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Adaptive haplotype assembly for efficiently leveraging high coverage in long reads
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README.md

HapCHAT

Adaptive haplotype assembly for efficiently leveraging high coverage in long reads

Citation

If you use HapCHAT, please cite:

Stefano Beretta*, Murray Patterson*, Simone Zaccaria, Gianluca Della Vedova and Paola Bonizzoni. HapCHAT: adaptive haplotype assembly for efficiently leveraging high coverage in long reads. BMC Bioinformatics, 19(1):252 (2018). *Joint first authors

DOI: 10.1186/s12859-018-2253-8

Website

Instructions on how to install and use HapCHAT are on the website http://hapchat.algolab.eu

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