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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 335 149

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 21 13

Repositories

Showing 10 of 374 repositories
  • cell_type_mapper Public

    Repository for storing prototype functionality implementations for the BKP

    AllenInstitute/cell_type_mapper’s past year of commit activity
    Python 10 2 4 0 Updated Jul 21, 2024
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES’s past year of commit activity
    IGOR Pro 21 6 282 11 Updated Jul 20, 2024
  • cplAE_MET Public

    Coupled autoencoder extension for MET analysis.

    AllenInstitute/cplAE_MET’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jul 19, 2024
  • skeleton_plot Public

    tools for plotting swc and meshparty skeletons

    AllenInstitute/skeleton_plot’s past year of commit activity
    Jupyter Notebook 3 3 0 0 Updated Jul 19, 2024
  • npc_lims Public

    Tools to fetch and update paths, metadata and state for Mindscope Neuropixels sessions, in the cloud.

    AllenInstitute/npc_lims’s past year of commit activity
    Python 0 MIT 0 7 1 Updated Jul 19, 2024
  • openscope_databook Public

    OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈

    AllenInstitute/openscope_databook’s past year of commit activity
    Python 60 18 9 1 Updated Jul 19, 2024
  • deep-neurographs Public

    Neuron reconstruction framework that detects and corrects false splits in a predicted segmentation.

    AllenInstitute/deep-neurographs’s past year of commit activity
    Python 2 MIT 0 0 1 Updated Jul 19, 2024
  • scrattch.mapping Public

    Genearlized mapping scripts for RNA-seq and Patch-seq data

    AllenInstitute/scrattch.mapping’s past year of commit activity
    R 5 2 6 0 Updated Jul 18, 2024
  • mtrain_regimens Public

    Repository to track training stages and regimens for visual behavior

    AllenInstitute/mtrain_regimens’s past year of commit activity
    Python 2 4 14 0 Updated Jul 18, 2024
  • npc_sessions_cache Public

    Scripts, notebooks and plots that operate on NWB or NWB-like objects from `npc_sessions` in the cloud.

    AllenInstitute/npc_sessions_cache’s past year of commit activity
    Python 0 0 0 0 Updated Jul 18, 2024

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