returning output args (see VARARGOUT); +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Get default command line output from handles structure +varargout{1} = handles.output; + + +% --- Executes on button press in pushbutton2. +function pushbutton2_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +RaPIdObject.gaExtSettings = get(handles.edit1,'String'); +RaPIdObject.nmSettings = get(handles.edit2,'String'); +RaPIdObject.cgSettings = get(handles.edit3,'String'); +%settings2.psoExtPath = get(handles.edit4,'String'); +RaPIdObject.psoExtSettings = get(handles.edit5,'String'); +RaPIdObject.knitroSettings.path2Knitro = get(handles.edit8,'String'); +RaPIdObject.knitroSettings.knOptions = get(handles.edit9,'String'); +RaPIdObject.knitroSettings.knOptionsFile = get(handles.edit10,'String'); +firstMethod = get(handles.popupmenu1,'String'); +RaPIdObject.combiSettings.firstMethod = firstMethod{get(handles.popupmenu1,'value')}; +secondMethod = get(handles.popupmenu2,'String'); +RaPIdObject.combiSettings.secondMetod = secondMethod{get(handles.popupmenu2,'value')}; +close(gcf) + + + +function edit6_Callback(hObject, eventdata, handles) +% hObject handle to edit6 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit6 as text +% str2double(get(hObject,'String')) returns contents of edit6 as a double + + +% --- Executes during object creation, after setting all properties. +function edit6_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit6 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit7_Callback(hObject, eventdata, handles) +% hObject handle to edit7 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit7 as text +% str2double(get(hObject,'String')) returns contents of edit7 as a double + + +% --- Executes during object creation, after setting all properties. +function edit7_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit7 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit4_Callback(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit4 as text +% str2double(get(hObject,'String')) returns contents of edit4 as a double + + +% --- Executes during object creation, after setting all properties. +function edit4_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit5_Callback(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit5 as text +% str2double(get(hObject,'String')) returns contents of edit5 as a double + + +% --- Executes during object creation, after setting all properties. +function edit5_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in pushbutton1. +function pushbutton1_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +path = uigetdir(); +set(handles.edit4,'String',path) + +function edit1_Callback(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit1 as text +% str2double(get(hObject,'String')) returns contents of edit1 as a double + + +% --- Executes during object creation, after setting all properties. +function edit1_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit2_Callback(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit2 as text +% str2double(get(hObject,'String')) returns contents of edit2 as a double + + +% --- Executes during object creation, after setting all properties. +function edit2_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit3_Callback(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit3 as text +% str2double(get(hObject,'String')) returns contents of edit3 as a double + + +% --- Executes during object creation, after setting all properties. +function edit3_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on selection change in popupmenu1. +function popupmenu1_Callback(hObject, eventdata, handles) +% hObject handle to popupmenu1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: contents = cellstr(get(hObject,'String')) returns popupmenu1 contents as cell array +% contents{get(hObject,'Value')} returns selected item from popupmenu1 + + +% --- Executes during object creation, after setting all properties. +function popupmenu1_CreateFcn(hObject, eventdata, handles) +% hObject handle to popupmenu1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: popupmenu controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on selection change in popupmenu2. +function popupmenu2_Callback(hObject, eventdata, handles) +% hObject handle to popupmenu2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: contents = cellstr(get(hObject,'String')) returns popupmenu2 contents as cell array +% contents{get(hObject,'Value')} returns selected item from popupmenu2 + + +% --- Executes during object creation, after setting all properties. +function popupmenu2_CreateFcn(hObject, eventdata, handles) +% hObject handle to popupmenu2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: popupmenu controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit8_Callback(hObject, eventdata, handles) +% hObject handle to edit8 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit8 as text +% str2double(get(hObject,'String')) returns contents of edit8 as a double + + +% --- Executes during object creation, after setting all properties. +function edit8_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit8 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit9_Callback(hObject, eventdata, handles) +% hObject handle to edit9 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit9 as text +% str2double(get(hObject,'String')) returns contents of edit9 as a double + + +% --- Executes during object creation, after setting all properties. +function edit9_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit9 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in pushbutton3. +function pushbutton3_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +path = uigetdir(); +set(handles.edit8,'String',path) + + +% --- Executes on button press in pushbutton4. +function pushbutton4_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +file = uigetfile(); +set(handles.edit10,'String',file) + + +function edit10_Callback(hObject, eventdata, handles) +% hObject handle to edit10 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit10 as text +% str2double(get(hObject,'String')) returns contents of edit10 as a double + + +% --- Executes during object creation, after setting all properties. +function edit10_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit10 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit11_Callback(hObject, eventdata, handles) +% hObject handle to edit11 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit11 as text +% str2double(get(hObject,'String')) returns contents of edit11 as a double + + +% --- Executes during object creation, after setting all properties. +function