{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":757677070,"defaultBranch":"main","name":"aind-z1-spot-detection","ownerLogin":"AllenNeuralDynamics","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2024-02-14T19:39:37.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/95304558?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1718322273.0","currentOid":""},"activityList":{"items":[{"before":"049a03d17a26ce73c2407293f5c5268256338758","after":"94f0c03e74c27d072d27814b71a88b8cd2304879","ref":"refs/heads/feat-estimate-grounds","pushedAt":"2024-06-14T23:53:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"checking error when background foreground estimation fails with a bad spot","shortMessageHtmlLink":"checking error when background foreground estimation fails with a bad…"}},{"before":"9123ea40f9b8c7460fd30b12e6ab6c3cd3644e76","after":"049a03d17a26ce73c2407293f5c5268256338758","ref":"refs/heads/feat-estimate-grounds","pushedAt":"2024-06-14T19:03:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"removing prints","shortMessageHtmlLink":"removing prints"}},{"before":"a61f1ea2707372f07af62d2bf2f1dccb0d11210c","after":"9123ea40f9b8c7460fd30b12e6ab6c3cd3644e76","ref":"refs/heads/feat-estimate-grounds","pushedAt":"2024-06-14T18:50:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"removing break for testing","shortMessageHtmlLink":"removing break for testing"}},{"before":"97d1c7f106ddae74a61b970793a8db33c53b12c1","after":"a61f1ea2707372f07af62d2bf2f1dccb0d11210c","ref":"refs/heads/feat-estimate-grounds","pushedAt":"2024-06-14T18:49:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"chaging spot detection dtype to include new columns in the detection","shortMessageHtmlLink":"chaging spot detection dtype to include new columns in the detection"}},{"before":"afb6b313141a5c5adf106e9d97f3219dabf98af5","after":"97d1c7f106ddae74a61b970793a8db33c53b12c1","ref":"refs/heads/feat-estimate-grounds","pushedAt":"2024-06-14T18:05:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"setting axis order to ZYX in fg condition","shortMessageHtmlLink":"setting axis order to ZYX in fg condition"}},{"before":"383423d7e5f2310c6f7dc66b9a21d7a893e29d63","after":"afb6b313141a5c5adf106e9d97f3219dabf98af5","ref":"refs/heads/feat-estimate-grounds","pushedAt":"2024-06-13T23:53:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"removing spot from the estimation parameters","shortMessageHtmlLink":"removing spot from the estimation parameters"}},{"before":null,"after":"383423d7e5f2310c6f7dc66b9a21d7a893e29d63","ref":"refs/heads/feat-estimate-grounds","pushedAt":"2024-06-13T23:44:33.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"adding background and foreground estimation","shortMessageHtmlLink":"adding background and foreground estimation"}},{"before":"56918f4df6385451f6f8b1eaa02248427c9bfaf3","after":"fb29facee82b49822f3843f5377562d8e7ecb0d0","ref":"refs/heads/refactor-spot-functions","pushedAt":"2024-04-17T21:01:58.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"merging latest changes from main","shortMessageHtmlLink":"merging latest changes from main"}},{"before":"79b77fc475e7217ae8e07ce3df8b4cee038a5235","after":"46f4eb4d0609001a4ad0d04b7bed37acd6e860f5","ref":"refs/heads/main","pushedAt":"2024-04-17T20:59:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"Latest changes from main","shortMessageHtmlLink":"Latest changes from main"}},{"before":null,"after":"56918f4df6385451f6f8b1eaa02248427c9bfaf3","ref":"refs/heads/refactor-spot-functions","pushedAt":"2024-04-17T20:52:19.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"running linters and updating documentation","shortMessageHtmlLink":"running linters and updating documentation"}},{"before":"5d7c0e8937109f39e87194bcf419e128bc1d59e1","after":"79b77fc475e7217ae8e07ce3df8b4cee038a5235","ref":"refs/heads/main","pushedAt":"2024-04-09T16:53:15.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"setting int32 in detection","shortMessageHtmlLink":"setting int32 in detection"}},{"before":"2cc9192b64278528ca29b60ce30e62efd87cb1c4","after":"5d7c0e8937109f39e87194bcf419e128bc1d59e1","ref":"refs/heads/main","pushedAt":"2024-04-03T20:33:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"updating documentation and removing unused variables after the upgrade","shortMessageHtmlLink":"updating documentation and removing unused variables after the upgrade"}},{"before":"ecaa1afbc09fd46ae87b5a0d2320e99be8c4d7ba","after":"2cc9192b64278528ca29b60ce30e62efd87cb1c4","ref":"refs/heads/main","pushedAt":"2024-04-03T19:57:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"prunning points in padding area based on global coordinates","shortMessageHtmlLink":"prunning points in padding area based on global coordinates"}},{"before":"d91d82def2d36105ebd0062eefce5be7047092a6","after":"ecaa1afbc09fd46ae87b5a0d2320e99be8c4d7ba","ref":"refs/heads/main","pushedAt":"2024-04-02T21:21:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"setting padding back to non-linear filtering","shortMessageHtmlLink":"setting padding back to non-linear