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Update README.md

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philthiel authored and tkemmer committed Jan 23, 2017
1 parent 8977951 commit a58661fd95af93696dc73a2ef145a6be2f21e45e
Showing with 18 additions and 13 deletions.
  1. +18 −13 workflow_support/galaxy/README.md
@@ -7,19 +7,24 @@ and excluded from default build targets.
The following configure options are provided as CMake flags:
-- BALL_BUILD_BALLAXY (default: ON)
-Builds required Galaxy [ToolConfig]s to include BALL TOOLS in a Galaxy instance.
-Additionally, build the BALLAXY plugin for BALLView, if required dependencies are met
-(Qt5 WebEngine, BALL VIEW target available)
-- BALLAXY_INSTANCE (default: OFF)
-Additionally, create a fully configured Galaxy instance that includes BALLAXY.
-If ballaxy target has successfully been built, the Galaxy instance can be started
-using the bash script run_ballaxy.sh from the projects binary dir (usually
-'ball_build_dir/workflow_support/galaxy/').
-- GALAXY_RELEASE (default: 'release_16.10')
-If a full Galaxy instance is created (BALLAXY_INSTANCE=ON), this parameter can be used
-to specify the Galaxy release to be used. In fact, this string has to be a valid branch name
-of the [Galaxy GitHub repository].
+- BALL_BUILD_BALLAXY (default: ON):
+
+ Builds required Galaxy [ToolConfig]s to include BALL TOOLS in a Galaxy instance.
+ Additionally, build the BALLAXY plugin for BALLView, if required dependencies are met
+ (Qt5 WebEngine, BALL VIEW target available)
+
+- BALLAXY_INSTANCE (default: OFF):
+
+ Additionally, create a fully configured Galaxy instance that includes BALLAXY.
+ If ballaxy target has successfully been built, the Galaxy instance can be started
+ using the bash script run_ballaxy.sh from the projects binary dir
+ (usually 'ball_build_dir/workflow_support/galaxy/').
+
+- GALAXY_RELEASE (default: 'release_16.10'):
+
+ If a full Galaxy instance is created (BALLAXY_INSTANCE=ON), this parameter can be used
+ to specify the Galaxy release to be used. In fact, this string has to be a valid
+ branch name of the [Galaxy GitHub repository].
For a detailed description how a working Ballaxy instance can be setup using the BALL Galaxy ToolConfigs,
please have a look at the corresponding [Galaxy documentation] and a configured BALLAXY setup script

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