edit11_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit11 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end diff --git a/Sources/gui/pathSettings.fig b/Sources/gui/pathSettings.fig new file mode 100644 index 0000000..4b453ee Binary files /dev/null and b/Sources/gui/pathSettings.fig differ diff --git a/Sources/gui/pathSettings.m b/Sources/gui/pathSettings.m new file mode 100644 index 0000000..57b3375 --- /dev/null +++ b/Sources/gui/pathSettings.m @@ -0,0 +1,300 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + + +function varargout = pathSettings(varargin) +% RAPID_GUI MATLAB code for rapid_gui.fig +% RAPID_GUI, by itself, creates a new RAPID_GUI or raises the existing +% singleton*. +% +% H = RAPID_GUI returns the handle to a new RAPID_GUI or the handle to +% the existing singleton*. +% +% RAPID_GUI('CALLBACK',hObject,eventData,handles,...) calls the local +% function named CALLBACK in RAPID_GUI.M with the given input arguments. +% +% RAPID_GUI('Property','Value',...) creates a new RAPID_GUI or raises the +% existing singleton*. Starting from the left, property value pairs are +% applied to the GUI before rapid_gui_OpeningFcn gets called. An +% unrecognized property name or invalid value makes property application +% stop. All inputs are passed to rapid_gui_OpeningFcn via varargin. +% +% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one +% instance to run (singleton)". +% +% See also: GUIDE, GUIDATA, GUIHANDLES + +% Edit the above text to modify the response to help rapid_gui + +% Last Modified by GUIDE v2.5 14-May-2013 18:08:58 + +% Begin initialization code - DO NOT EDIT +gui_Singleton = 1; +gui_State = struct('gui_Name', mfilename, ... + 'gui_Singleton', gui_Singleton, ... + 'gui_OpeningFcn', @rapid_gui_OpeningFcn, ... + 'gui_OutputFcn', @rapid_gui_OutputFcn, ... + 'gui_LayoutFcn', [] , ... + 'gui_Callback', []); +if nargin && ischar(varargin{1}) + gui_State.gui_Callback = str2func(varargin{1}); +end + +if nargout + [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); +else + gui_mainfcn(gui_State, varargin{:}); +end + +% End initialization code - DO NOT EDIT + + +% --- Executes just before rapid_gui is made visible. +function rapid_gui_OpeningFcn(hObject, eventdata, handles, varargin) +% This function has no output args, see OutputFcn. +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +% varargin command line arguments to rapid_gui (see VARARGIN) +% Choose default command line output for rapid_gui +handles.output = hObject; +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +guidata(hObject, handles);% Update handles structure +string = mfilename('fullpath'); +string = string(1:end-length(mfilename)-5); +path = strcat(string,'\model'); +set(handles.edit6,'String',path); +set(handles.edit1,'String','test.mdl'); +set(handles.edit2,'String','FMUme'); +set(handles.edit5,'String','path to your .fmu here'); +tmp=RaPIdObject.experimentSettings; +if isfield(tmp,'pathToSimulinkModel') + set(handles.edit6,'String',tmp.pathToSimulinkModel); +end +if isfield(tmp,'modelName') + set(handles.edit1,'String',tmp.modelName); +end +if isfield(tmp,'blockName') + set(handles.edit2,'String',tmp.blockName); +end +if isfield(tmp,'scopeName') + set(handles.edit4,'String',tmp.scopeName); +end +if isfield(tmp,'pathToFmuModel') + set(handles.edit5,'String',tmp.pathToFmuModel); +end + + + + +% --- Outputs from this function are returned to the command line. +function varargout = rapid_gui_OutputFcn(hObject, eventdata, handles) +% varargout cell array for returning output args (see VARARGOUT); +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Get default command line output from handles structure +varargout{1} = handles.output; + + +% --- Executes on button press in pushbutton3. +function pushbutton3_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +[FILENAME, PATHNAME] = uigetfile({'*.mdl;*.slx','Simulink-files'},'Select the Simulink file that contains the FMU block you want to simulate'); + + +try + load_system(strcat(PATHNAME,FILENAME)); + listOfFMUblocks=find_system(gcs,'regexp','on','Type','block','FunctionName','sfun_fmu_.'); + close_system(gcs); + if isempty(listOfFMUblocks) + disp('There seems to be no valid FMU-blocks in the Simulink model'); + elseif length(listOfFMUblocks)==1 + FMUblock=listOfFMUblocks{:}; + set(handles.edit2,'String',FMUblock); + end +catch err + disp(err.message); +end +set(handles.edit6,'String',strcat(PATHNAME,FILENAME)); +set(handles.edit1,'String',FILENAME); + + + + + + +function edit1_Callback(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit1 as text +% str2double(get(hObject,'String')) returns contents of edit1 as a double + + +% --- Executes during object creation, after setting all properties. +function edit1_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit2_Callback(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit2 as text +% str2double(get(hObject,'String')) returns contents of edit2 as a double + + +% --- Executes during object creation, after setting all properties. +function edit2_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in pushbutton5. +function pushbutton5_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +[FILENAME, PATHNAME] = uigetfile({'*.fmu','FMU-files'},'Select the FMU file that you want to simulate (NB only FMI 1.0 for ODE-solving!)'); +set(handles.edit5,'String',fullfile(PATHNAME,FILENAME)) + +% --- Executes on button press in pushbutton7. +function pushbutton7_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton7 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +[~,tmp,~]=fileparts(get(handles.edit1,'String')); +RaPIdObject.experimentSettings.modelName = tmp; +RaPIdObject.experimentSettings.blockName = get(handles.edit2,'String'); +RaPIdObject.experimentSettings.scopeName = get(handles.edit4,'String'); +RaPIdObject.experimentSettings.pathToFmuModel = get(handles.edit5,'String'); +RaPIdObject.experimentSettings.pathToSimulinkModel = get(handles.edit6,'String'); +close(gcf) + + + +function edit4_Callback(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit4 as text +% str2double(get(hObject,'String')) returns contents of edit4 as a double + + +% --- Executes during object creation, after setting all properties. +function edit4_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in pushbutton8. +function pushbutton8_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton8 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +% RaPIdObject.experimentSettings.modelName = get(handles.edit1,'String'); +% RaPIdObject.experimentSettings.blockName = get(handles.edit2,'String'); +% RaPIdObject.experimentSettings.scopeName = get(handles.edit4,'String'); +% RaPIdObject.experimentSettings.pathToFmuModel = get(handles.edit5,'String'); +% RaPIdObject.experimentSettings.pathToSimulinkModel = get(handles.edit6,'String'); +open_system(RaPIdObject.experimentSettings.pathToSimulinkModel) + + +function edit5_Callback(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit5 as text +% str2double(get(hObject,'String')) returns contents of edit5 as a double + + +% --- Executes during object creation, after setting all properties. +function edit5_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit6_Callback(hObject, eventdata, handles) +% hObject handle to edit6 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit6 as text +% str2double(get(hObject,'String')) returns contents of edit6 as a double + + +% --- Executes during object creation, after setting all properties. +function edit6_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit6 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end diff --git a/Sources/gui/psoSettings.fig b/Sources/gui/psoSettings.fig new file mode 100644 index 0000000..2bd85e5 Binary files /dev/null and b/Sources/gui/psoSettings.fig differ diff --git a/Sources/gui/psoSettings.m b/Sources/gui/psoSettings.m new file mode 100644 index 0000000..bfc0b08 --- /dev/null +++ b/Sources/gui/psoSettings.m @@ -0,0 +1,360 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + + +function varargout = psoSettings(varargin) +% PSOSETTINGS MATLAB code for psoSettings.fig +% PSOSETTINGS, by itself, creates a new PSOSETTINGS or raises the existing +% singleton*. +% +% H = PSOSETTINGS returns the handle to a new PSOSETTINGS or the handle to +% the existing singleton*. +% +% PSOSETTINGS('CALLBACK',hObject,eventData,handles,...) calls the local +% function named CALLBACK in PSOSETTINGS.M with the given input arguments. +% +% PSOSETTINGS('Property','Value',...) creates a new PSOSETTINGS or raises the +% existing singleton*. Starting from the left, property value pairs are +% applied to the GUI before psoSettings_OpeningFcn gets called. An +% unrecognized property name or invalid value makes property application +% stop. All inputs are passed to psoSettings_OpeningFcn via varargin. +% +% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one +% instance to run (singleton)". +% +% See also: GUIDE, GUIDATA, GUIHANDLES + +% Edit the above text to modify the response to help psoSettings + +% Last Modified by GUIDE v2.5 17-May-2013 09:43:08 + +% Begin initialization code - DO NOT EDIT +gui_Singleton = 1; +gui_State = struct('gui_Name', mfilename, ... + 'gui_Singleton', gui_Singleton, ... + 'gui_OpeningFcn', @psoSettings_OpeningFcn, ... + 'gui_OutputFcn', @psoSettings_OutputFcn, ... + 'gui_LayoutFcn', [] , ... + 'gui_Callback', []); +if nargin && ischar(varargin{1}) + gui_State.gui_Callback = str2func(varargin{1}); +end + +if nargout + [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); +else + gui_mainfcn(gui_State, varargin{:}); +end +% End initialization code - DO NOT EDIT + + +% --- Executes just before psoSettings is made visible. +function psoSettings_OpeningFcn(hObject, eventdata, handles, varargin) +% This function has no output args, see OutputFcn. +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +% varargin command line arguments to psoSettings (see VARARGIN) +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +% Choose default command line output for psoSettings +handles.output = hObject; + +% Update handles structure +guidata(hObject, handles); + +% UIWAIT makes psoSettings wait for user response (see UIRESUME) +% uiwait(handles.figure1); + +if isprop(RaPIdObject,'psoSettings') + tmp=RaPIdObject.psoSettings; + set(handles.edit1,'String',tmp.alpha1); + set(handles.edit2,'String',tmp.alpha2); + set(handles.edit3,'String',tmp.alpha3); + set(handles.edit4,'String',tmp.limit); + set(handles.edit5,'String',tmp.nb_particles); + set(handles.edit6,'String',tmp.fitnessStopRatio); + set(handles.edit7,'String',tmp.kick_multiplier); + set(handles.edit14,'String',tmp.nRandMin); +end + + + +% --- Outputs from this function are returned to the command line. +function varargout = psoSettings_OutputFcn(hObject, eventdata, handles) +% varargout cell array for returning output args (see VARARGOUT); +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Get default command line output from handles structure +varargout{1} = handles.output; + + + +function edit1_Callback(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit1 as text +% str2double(get(hObject,'String')) returns contents of edit1 as a double + + +% --- Executes during object creation, after setting all properties. +function edit1_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit2_Callback(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit2 as text +% str2double(get(hObject,'String')) returns contents of edit2 as a double + + +% --- Executes during object creation, after setting all properties. +function edit2_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit2 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit3_Callback(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit3 as text +% str2double(get(hObject,'String')) returns contents of edit3 as a double + + +% --- Executes during object creation, after setting all properties. +function edit3_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit3 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit4_Callback(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit4 as text +% str2double(get(hObject,'String')) returns contents of edit4 as a double + + +% --- Executes during object creation, after setting all properties. +function edit4_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit4 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit5_Callback(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit5 as text +% str2double(get(hObject,'String')) returns contents of edit5 as a double + + +% --- Executes during object creation, after setting all properties. +function edit5_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit5 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit6_Callback(hObject, eventdata, handles) +% hObject handle to edit6 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit6 as text +% str2double(get(hObject,'String')) returns contents of edit6 as a double + + +% --- Executes during object creation, after setting all properties. +function edit6_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit6 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit7_Callback(hObject, eventdata, handles) +% hObject handle to edit7 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit7 as text +% str2double(get(hObject,'String')) returns contents of edit7 as a double + + +% --- Executes during object