filtering"}},{"before":"a3b4dcc0666d4b705cd64cf29639abbcc94012af","after":"d91d82def2d36105ebd0062eefce5be7047092a6","ref":"refs/heads/main","pushedAt":"2024-04-02T18:56:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"Fixing bug in maximum filter","shortMessageHtmlLink":"Fixing bug in maximum filter"}},{"before":"3936e1f016e4f8337a7bf213be7ae815d226b006","after":"a3b4dcc0666d4b705cd64cf29639abbcc94012af","ref":"refs/heads/main","pushedAt":"2024-04-02T00:01:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"quick fix to zyx validation","shortMessageHtmlLink":"quick fix to zyx validation"}},{"before":"6faa331570e8d66cb0d4aeda2a1920df7ba7c1a7","after":"3936e1f016e4f8337a7bf213be7ae815d226b006","ref":"refs/heads/main","pushedAt":"2024-04-01T19:56:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"Major package version bump","shortMessageHtmlLink":"Major package version bump"}},{"before":"3b189377872ed1dc288f574dbe583fd9ea04c5fe","after":"6faa331570e8d66cb0d4aeda2a1920df7ba7c1a7","ref":"refs/heads/main","pushedAt":"2024-04-01T19:54:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"adding optional IDs to the spots coming from the optional segmentation mask","shortMessageHtmlLink":"adding optional IDs to the spots coming from the optional segmentatio…"}},{"before":"de06e45ac33dcbb304913e53cd9d051df8891af6","after":"3b189377872ed1dc288f574dbe583fd9ea04c5fe","ref":"refs/heads/main","pushedAt":"2024-03-29T21:08:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"Edited Dockerfile","shortMessageHtmlLink":"Edited Dockerfile"}},{"before":"f40c9941f3825121a2cca7a5b68861150b6df278","after":"de06e45ac33dcbb304913e53cd9d051df8891af6","ref":"refs/heads/main","pushedAt":"2024-03-29T20:56:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"Saving spots as numpy array","shortMessageHtmlLink":"Saving spots as numpy array"}},{"before":"97dc8df3204dbba18e846426e7eae90f398a0031","after":null,"ref":"refs/heads/feat-masked-puncta","pushedAt":"2024-03-28T22:53:00.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"}},{"before":"d1813f9a89cf55bf307ee335fe422d9169223648","after":"f40c9941f3825121a2cca7a5b68861150b6df278","ref":"refs/heads/main","pushedAt":"2024-03-28T22:52:57.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"Merge pull request #1 from AllenNeuralDynamics/feat-masked-puncta\n\nFeat masked puncta","shortMessageHtmlLink":"Merge pull request #1 from AllenNeuralDynamics/feat-masked-puncta"}},{"before":"fff68f2abf7e5c0e2b617e5d71719cde7b83faa1","after":"97dc8df3204dbba18e846426e7eae90f398a0031","ref":"refs/heads/feat-masked-puncta","pushedAt":"2024-03-28T20:00:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"including metadata from zarr dataset and using global coord space","shortMessageHtmlLink":"including metadata from zarr dataset and using global coord space"}},{"before":"59dc89691f942c20c34a7708826689132ca49e90","after":"fff68f2abf7e5c0e2b617e5d71719cde7b83faa1","ref":"refs/heads/feat-masked-puncta","pushedAt":"2024-03-27T17:58:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"Updating parameters and loggers","shortMessageHtmlLink":"Updating parameters and loggers"}},{"before":"2d6d28250d4f830c8584f35f16ede9abb85c764e","after":"59dc89691f942c20c34a7708826689132ca49e90","ref":"refs/heads/feat-masked-puncta","pushedAt":"2024-03-27T17:43:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"updating rna detection to multiple workers and segmentation masks","shortMessageHtmlLink":"updating rna detection to multiple workers and segmentation masks"}},{"before":"e07edff4dc766bc732fe8072d4c220806dca6ef4","after":"2d6d28250d4f830c8584f35f16ede9abb85c764e","ref":"refs/heads/feat-masked-puncta","pushedAt":"2024-03-26T23:22:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"setting parallel workers and masked puncta detection","shortMessageHtmlLink":"setting parallel workers and masked puncta detection"}},{"before":null,"after":"e07edff4dc766bc732fe8072d4c220806dca6ef4","ref":"refs/heads/feat-masked-puncta","pushedAt":"2024-03-21T16:58:52.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"masking puncta using cell segmentation mask","shortMessageHtmlLink":"masking puncta using cell segmentation mask"}},{"before":"38d776af89911a99330d0045578ea0714d1b3f87","after":"d1813f9a89cf55bf307ee335fe422d9169223648","ref":"refs/heads/main","pushedAt":"2024-02-14T20:20:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"updating repository with all the code created in an isolated code ocean capsule","shortMessageHtmlLink":"updating repository with all the code created in an isolated code oce…"}},{"before":null,"after":"38d776af89911a99330d0045578ea0714d1b3f87","ref":"refs/heads/main","pushedAt":"2024-02-14T19:39:40.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"camilolaiton","name":"Camilo Laiton","path":"/camilolaiton","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/36769694?s=80&v=4"},"commit":{"message":"Initial commit","shortMessageHtmlLink":"Initial commit"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEZesCqAA","startCursor":null,"endCursor":null}},"title":"Activity · AllenNeuralDynamics/aind-z1-spot-detection"}