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BRAINSCreateLabelMapFromProbabilityMaps
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BRAINSMultiSTAPLE
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BRAINSRefacer
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DWI_TestData_OUTPUTS
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DWI_TestData_TARBALLS
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FindCenter
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Transforms_h5
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benchmark
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0036195-T1T2_ACPC_Talairach_LabelMap.nii.gz.md5
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0036195-T1T2_leftTissueClass.nii.gz.md5
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0036195-T1T2_leftTissueClass_genus0.nii.gz.md5
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0036195-T1T2_left_130_binary.nii.gz.md5
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0036195_AssignArray.vtk.md5
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0036195_ClampScalars.vtk.md5
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0036195_SurfaceGeneration.vtk.md5
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0036195_leftSurfaceFeatures.vtk.md5
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0036195_leftTalLabels.vtk.md5
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0036195_leftTissueClass130.vtk.md5
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0036195_leftTissueClassGenus0.vtk.md5
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0036195_left_49Labels.vtk.md5
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0036195_left_5000_smoothed.vtk.md5
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0036195_left_5000_sphere0.vtk.md5
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0036195_left_5000_sphere1.vtk.md5
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0036195_left_sphere.vtk.md5
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0036195_left_sphereIC4.vtk.md5
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0036195_left_sphereIC5.vtk.md5
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0036195_left_sphereIC6.vtk.md5
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0036195_left_sphereIC7.vtk.md5
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0036195_left_sphere_distToHull.vtk.md5
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0036195_left_transformedLabelMap.nii.gz.md5
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0036896_left_sphere.vtk.md5
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0036896_left_sphereIC4.vtk.md5
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0036896_left_sphereIC5.vtk.md5
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0036896_left_sphereIC6.vtk.md5
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0036896_left_sphereIC7.vtk.md5
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0036896_to_0036195_hmIC4.vtk.md5
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0436396_left_BRAINSLabels.vtk.md5
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0436396_left_ManualLabels.vtk.md5
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2.nii.gz.md5
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2_EMSP.nrrd.md5
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62772808_left_surface_tal.vtk.md5
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ANON0006_20_T1_dbg_splayed.nii.gz.md5
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ANON0006_20_T1_sag_twisted.nii.gz.md5
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AllFifties.png.md5
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AllFiveHundreds.png.md5
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AllHundreds.png.md5
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AllTens.png.md5
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AllTwos.hdr.md5
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AllTwos.img.md5
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AllZeroes.png.md5
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AtlasToSubjectScan1.mat.md5
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AtlasToSubjectScan2.mat.md5
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AtlasToSubjectScan3.mat.md5
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AtlasToSubjectScan4.mat.md5
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AverageHullOn0036195.vtk.md5
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BCDTestForLandmarkCompare_standard.nrrd.md5
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BCDTest_T1_outputResampledVolume_standard.nrrd.md5
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BCDTest_T1_outputVolume_standard.nrrd.md5
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BCDTest_acLowerBound_standard.nrrd.md5
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BCDTest_backgroundValue_standard.nrrd.md5
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BCDTest_cutOutHeadInOutputResampledVolume_standard.nrrd.md5
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BCDTest_cutOutHeadInOutputVolume_standard.nrrd.md5
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BCDTest_forceHoughReportFailure_standard.nii.gz.md5
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BCDTest_inputLandmarksEMSP_standard.nrrd.md5
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BCDTest_interpolationMode_standard.nrrd.md5
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BCDTest_mspLevel_standard.nrrd.md5