creation, after setting all properties. +function edit7_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit7 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in pushbutton1. +function pushbutton1_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +pso_options.alpha1 = eval(get(handles.edit1,'String')); +pso_options.alpha2 = eval(get(handles.edit2,'String')); +pso_options.alpha3 = eval(get(handles.edit3,'String')); +pso_options.limit = eval(get(handles.edit4,'String')); +pso_options.nRandMin = eval(get(handles.edit14,'String')); +pso_options.nb_particles = eval(get(handles.edit5,'String')); +pso_options.fitnessStopRatio = eval(get(handles.edit6,'String')); +pso_options.kick_multiplier = eval(get(handles.edit7,'String')); +RaPIdObject.psoSettings = pso_options; +close(gcf) + + + +function edit14_Callback(hObject, eventdata, handles) +% hObject handle to edit14 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit14 as text +% str2double(get(hObject,'String')) returns contents of edit14 as a double + + +% --- Executes during object creation, after setting all properties. +function edit14_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit14 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit15_Callback(hObject, eventdata, handles) +% hObject handle to edit15 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit15 as text +% str2double(get(hObject,'String')) returns contents of edit15 as a double + + +% --- Executes during object creation, after setting all properties. +function edit15_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit15 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function edit16_Callback(hObject, eventdata, handles) +% hObject handle to edit16 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit16 as text +% str2double(get(hObject,'String')) returns contents of edit16 as a double + + +% --- Executes during object creation, after setting all properties. +function edit16_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit16 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end diff --git a/Sources/gui/rapid_main_window.fig b/Sources/gui/rapid_main_window.fig new file mode 100644 index 0000000..6931d16 Binary files /dev/null and b/Sources/gui/rapid_main_window.fig differ diff --git a/Sources/gui/rapid_main_window.m b/Sources/gui/rapid_main_window.m new file mode 100644 index 0000000..dce5dca --- /dev/null +++ b/Sources/gui/rapid_main_window.m @@ -0,0 +1,622 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + + +function varargout = rapid_main_window(varargin) +% RAPID_MAIN_WINDOW MATLAB code for rapid_main_window.fig +% rapid_main_window, by itself, creates a new rapid_main_window or raises the existing +% singleton*. +% +% H = rapid_main_window returns the handle to a new rapid_main_window or the handle to +% the existing singleton*. +% +% rapid_main_window('CALLBACK',hObject,eventData,handles,...) calls the local +% function named CALLBACK in MAIN.M with the given input arguments. +% +% rapid_main_window('Property','Value',...) creates a new MAIN or raises the +% existing singleton*. Starting from the left, property value pairs are +% applied to the GUI before main_OpeningFcn gets called. An +% unrecognized property name or invalid value makes property application +% stop. All inputs are passed to main_OpeningFcn via varargin. +% +% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one +% instance to run (singleton)". +% +% See also: GUIDE, GUIDATA, GUIHANDLES + +% Edit the above text to modify the response to help main + +% Last Modified by GUIDE v2.5 08-Sep-2015 19:46:45 + +% Begin initialization code - DO NOT EDIT +gui_Singleton = 1; +gui_State = struct('gui_Name', mfilename, ... + 'gui_Singleton', gui_Singleton, ... + 'gui_OpeningFcn', @rapid_main_window_OpeningFcn, ... + 'gui_OutputFcn', @rapid_main_window_OutputFcn, ... + 'gui_LayoutFcn', [] , ... + 'gui_Callback', []); +if nargin && ischar(varargin{1}) + gui_State.gui_Callback = str2func(varargin{1}); +end + +if nargout + [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); +else + gui_mainfcn(gui_State, varargin{:}); +end +% End initialization code - DO NOT EDIT + + +% --- Executes just before main is made visible. +function rapid_main_window_OpeningFcn(hObject, eventdata, handles, varargin) + +% This function has no output args, see OutputFcn. +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +% varargin command line arguments to main (see VARARGIN) + +% Choose default command line output for main +handles.output = hObject; +% Update handles structure +guidata(hObject, handles); +setappdata(0,'HandleMainGUI',hObject); +try + path2rapid=getPathToRapid(); + load(fullfile(path2rapid,'core\data.mat'),'RaPIdObject');%load standard settings... + setappdata(handles.MainRaPiDWindow,'RaPIdObject',RaPIdObject); +catch err + disp err; + rethrow(err); +end +% if isfield(mySettings,'dataT') +% set(handles.MeasuredOutputPath_EditableTextfield,'String',mySettings.path2data); +% set(handles.OutputTimeVectorExpression_EditableTextfield,'String',mySettings.dataT); +% set(handles.OutputArrayExpression_EditableTextfield,'String',mySettings.dataY); +% +% if isfield(mySettings,'inDat') +% set(handles.InputArrayExpression_EditableTextfield,'String',mySettings.inDat.path); +% set(handles.InputTimeVectorExpression_EditableTextfield,'String',mySettings.inDat.time); +% set(handles.InputArrayExpression_EditableTextfield,'String',mySettings.inDat.signal); +% end +% end + + +% UIWAIT makes main wait for user response (see UIRESUME) +% uiwait(handles.MainRaPiDWindow); + + +% --- Outputs from this function are returned to the command line. +function varargout = rapid_main_window_OutputFcn(hObject, eventdata, handles) +% varargout cell array for returning output args (see VARARGOUT); +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Get default command line output from handles structure +varargout{1} = handles.output; + + +% --- Executes on selection change in OptimMethodSelect_popupmenu. +function OptimMethodSelect_popupmenu_Callback(hObject, eventdata, handles) +% hObject handle to OptimMethodSelect_popupmenu (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: contents = cellstr(get(hObject,'String')) returns OptimMethodSelect_popupmenu contents as cell array +% contents{get(hObject,'Value')} returns selected item from OptimMethodSelect_popupmenu +str = get(handles.OptimMethodSelect_popupmenu,'String'); +RaPIdObject=getappdata(handles.MainRaPiDWindow,'RaPIdObject'); +RaPIdObject.experimentSettings.optimizationAlgorithm = str{get(handles.OptimMethodSelect_popupmenu,'Value')}; + + +% --- Executes during object creation, after setting all properties. +function