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@Arabidopsis-Information-Portal

Araport

The Arabidopsis Information Portal

Pinned

  1. adama Public

    Adaptible Data And Microservices API

    JavaScript 6 3

  2. intermine Public

    Forked from intermine/intermine

    This is the code base for Thalemine, a data warehouse system based on InterMine and used in Araport, the Arabidopsis Information Portal.

    Java 4 2

  3. jbrowse Public

    Forked from GMOD/jbrowse

    A modern genome browser built with JavaScript and HTML5.

    JavaScript 2 3

  4. Agave and Docker build files for the back end of our BLAST app

    Shell 1

  5. Drupal module for the Araport Science Apps Workspace.

    PHP 1 1

  6. Yeoman Generator for building Science Apps for the Arabidopsis Information Portal.

    JavaScript 2 2

Repositories

  • adama Public

    Adaptible Data And Microservices API

    JavaScript 6 3 39 16 Updated Jul 6, 2022
  • adamalib Public

    A Python library for using Adama

    Jupyter Notebook 3 3 0 3 Updated Jul 6, 2022
  • JavaScript 0 1 0 9 Updated Jun 22, 2022
  • ComboTrackSelector Public

    Plugin to allow the co-existence of the Hierarchical and Faceted Track Selectors in the GMOD JBrowse Genome Browser

    JavaScript 5 MIT 4 2 0 Updated Mar 18, 2019
  • thalemine Public

    ThaleMine - an InterMine with Arabidopsis genomic data

    Java 0 0 0 0 Updated Mar 22, 2018
  • thalemine-bio-sources Public

    Data Sources for ThaleMine - an InterMine with Arabidopsis genomic data

    Java 0 1 0 0 Updated Mar 16, 2018
  • intermine-scripts Public

    All scripts that used to be in the main intermine repository in bio/scripts and intermine/scripts

    PLpgSQL 0 LGPL-2.1 10 0 0 Updated Mar 16, 2018
  • jbrowse-contrib Public

    Configuration and miscellaneous support files for Araport JBrowse installation

    Shell 3 LGPL-2.1 3 0 0 Updated Feb 12, 2018
  • intermine Public

    This is the code base for Thalemine, a data warehouse system based on InterMine and used in Araport, the Arabidopsis Information Portal.

    Java 4 349 0 0 Updated Feb 7, 2018
  • small_orfs_to_jbrowse Public

    ADAMA web-service wrapper to transform "Translated small ORFs" GFF3 data (Hsu et al. 2016) into JBrowse compatible JSON

    Python 0 0 0 0 Updated Jan 14, 2018

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