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BCDTest_otsuThreshold_standard.nrrd.md5
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BCDTest_outputUntransformedClippedVolume_standard.nrrd.md5
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BCDTest_rVN4-rpc-rac-rmpj_standard.nrrd.md5
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BCDTest_rVN4_standard.nrrd.md5
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BCDTest_rac_standard.nrrd.md5
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BCDTest_rescaleIntensityRange_standard.nrrd.md5
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BCDTest_rescaleIntensity_standard.nrrd.md5
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BCDTest_rmpj_standard.nrrd.md5
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BCDTest_rpc_standard.nrrd.md5
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BCDTest_trimRescaledIntensities_standard.nrrd.md5
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BCDTest_writeBranded2DImage_standard.nrrd.md5
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BCDTest_writeBranded2DImage_standard.png.md5
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BRAINSABCSmallExtendedAtlasDefinition.xml.md5
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BRAINSABCSmallLabels.nii.gz.md5
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BRAINSABCSmall_T1.nii.gz.md5
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BRAINSABCSmall_T1_offset.nii.gz.md5
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BRAINSABCSmall_T2.nii.gz.md5
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BRAINSABCSmall_atlas_to_subject_transform.h5.md5
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BRAINSAlignMSPTest_T1_standard.nrrd.md5
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BRAINSContinuousClassTest_baseline.nii.gz.md5
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BRAINSCutTemplateToScan3.h5.md5
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BRAINSCutcaudate_left_scan3_baseline.nii.gz.md5
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BRAINSCutcaudate_right_scan3_baseline.nii.gz.md5
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BRAINSCutputamen_left_scan3_baseline.nii.gz.md5
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BRAINSCutputamen_right_scan3_baseline.nii.gz.md5
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BRAINSEyeDetectorTest_T1_standard.nii.gz.md5
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BRAINSEyeDetectorTest_T1_standard.nrrd.md5
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BRAINSFitTest_AffineRotationMasks.mat.md5
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BRAINSFitTest_AffineRotationMasks.result.nii.gz.md5
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BRAINSFitTest_AffineRotationNoMasks.result.nii.gz.md5
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BRAINSFitTest_AffineScaleMasks.result.nii.gz.md5
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BRAINSFitTest_AffineScaleNoMasks.result.nii.gz.md5
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BRAINSFitTest_AffineTranslationMasks.result.nii.gz.md5
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BRAINSFitTest_AffineTranslationNoMasks.result.nii.gz.md5
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BRAINSFitTest_BSplineAnteScaleRotationRescaleHeadMasks.mat.md5
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BRAINSFitTest_BSplineAnteScaleRotationRescaleHeadMasks.result.nii.gz.md5
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BRAINSFitTest_BSplineBSplineRescaleHeadMasks.result.nii.gz.md5
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BRAINSFitTest_BSplineOnlyRescaleHeadMasks.result.nii.gz.md5
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BRAINSFitTest_BSplineScaleRotationHeadMasksUShort.result.nii.gz.md5
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BRAINSFitTest_BSplineScaleRotationHistogramHeadMasks.result.nii.gz.md5
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BRAINSFitTest_BSplineScaleRotationHistogramHeadMasksUShort.result.nii.gz.md5
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BRAINSFitTest_BSplineScaleRotationRescaleHeadMasks.result.nii.gz.md5
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BRAINSFitTest_Initializer_RigidRotationNoMasks.mat.md5
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BRAINSFitTest_KSAffineRotationMasks.result.nii.gz.md5
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BRAINSFitTest_KSScaleSkewVersorRotationMasks.result.nii.gz.md5
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BRAINSFitTest_MCAffineRotationMasks.result.nii.gz.md5
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BRAINSFitTest_MCScaleSkewVersorRotationMasks.result.nii.gz.md5
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BRAINSFitTest_MIHAffineRotationMasks.result.nii.gz.md5
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BRAINSFitTest_MIHScaleSkewVersorRotationMasks.result.nii.gz.md5
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BRAINSFitTest_MSEAffineRotationMasks.result.nii.gz.md5
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BRAINSFitTest_MSEScaleSkewVersorRotationMasks.result.nii.gz.md5
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BRAINSFitTest_NCAffineRotationMasks.result.nii.gz.md5
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BRAINSFitTest_NCScaleSkewVersorRotationMasks.result.nii.gz.md5
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BRAINSFitTest_ROIBSpline.result.1.nrrd.md5
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BRAINSFitTest_ROIBSpline.result.nrrd.md5