OptimMethodSelect_popupmenu_CreateFcn(hObject, eventdata, handles) +% hObject handle to OptimMethodSelect_popupmenu (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: popupmenu controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in OpenSimulink_pushbutton. +function OpenSimulink_pushbutton_Callback(hObject, eventdata, handles) + +% hObject handle to OpenSimulink_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +RaPIdObject=getappdata(handles.MainRaPiDWindow,'RaPIdObject'); +set(handles.text8,'String','Running and Visualizing Optimization.'); +%set(handles.text8,'BackgroundColor','r'); +RaPIdObject.experimentSettings.solverMode='Simulink'; +RaPIdObject.experimentSettings.displayMode='Show'; +% THIS STUFF MIGHT GO +try + if exist(RaPIdObject.experimentSettings.pathToSimulinkModel,'file') + tmp=RaPIdObject.experimentSettings.pathToSimulinkModel; + elseif ~exist(RaPIdObject.experimentSettings.pathToSimulinkModel,'file') && exist(fullfile(evalin('base','pwd'),RaPIdObject.experimentSettings.pathToSimulinkModel),'file') + tmp=fullfile(evalin('base','pwd'),RaPIdObject.experimentSettings.pathToSimulinkModel); + end + open_system(tmp); + + % mySettings.realData = transpose(eval(mySettings.dataY)); + % mySettings.realTime = eval(mySettings.dataT); +catch err + disp err +end + + +% --- Executes on button press in RunOptimization_pushbutton. +function RunOptimization_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to RunOptimization_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +RaPIdObject=getappdata(handles.MainRaPiDWindow,'RaPIdObject'); +% mySettings.mode='Simulink'; +% [mySettings.realTime, i_t]=unique(mySettings.realTime); % check that we only use unique time stamps +% mySettings.realData=mySettings.realData(i_t,:); + +try + tic + [sol, hist] = rapid(RaPIdObject); + assignin('base','sol',sol); + assignin('base','hist',hist); + toc +catch err + set(handles.text8,'BackgroundColor','y'); + set(handles.text8,'String','error'); + rethrow(err); +end +set(handles.text8,'String','Simulation completed.'); +set(handles.text8,'BackgroundColor','g'); + + +% --- Executes on button press in OpenPlot_pushbutton. +function OpenPlot_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to OpenPlot_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +RaPIdObject=getappdata(handles.MainRaPiDWindow,'RaPIdObject'); + +if exist('sol','var') + figure + part.p = sol(1,:); + [res] = rapid_simuSystem( part,RaPIdObject); + identifiedSysData = mySettings.lastSimu.res; + idTime = mySettings.lastSimu.time; + resInterpo = rapid_interpolate(mySettings.realTime,idTime,identifiedSysData); + for i = 1:length(mySettings.fmuOutData); + subplot(100*ceil(length(mySettings.fmuOutData)/2)+20+i) + plot(mySettings.realTime,mySettings.realData(i,:)) + hold on + plot(idTime,identifiedSysData(i,:),'--r') + + plot(mySettings.realTime,resInterpo(i,:),'--g') + + title(mySettings.fmuOutData{i}) + legend('real sys', 'identified sys', 'interpolated data') + end +else + warning('No Data to plot...') +end + + +% --- Executes on button press in GAAlgoSettings_pushbutton. +function GAAlgoSettings_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to GAAlgoSettings_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +gaSettings + +% --- Executes on button press in GeneralSettings_pushbutton. +function GeneralSettings_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to GeneralSettings_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +generalSettings + +% --- Executes on button press in PSOAlgoSettings_pushbutton. +function PSOAlgoSettings_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to PSOAlgoSettings_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +psoSettings + +% --- Executes on button press in NaiveAlgoSettings_pushbutton. +function NaiveAlgoSettings_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to NaiveAlgoSettings_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +naiveSettings + +% --- Executes on button press in MiscOptions_pushbutton. +function MiscOptions_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to MiscOptions_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +otherSettings + +% --- Executes on button press in pushbutton9. +function pushbutton9_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton9 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + + +% --- Executes on button press in pushbutton10. +function pushbutton10_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton10 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + + +% --- Executes on button press in pushbutton11. +function pushbutton11_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton11 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + + +% --- Executes on button press in pushbutton12. +function pushbutton12_Callback(hObject, eventdata, handles) +% hObject handle to pushbutton12 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + + +% --- Executes on button press in OpenSimulink_pushbutton. +function pushbutton15_Callback(hObject, eventdata, handles) +% hObject handle to OpenSimulink_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +RaPIdObject=getappdata(handles.MainRaPiDWindow,'RaPIdObject'); +if exist(RaPIdObject.experimentSettings.pathToSimulinkModel,'file') + open_system(RaPIdObject.experimentSettings.pathToSimulinkModel) +elseif ~exist(RaPIdObject.experimentSettings.pathToSimulinkModel,'file') && exist(fullfile(evalin('base','pwd'),RaPIdObject.experimentSettings.pathToSimulinkModel),'file') + open_system(fullfile(evalin('base','pwd'),RaPIdObject.experimentSettings.pathToSimulinkModel)) +end + + + +function OutputTimeVectorExpression_EditableTextfield_Callback(hObject, eventdata, handles) +% hObject handle to OutputTimeVectorExpression_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of OutputTimeVectorExpression_EditableTextfield as text +% str2double(get(hObject,'String')) returns contents of OutputTimeVectorExpression_EditableTextfield as a double + + +% --- Executes during object creation, after setting all properties. +function OutputTimeVectorExpression_EditableTextfield_CreateFcn(hObject, eventdata, handles) +% hObject handle to OutputTimeVectorExpression_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + +function OutputArrayExpression_EditableTextfield_Callback(hObject, eventdata, handles) +% hObject handle to OutputArrayExpression_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of OutputArrayExpression_EditableTextfield as text +% str2double(get(hObject,'String')) returns contents of OutputArrayExpression_EditableTextfield as a double + + +% --- Executes during object creation, after setting all properties. +function