C++ implementation of vcfPytools. The layout of the code is based on bamtools by Derek Barnett.
C++ C
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Fasta.cpp
Fasta.h
Fasta.o
LargeFileSupport.h
Makefile
Mosaik.h
SmithWatermanGotoh.cpp
SmithWatermanGotoh.h
SmithWatermanGotoh.o
bed.cpp
bed.h
bed.o
bedStructure.cpp
bedStructure.h
bedStructure.o
fasta_reference.cpp
fasta_reference.h
genotype_info.cpp
genotype_info.h
header.cpp
header.h
info.cpp
info.h
info.o
intersect.cpp
intersect.cpp~
intersect.h
intersect.o
modify_alleles.cpp
modify_alleles.h
output.cpp
output.h
samples.cpp
samples.h
samples.o
split.cpp
split.h
split.o
stats.cpp
stats.h
stats.o
structures.h
symbolic_alternates.cpp
symbolic_alternates.h
temp.cpp
tool_annotate.cpp
tool_annotate.h
tool_annotate.o
tool_distributions.cpp
tool_distributions.h
tool_distributions.o
tool_filter.cpp
tool_filter.h
tool_filter.o
tool_intersect.cpp
tool_intersect.cpp.bk
tool_intersect.h
tool_intersect.o
tool_merge.cpp
tool_merge.h
tool_merge.o
tool_stats.cpp
tool_stats.h
tool_stats.o
tool_temp.cpp
tool_temp.h
tool_validate.cpp
tool_validate.h
tool_validate.o
tools.cpp
tools.h
tools.o
trim_alleles.o
variant.cpp
variant.h
variant.o
vcf.cpp
vcf.h
vcf.o
vcfCTools.cpp
vcfCTools_tool.h
vcfCTools_version.h
vcf_aux.cpp
vcf_aux.h
vcf_aux.o