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BRAINSFitTest_ROIBSpline.test.nrrd.md5
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BRAINSFitTest_RigidAnisotropicMasks.result.nii.gz.md5
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BRAINSFitTest_RigidMedianRotationNoMasks.result.nii.gz.md5
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BRAINSFitTest_RigidRotGeomNoMasks.result.nii.gz.md5
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BRAINSFitTest_RigidRotaRotaRotNoMasks.result.nii.gz.md5
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BRAINSFitTest_RigidRotationHeadMasks.result.nii.gz.md5
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BRAINSFitTest_RigidRotationMasks.result.nii.gz.md5
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BRAINSFitTest_RigidRotationNoMasks.mat.md5
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BRAINSFitTest_RigidRotationNoMasks.result.nii.gz.md5
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BRAINSFitTest_RigidRotationNoMasksRiginInPlaceInterp.result.nii.gz.md5
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BRAINSFitTest_ScaleRotationRescaleHeadMasksNoInit.result.nii.gz.md5
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BRAINSFitTest_ScaleSkewVersorRotationMasks.result.nii.gz.md5
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BRAINSFitTest_ScaleSkewVersorRotationNoMasks.result.nii.gz.md5
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BRAINSFitTest_ScaleSkewVersorScaleMasks.result.nii.gz.md5
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BRAINSFitTest_ScaleSkewVersorScaleNoMasks.result.nii.gz.md5
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BRAINSFitTest_ScaleTranslationRescaleHeadMasksInit.result.nii.gz.md5
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BRAINSFitTest_ScaleTranslationRescaleHeadMasksNoInit.result.nii.gz.md5
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BRAINSFitTest_ScaleVersorRotationMasks.result.nii.gz.md5
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BRAINSFitTest_ScaleVersorRotationNoMasks.result.nii.gz.md5
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BRAINSFitTest_ScaleVersorScaleMasks.result.nii.gz.md5
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BRAINSFitTest_ScaleVersorScaleNoMasks.result.nii.gz.md5
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BRAINSPosteriorToContinuousClassTest.result.nii.gz.md5
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BRAINSROIAutoTest_GenerateBrainMask.result.nii.gz.md5
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BRAINSTrimForegroundInDirectionTest_T1_standard.nrrd.md5
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BigEndian.mhd.md5
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BigEndian.raw.md5
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CombineLabel0036195.vtk.md5
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DWI_test1.nrrd.md5
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EMSP.fcsv.md5
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GTRACTTest_gtractAverageBvalues.standard.nrrd.md5
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GTRACTTest_gtractConcatDwi.standard.nrrd.md5
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GTRACTTest_gtractResampleDWIInPlace.standard.nrrd.md5
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GTRACTTest_gtractResampleDWIInPlace_Rot-15z.standard.nrrd.md5
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GTRACTTest_gtractResampleDWIInPlace_Rot15z.standard.nrrd.md5
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GTRACTTest_gtractResampleDWIInPlace_Rot30x.standard.nrrd.md5
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GTRACTTest_gtractResampleDWIInPlace_Rot30y.standard.nrrd.md5
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GTRACTTest_gtractResampleDWIInPlace_Rot45z.standard.nrrd.md5
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GTRACTTest_gtractResampleDWIInPlace_rigid_transform.mat.md5
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GTRACTTest_rigidTx_Rot-15z.h5.md5
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GTRACTTest_rigidTx_Rot15z.h5.md5
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GTRACTTest_rigidTx_Rot30x.h5.md5
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GTRACTTest_rigidTx_Rot30y.h5.md5
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GTRACTTest_rigidTx_Rot45z.h5.md5
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GaussianIOFilteringTest.png.md5
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Hundred.hdr.md5
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Hundred.img.md5
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InitialDisplacementField.nii.gz.md5
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Initializer_0.05_BRAINSFitTest_AffineRotationNoMasks.mat.md5
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Initializer_0.05_BRAINSFitTest_AffineScaleNoMasks.mat.md5
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Initializer_0.05_BRAINSFitTest_RigidRotationHeadMasks.mat.md5
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Initializer_0.05_BRAINSFitTest_RigidRotationNoMasks.mat.md5
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Initializer_0.05_BRAINSFitTest_RigidRotationNoMasksRiginInPlaceInterp.mat.md5
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Initializer_0.05_BRAINSFitTest_ScaleSkewVersorRotationNoMasks.mat.md5
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Initializer_0.05_BRAINSFitTest_ScaleSkewVersorScaleNoMasks.mat.md5