OutputArrayExpression_EditableTextfield_CreateFcn(hObject, eventdata, handles) +% hObject handle to OutputArrayExpression_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in MeasuredOutputSelection_pushbutton. +function MeasuredOutputSelection_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to MeasuredOutputSelection_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +[filename, pathname] = uigetfile(); +set(handles.MeasuredOutputPath_EditableTextfield,'String',strcat(pathname,filename)); + + +% --- Executes on button press in SendSettings_pushbutton. +function SendSettings_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to SendSettings_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +RaPIdObject=getappdata(handles.MainRaPiDWindow,'RaPIdObject'); +RaPIdObject.experimentData.expressionReferenceTime = get(handles.OutputTimeVectorExpression_EditableTextfield,'String'); +RaPIdObject.experimentData.expressionReferenceData = get(handles.OutputArrayExpression_EditableTextfield,'String'); +RaPIdObject.experimentData.pathToReferenceData = get(handles.MeasuredOutputPath_EditableTextfield,'String'); +RaPIdObject.experimentData.expressionInDataTime = get(handles.InputTimeVectorExpression_EditableTextfield,'String'); +RaPIdObject.experimentData.expressionInData = get(handles.InputArrayExpression_EditableTextfield,'String'); +RaPIdObject.experimentData.pathToInData = get(handles.PathToInputData_EditableTextfield,'String'); + +% --- Executes on button press in SaveContainer_pushbutton. +function SaveContainer_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to SaveContainer_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +RaPIdObject=getappdata(handles.MainRaPiDWindow,'RaPIdObject'); +[filename, pathname] = uiputfile('*.mat'); +if exist('sol','var') + save(strcat(pathname,filename),'RaPIdObject','sol','hist'); +else + save(strcat(pathname,filename),'RaPIdObject') +end + + +% --- Executes on button press in LoadContainer_pushbutton. +function LoadContainer_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to LoadContainer_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +%RaPIdObject=getappdata(handles.MainRaPiDWindow,'RaPIdObject'); +[filename, pathname] = uigetfile; +load(strcat(pathname,filename)); +oldFolder = cd(pathname); +contentOfContainer=who('-file',strcat(pathname,filename)); +if any(strcmp(contentOfContainer,'mySettings')) + try + RaPIdObject=RaPIdClass(mySettings); + disp('Converted old container to new, please save this new container'); + catch err + disp(err.message) + end +end +if exist('RaPIdObject','var') && isa(RaPIdObject,'RaPIdClass') + setappdata(handles.MainRaPiDWindow,'RaPIdObject',RaPIdObject); + tmp=find(strcmp(cellstr(get(handles.OptimMethodSelect_popupmenu,'String')),RaPIdObject.experimentSettings.optimizationAlgorithm)); + set(handles.OptimMethodSelect_popupmenu,'Value',tmp); + + if strcmp(RaPIdObject.experimentSettings.solverMode,'Simulink') + tmp1=1; + tmp2=0; + else + tmp1=0; + tmp2=1; + end + set(handles.simulinkselector,'Value',tmp1); + set(handles.odeselector,'Value',tmp2); + if isprop(RaPIdObject,'experimentData') && isfield(RaPIdObject.experimentData, 'pathToReferenceData') + set(handles.MeasuredOutputPath_EditableTextfield,'String',RaPIdObject.experimentData.pathToReferenceData); + set(handles.OutputTimeVectorExpression_EditableTextfield,'String',RaPIdObject.experimentData.expressionReferenceTime); + set(handles.OutputArrayExpression_EditableTextfield,'String',RaPIdObject.experimentData.expressionReferenceData); + if isfield(RaPIdObject.experimentData,'pathToInData') + set(handles.PathToInputData_EditableTextfield,'String',RaPIdObject.experimentData.pathToInData); + set(handles.InputTimeVectorExpression_EditableTextfield,'String',RaPIdObject.experimentData.expressionInDataTime); + set(handles.InputArrayExpression_EditableTextfield,'String',RaPIdObject.experimentData.expressionInData); + end + end +else + warning('Something went wrong, check the format of the container!') +end + + +% --- Executes on button press in LastResult_pushbutton. +function LastResult_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to LastResult_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +if exist('sol','var') %To be fixed + results; +else + warning('No data to look at...') +end + + +% --- Executes on button press in PathSettings_pushbutton. +function PathSettings_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to PathSettings_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +pathSettings + +function MeasuredOutputPath_EditableTextfield_Callback(hObject, eventdata, handles) +% hObject handle to MeasuredOutputPath_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of MeasuredOutputPath_EditableTextfield as text +% str2double(get(hObject,'String')) returns contents of MeasuredOutputPath_EditableTextfield as a double + + +% --- Executes during object creation, after setting all properties. +function MeasuredOutputPath_EditableTextfield_CreateFcn(hObject, eventdata, handles) +% hObject handle to MeasuredOutputPath_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes on button press in MeasuredInputSelection_pushbutton. +function MeasuredInputSelection_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to MeasuredInputSelection_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +[filename, pathname] = uigetfile(); +set(handles.PathToInputData_EditableTextfield,'String',strcat(pathname,filename)); + + +function InputArrayExpression_EditableTextfield_Callback(hObject, eventdata, handles) +% hObject handle to InputArrayExpression_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of InputArrayExpression_EditableTextfield as text +% str2double(get(hObject,'String')) returns contents of InputArrayExpression_EditableTextfield as a double + + +% --- Executes during object creation, after setting all properties. +function InputArrayExpression_EditableTextfield_CreateFcn(hObject, eventdata, handles) +% hObject handle to InputArrayExpression_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + + +function InputTimeVectorExpression_EditableTextfield_Callback(hObject, eventdata, handles) +% hObject handle to InputTimeVectorExpression_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of InputTimeVectorExpression_EditableTextfield as text +% str2double(get(hObject,'String')) returns contents of InputTimeVectorExpression_EditableTextfield as a double + + +% --- Executes during object creation, after setting all properties. +function InputTimeVectorExpression_EditableTextfield_CreateFcn(hObject, eventdata, handles) +% hObject handle to InputTimeVectorExpression_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +function