This is the command line interface of iPhylo, a stand-alone tool for phylogenetic tree and chemical tree construction.
Please use the Python 3 environment. The develope and test environment is Python 3.8.
Please keep your network available for the first load, as well as enough space on your disk (about 2G), as the initial run needs to fetch the online database resources.
git clone https://github.com/ARise-fox/iPhylo-CLI.git to clone this project to your local directory.
Use pip install -r requirements.txt to preload the required packages.
Use the following commands with -h to see for the details of how it accepts parameters.
python iphylo.py phylotree
python iphylo.py chemtree
python iphylo.py chemonline
python iphylo.py csv2tree
python iphylo.py NPtree
python iphylo.py NPonline
This project is licensed under the GPL License - see the LICENSE file for details.