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Commits on Mar 3, 2013
  1. @hjmjohnson

    ENH: MIGRATION TO BRAINSTools

    We are migrating all activities to the new repository:
    
    https://github.com/BRAINSia/BRAINSTools
    hjmjohnson committed Mar 3, 2013
Commits on Mar 1, 2013
  1. @hjmjohnson
  2. @hjmjohnson

    ENH: Update ITK.

    hjmjohnson committed Mar 1, 2013
Commits on Feb 22, 2013
  1. @hjmjohnson

    Merge pull request #202 from aghayoor/cppcheck_warnings

    cppcheck warnings that are marked as warning
    hjmjohnson committed Feb 22, 2013
  2. @aghayoor
  3. @hjmjohnson

    Merge pull request #201 from aghayoor/cppcheck_style

    cppcheck style warnings
    hjmjohnson committed Feb 22, 2013
  4. @aghayoor

    cppcheck style warnings

    aghayoor committed Feb 22, 2013
  5. @hjmjohnson
  6. @hjmjohnson

    Merge pull request #200 from aghayoor/cppcheck_performance

    Fix ccppcheck performance warnings for the BRAINSStandAlone
    hjmjohnson committed Feb 22, 2013
Commits on Feb 21, 2013
  1. @aghayoor

    Merge pull request #199 from aghayoor/BCD_testFailure

    Fix test failures of BRAINSConstellationDetector
    aghayoor committed Feb 21, 2013
  2. @aghayoor
Commits on Feb 19, 2013
  1. @aghayoor

    Fix test failures of BRAINSConstellationDetector

    Some of the BCD tests were failing because of recent changes on how we
    write float numbers as strings.
    The results have not changed; just the way they are presented (the
        precision of the floating numbers) have changed. Therefore, I just
    replaced the previous baselines by the modified versions.
    aghayoor committed Feb 19, 2013
Commits on Feb 18, 2013
  1. @hjmjohnson

    Merge pull request #196 from dmwelch/bug/brains-module

    brains Python module fix for incorrect WM thresholds
    hjmjohnson committed Feb 18, 2013
  2. @hjmjohnson

    Merge pull request #198 from dmwelch/enh/pep8

    GIT: added pep8 configuration file and appended to .gitignore
    hjmjohnson committed Feb 18, 2013
  3. @dmwelch

    BUG: Fixed faulty thresholds for WM partial volumes

    STYLE: Renamed posteriors list to partials
    dmwelch committed Feb 7, 2013
  4. @dmwelch
  5. @aghayoor

    Merge pull request #195 from aghayoor/BRAINSFit_SyNTestFailures

    Increase the testing time for the BRAINSFit tests
    aghayoor committed Feb 18, 2013
  6. @aghayoor
Commits on Feb 16, 2013
  1. @hjmjohnson
  2. @matsuij @hjmjohnson

    ENH: Add DWI scan padding

    Now pads image on all sides
    matsuij committed with hjmjohnson Feb 7, 2013
Commits on Feb 15, 2013
  1. COMP: Capitalization of header name fixed

    Kent Williams committed Feb 15, 2013
  2. @hjmjohnson
Commits on Feb 14, 2013
  1. Merge pull request #194 from Chaircrusher/BValue_Format

    COMP: fix format for BValue in DWIConvert
    Kent Williams committed Feb 14, 2013
  2. COMP: fix format for BValue in DWIConvert

    Kent Williams committed Feb 14, 2013
Commits on Feb 12, 2013
  1. @aghayoor @hjmjohnson

    BUG: Fix the "ImageCalculator2DHisteqTest" error

    I used the proper images for the input and replaced the baseline.
    Comprehensive explanations are given in PREDICTIMG-1684 jira ticket.
    aghayoor committed with hjmjohnson Feb 8, 2013
Commits on Feb 7, 2013
  1. Merge pull request #189 from Chaircrusher/GTractResampleInPlaceBug

    BUG: check wrong var when writing out gradient vectors
    Kent Williams committed Feb 7, 2013
  2. BUG: check wrong var when writing out gradient vectors

    Kent Williams committed Feb 7, 2013
  3. Merge pull request #188 from Chaircrusher/DoubleConversionFixes

    BUG: Compile errors w/packages turned off by default.
    Kent Williams committed Feb 7, 2013
  4. BUG: Compile errors w/packages turned off by default.

    Kent Williams committed Feb 7, 2013
  5. @hjmjohnson

    COMP: Avoid continuous rebuild of ExternalPackages

    New option added to that defaults to off for FORCE_EXTERNAL_BUILDS.
    This needs to be turned ON to allow updating of external packages.
    
    Needed to split the ExternalProject command and argument into separate
    varables for their effect to work.  Otherwise they were having no
    noticiable effect on the build system.
    hjmjohnson committed Feb 7, 2013
  6. Merge pull request #187 from Chaircrusher/IOStreamDoubleConversion

    COMP: Review use of iostream & use double-conversion where needed
    Kent Williams committed Feb 7, 2013
Commits on Feb 6, 2013
  1. Merge pull request #186 from Chaircrusher/NumericPrecisionFixes

    BUG: use consistent accurate string representation of floating point
    Kent Williams committed Feb 6, 2013
Commits on Feb 5, 2013
  1. @hjmjohnson

    BUG: Logic for re-running data sinks was incorrect

    The logic for re-running data sinks was not correct.
    hjmjohnson committed Feb 5, 2013