InputDataArrayexpression_EditableTextfield_Callback(hObject, eventdata, handles) +% hObject handle to InputArrayExpression_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of InputArrayExpression_EditableTextfield as text +% str2double(get(hObject,'String')) returns contents of InputArrayExpression_EditableTextfield as a double + + +% --- Executes during object creation, after setting all properties. +function InputDataArrayexpression_EditableTextfield_CreateFcn(hObject, eventdata, handles) +% hObject handle to InputArrayExpression_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes during object creation, after setting all properties. +function MainRaPiDWindow_CreateFcn(hObject, eventdata, handles) +% hObject handle to MainRaPiDWindow (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + + +% --- Executes on button press in FMUGenerationOptions_pushbutton. +function FMUGenerationOptions_pushbutton_Callback(hObject, eventdata, handles) +% hObject handle to FMUGenerationOptions_pushbutton (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +generateFmu; + + +function PathToInputData_EditableTextfield_Callback(hObject, eventdata, handles) +% hObject handle to PathToInputData_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of PathToInputData_EditableTextfield as text +% str2double(get(hObject,'String')) returns contents of PathToInputData_EditableTextfield as a double + + +% --- Executes during object creation, after setting all properties. +function PathToInputData_EditableTextfield_CreateFcn(hObject, eventdata, handles) +% hObject handle to PathToInputData_EditableTextfield (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end + + +% --- Executes during object creation, after setting all properties. +function text8_CreateFcn(hObject, eventdata, handles) +% hObject handle to text8 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + + +% --- Executes during object creation, after setting all properties. +function Logo_CreateFcn(hObject, eventdata, handles) +% hObject handle to axis1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called +axes(hObject) +imshow(fullfile(getPathToRapid,'gui','logoz.png')) +% Hint: place code in OpeningFcn to populate axis1 + + +% --- Executes during object creation, after setting all properties. +function SolverSelector_CreateFcn(hObject, eventdata, handles) +% hObject handle to SolverSelector (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called +set(hObject,'SelectionChangeFcn',@selcbk); +set(hObject,'SelectedObject',[]); % No selection +set(hObject,'Visible','on'); + + +% --- Handle toggling between different solver method +function selcbk(source,eventdata) +handle2main=getappdata(0,'HandleMainGUI'); +RaPIdObject=getappdata(handle2main,'RaPIdObject'); +if strcmp(get(get(source,'SelectedObject'),'String'),'Simulink') + RaPIdObject.experimentSettings.solverMode='Simulink'; +else + RaPIdObject.experimentSettings.solverMode='ODE'; +end diff --git a/Sources/gui/results.fig b/Sources/gui/results.fig new file mode 100644 index 0000000..8ea3206 Binary files /dev/null and b/Sources/gui/results.fig differ diff --git a/Sources/gui/results.m b/Sources/gui/results.m new file mode 100644 index 0000000..37600f9 --- /dev/null +++ b/Sources/gui/results.m @@ -0,0 +1,126 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + + +function varargout = results(varargin) +% RESULTS MATLAB code for results.fig +% RESULTS, by itself, creates a new RESULTS or raises the existing +% singleton*. +% +% H = RESULTS returns the handle to a new RESULTS or the handle to +% the existing singleton*. +% +% RESULTS('CALLBACK',hObject,eventData,handles,...) calls the local +% function named CALLBACK in RESULTS.M with the given input arguments. +% +% RESULTS('Property','Value',...) creates a new RESULTS or raises the +% existing singleton*. Starting from the left, property value pairs are +% applied to the GUI before results_OpeningFcn gets called. An +% unrecognized property name or invalid value makes property application +% stop. All inputs are passed to results_OpeningFcn via varargin. +% +% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one +% instance to run (singleton)". +% +% See also: GUIDE, GUIDATA, GUIHANDLES + +% Edit the above text to modify the response to help results + +% Last Modified by GUIDE v2.5 02-May-2013 15:47:20 + +% Begin initialization code - DO NOT EDIT +gui_Singleton = 1; +gui_State = struct('gui_Name', mfilename, ... + 'gui_Singleton', gui_Singleton, ... + 'gui_OpeningFcn', @results_OpeningFcn, ... + 'gui_OutputFcn', @results_OutputFcn, ... + 'gui_LayoutFcn', [] , ... + 'gui_Callback', []); +if nargin && ischar(varargin{1}) + gui_State.gui_Callback = str2func(varargin{1}); +end + +if nargout + [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); +else + gui_mainfcn(gui_State, varargin{:}); +end +% End initialization code - DO NOT EDIT + + +% --- Executes just before results is made visible. +function results_OpeningFcn(hObject, eventdata, handles, varargin) +% This function has no output args, see OutputFcn. +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) +% varargin command line arguments to results (see VARARGIN) + +% Choose default command line output for results +handles.output = hObject; + +% Update handles structure +guidata(hObject, handles); +load('core\data.mat'); +str = []; +for i = sol + str = strcat(str,', ',num2str(i)); +end +set(handles.edit1,'String',str(2:end)) +set(handles.text6,'String',mySettings.methodName) +% UIWAIT makes results wait for user response (see UIRESUME) +% uiwait(handles.figure1); + + +% --- Outputs from this function are returned to the command line. +function varargout = results_OutputFcn(hObject, eventdata, handles) +% varargout cell array for returning output args (see VARARGOUT); +% hObject handle to figure +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Get default command line output from handles structure +varargout{1} = handles.output; + + + +function edit1_Callback(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles structure with handles and user data (see GUIDATA) + +% Hints: get(hObject,'String') returns contents of edit1 as text +% str2double(get(hObject,'String')) returns contents of edit1 as a double + + +% --- Executes during object creation, after setting all properties. +function edit1_CreateFcn(hObject, eventdata, handles) +% hObject handle to edit1 (see GCBO) +% eventdata reserved - to be defined in a future version of MATLAB +% handles empty - handles not created until after all CreateFcns called + +% Hint: edit controls usually have a white background on Windows. +% See ISPC and COMPUTER. +if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor')) + set(hObject,'BackgroundColor','white'); +end