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Initializer_0.05_BRAINSFitTest_ScaleVersorRotationNoMasks.mat.md5
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Initializer_0.05_BRAINSFitTest_ScaleVersorScaleNoMasks.mat.md5
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Initializer_BRAINSFitTest_BSplineAnteScaleRotationRescaleHeadMasks.mat.md5
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Initializer_BRAINSFitTest_BSplineOnlyRescaleHeadMasks.mat.md5
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Initializer_BRAINSFitTest_TranslationRescaleHeadMasks.mat.md5
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LowerHalfHundreds.png.md5
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OutDefField.nii.gz.md5
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OutDefField_orientedImage.nii.gz.md5
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Piecewised_IC4.vtk.md5
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ProbabilityLabels.vtk.md5
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ProstateIntraop.nrrd.md5
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ProstateIntraopMask.nrrd.md5
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ProstatePreop.nrrd.md5
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ProstatePreopMask.nrrd.md5
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RearrangedLabels.vtk.md5
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Removed21And37From49Labels.vtk.md5
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SUBJ_A_small_T1.nii.gz.md5
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SUBJ_A_small_T2.nii.gz.md5
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SUBJ_A_small_T2_mask.nii.gz.md5
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SUBJ_A_small_brain_cut_mask.nii.gz.md5
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SUBJ_B_small_T1.nii.gz.md5
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SUBJ_B_small_T2.nii.gz.md5
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SUBJ_B_small_T2_mask.nii.gz.md5
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SUBJ_B_small_brain_cut_mask.nii.gz.md5
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SimpleSurface1.vtk.md5
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SimpleSurface1_IC4.vtk.md5
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SimpleSurface2.vtk.md5
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SimpleSurface2_IC4.vtk.md5
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SimpleSurfaceIC4.vtk.md5
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SmoothedScalar_IC4.vtk.md5
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SubjectToAtlasScan1.mat.md5
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SubjectToAtlasScan2.mat.md5
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SurfaceColor.vtk.md5
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SurfaceLabelCleanUp.vtk.md5
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T1-2ndVersion.mdl.md5
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T1.mdl.md5
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T1.nii.gz.md5
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T1_50Lmks.mdl.md5
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TrainingCase1.fcsv.md5
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TrainingCase1_T1.nii.gz.md5
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TrainingCase2.fcsv.md5
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TrainingCase2_T1.nii.gz.md5
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TrainingCase3.fcsv.md5
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TrainingCase3_T1.nii.gz.md5
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TwoHundred.hdr.md5
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TwoHundred.img.md5
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UpperHalfHundreds.png.md5
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ValidateBRAINSResampleTest7.result.nii.gz.md5
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ValidateInitialTransform_Test.nii.gz.md5
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ValidateOrientedImagesTest5.nii.gz.md5
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ValidateVectorOrientedImagesTest6.nii.gz.md5
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ValidateVectorOrientedImagesTest7.nii.gz.md5
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affine_t1.nrrd.md5
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affine_t2.nrrd.md5
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applyWarp1.nii.gz.md5
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applyWarp2.nii.gz.md5
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applyWarp_BSpline.mat.md5
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chk_BCDTest_ForceACPoint_standard.fcsv.md5
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chk_BCDTest_ForcePCPoint_standard.fcsv.md5
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chk_BCDTest_ForceRPPoint_standard.fcsv.md5
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chk_BCDTest_ForceVN4Point_standard.fcsv.md5
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chk_GTRACTTest_gtractResampleDWIInPlace_Rot-15z_metaData.standard.csv.md5
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chk_GTRACTTest_gtractResampleDWIInPlace_Rot15z_metaData.standard.csv.md5
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chk_GTRACTTest_gtractResampleDWIInPlace_Rot30x_metaData.standard.csv.md5
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chk_GTRACTTest_gtractResampleDWIInPlace_Rot30y_metaData.standard.csv.md5