diff --git a/Sources/matlab.mat b/Sources/matlab.mat new file mode 100644 index 0000000..ee16fcb Binary files /dev/null and b/Sources/matlab.mat differ diff --git a/Sources/run_rapid_cmd.m b/Sources/run_rapid_cmd.m new file mode 100644 index 0000000..2edfca9 --- /dev/null +++ b/Sources/run_rapid_cmd.m @@ -0,0 +1,134 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +%% Main script for running RaPiD without a GUI +% To prepare the parameter estimation of your own model, copy first the +% simulink model contained in myTest (resp. myTestIO), load the appropriate +% *.fmu file and adapt the model where required (number of output/number +% of input) +% To use the toolbox in command line, change the parameters given in this +% script and run it. +% Change first the parameters relative to your system itself in the first +% then change the parameters of the different identification methods +% The usage and functionality of every parameter is disscussed in the user +% manual. + +%% Print out the copyright statement on launch +type('copyright_statement.txt') +%% Global Settings (independant of the method chosen) +containerFile='C:\Users\janlav\Documents\rapid_release\source\RaPId\examples\myTestIO64bit\variableIO64PSOtestContainer.mat'; +contentOfContainer=who('-file',containerFile); +load(containerFile); +oldFolder = cd(fileparts(containerFile)); +if any(strcmp(contentOfContainer,'mySettings')) + try + RaPIdObject=RaPIdClass(mySettings); + disp('Converted old container to new, please save this new container'); + catch err + disp(err.message) + end +end + +% We can either use Simulink or Matlab's ODE solver directly. +switch RaPIdObject.experimentSettings.solverMode + case 'ODE' + + case 'Simulink' + +end +RaPIdObject.experimentSettings.solverMode='ODE'; +%% This part contains example of settings that can changed at will if needed +ChangeLoadedSettings=0; +if ChangeLoadedSettings + switch RaPIdObject.experimentSettings.optimizationAlgorithm + case 'pso' + pso_options.alpha1 = 0.5/(0.5+1+0.8); + pso_options.alpha2 = 1/(0.5+1+0.8); + pso_options.alpha3 = 0.8/(0.5+1+0.8); + pso_options.fitnessStopRatio = 1e-5; + pso_options.kick_multiplier = 2e-3; + pso_options.nb_particles = 5; + pso_options.limit = psoSettings.nbMaxIterations/pso_options.nb_particles; + pso_options.nRandMin = 2; + pso_options.p0s = psoSettings.p0; + pso_options.storeData = 0; + RaPIdObject.psoSettings = pso_options; + case 'ga' + ga_options.nbCromosomes = 40; + ga_options.nRandMin = 3; + ga_options.p0s = []; + ga_options.nbCroossOver1 = 10; + ga_options.nbCroossOver2 = 10; + ga_options.nbMutations = 30; + ga_options.nbReproduction = ceil(ga_options.nbCromosomes/4); + ga_options.limit = 10; + ga_options.fitnessStopRatio = 1e-5; + ga_options.headSize1 = ceil(ga_options.nbCroossOver1/2); + ga_options.headSize2 = ceil(ga_options.nbCroossOver1/2); + ga_options.headSize3 = ceil(ga_options.nbMutations/3); + ga_options.nbReinjection = 5; + ga_options.storeData = 0; + RaPIdObject.gaSettings = ga_options; + case 'naive' + naive_options.tolerance1 = 1e-4; + naive_options.tolerance2 = 1e-7; + naive_options.iterations = 2; + naive_options.iterations2 = 2; + naive_options.iterations3 = 2; + + RaPIdObject.naiveSettings = naive_options; + case 'fmincon' + RaPIdObject.fminconSettings = 'optimset(''FinDiffRelStep'',0.1)'; + case 'cg' + RaPIdObject.cgSettings = 'optimset(optimset(''fminunc''),''FinDiffType'',''central'',''TolX'',1e-6,''LargeScale'',''off'')'; + case 'nm' + RaPIdObject.nmSettings = 'optimset(''fminsearch'')'; + case 'pf' + pf_options.nb_particles = 10; + pf_options.nb_iterations = 2; + pf_options.prune_threshold = 0.2; + pf_options.kernel_sigma = 0.5; + pf_options.storeData = 0; + RaPIdObject.pfSettings = pf_options; + case 'combi' + RaPIdObject.combiSettings.firstMethod = 'pf'; + RaPIdObject.combiSettings.secondMethod = 'naive'; + case 'psoExt' + addpath(genpath(strcat(getPathToRapid,'\psopt'))); % change this path if needed + RaPIdObject.psoExtSettings = 'optimset(psooptimset,''TolFun'',1e-2)'; + case 'gaExt' + RaPIdObject.gaExtSettings = 'gaoptimset'; + case 'knitro' + RaPIdObject.knitroSettings.path2Knitro = 'P:\Program Files\Ziena\knitro'; + RaPIdObject.experimentSettings.p_0 = [0.35 0.4]; + RaPIdObject.knitroSettings.knOptions = 'optimset(''Algorithm'',''interior-point'')'; + RaPIdObject.knitroSettings.knOptionsFile = []; + end +end +% run the computation +tic +[sol, hist] = rapid(RaPIdObject); +toc +sprintf('vector of parameter found:') +sol +hist \ No newline at end of file diff --git a/Sources/run_rapid_gui.m b/Sources/run_rapid_gui.m new file mode 100644 index 0000000..06a6028 --- /dev/null +++ b/Sources/run_rapid_gui.m @@ -0,0 +1,32 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +%% Print out the copyright statement on launch +type('copyright_statement.txt') + +%% Main script for GUI assisted use of the toolbox +% Run +% the GUI needs to be completely initialised the first time +% it is recommended to save containers when exiting the program or +% switching from a model to another. +rapid_main_window \ No newline at end of file diff --git a/Sources/setup_rapid.m b/Sources/setup_rapid.m new file mode 100644 index 0000000..d8258c7 --- /dev/null +++ b/Sources/setup_rapid.m @@ -0,0 +1,35 @@ +%% +% +% Copyright 2015 Luigi Vanfretti, Achour Amazouz, Maxime Baudette, +% Tetiana Bogodorova, Jan Lavenius, Tin Rabuzin, Giuseppe Laera, +% Francisco Gomez-Lopez +% +% The authors can be contacted by email: luigiv at kth dot se +% +% This file is part of Rapid Parameter Identification ("RaPId") . +% +% RaPId is free software: you can redistribute it and/or modify +% it under the terms of the GNU Lesser General Public License as published by +% the Free Software Foundation, either version 3 of the License, or +% (at your option) any later version. +% +% RaPId is distributed in the hope that it will be useful, +% but WITHOUT ANY WARRANTY; without even the implied warranty of +% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +% GNU Lesser General Public License for more details. +% +% You should have received a copy of the GNU Lesser General Public License +% along with RaPId. If not, see . + +%% Script For Initializing the Toolbox for the first time on a Computer +% Make sure this file is in the RaPId Toolbox folder +% +addpath(fullfile(fileparts(mfilename('fullpath')))); +addpath(fullfile(fileparts(mfilename('fullpath')), 'gui')); +addpath(genpath(fullfile(fileparts(mfilename('fullpath')), 'core'))); +savepath +if isempty(ver('FMItoolbox')) + warning('FMI toolbox does not seem to be installed! Keep this in mind if you receive error-messages while using RaPId.') +end + +run_rapid_gui \ No newline at end of file