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chk_GTRACTTest_gtractResampleDWIInPlace_Rot45z_metaData.standard.csv.md5
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chk_GTRACTTest_gtractResampleDWIInPlace_referenceMetaData.csv.md5
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chk_a_BCDTestForLandmarkCompare_standard.fcsv.md5
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chk_i_BCDTestForLandmarkCompare_standard.fcsv.md5
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chk_insertMidACPCpointTest_standard.fcsv.md5
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chk_landmarksConstellationAlignerTest_standard.fcsv.md5
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deformed0036195.vtk.md5
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deformedMovingImage.nii.gz.md5
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diffeomorphicDemons1.nii.gz.md5
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diffeomorphicDemons2.nii.gz.md5
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diffeomorphicDemons3.nii.gz.md5
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diffeomorphicDemons4.nii.gz.md5
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diffeomorphicDemons5.nii.gz.md5
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diffeomorphicDemonsWithMask.nii.gz.md5
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diffeomorphicDemons_AutoMask.nii.gz.md5
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fastSymmetricForcesDemons.nii.gz.md5
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fixedImage.nii.gz.md5
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fixedlk.lnd.md5
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histeq2D.png.md5
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histeq_input1.png.md5
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histeq_input2.png.md5
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iccdef_result1.nii.gz.md5
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iccdef_result2.nii.gz.md5
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image1.nii.gz.md5
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image2.nii.gz.md5
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image_in.mhd.md5
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image_in.raw.md5
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insertMidACPCpointTest_input.fcsv.md5
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labels.nii.gz.md5
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landmarksConstellationAlignerTest_input.fcsv.md5
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landmarksWeightsCompareTest_standard.wts.md5
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movingImage.nii.gz.md5
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movinglk.lnd.md5
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optdigits.test.md5
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optdigits.train.md5
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orientedImagesDemons_test.nii.gz.md5
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rho.nii.gz.md5
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rotation.geom.test.nii.gz.md5
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rotation.rescale.rigid.nii.gz.md5
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rotation.rescale.test.nii.gz.md5
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rotation.test.nii.gz.md5
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rotation.test_mask.nii.gz.md5
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rotationUShort.rescale.rigid.nii.gz.md5
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scale.test.nii.gz.md5
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scale.test_mask.nii.gz.md5
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scan1Mask1.nii.gz.md5
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scan1T1.nii.gz.md5
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scan1T2.nii.gz.md5
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scan2Mask1.nii.gz.md5
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scan2T1.nii.gz.md5
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scan2T2.nii.gz.md5
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scan3Mask1.nii.gz.md5
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scan3SG.nii.gz.md5
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scan3T1.nii.gz.md5
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scan3T2.nii.gz.md5
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scan4Mask1.nii.gz.md5
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scan4T1.nii.gz.md5
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scan4T2.nii.gz.md5
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small_ISO_T1_REP0.nii.gz.md5
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small_ISO_T2_REP0.nii.gz.md5
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smoothed.benchmark.test.nii.gz.md5
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template_t1.nii.gz.md5
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template_t1_denoised_gaussian.nii.gz.md5
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template_t2_denoised_gaussian.nii.gz.md5
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test.nii.gz.md5
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testMask.nii.gz.md5
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test_mask.nii.gz.md5
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thirionDemons.nii.gz.md5
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translation.rescale.test.nii.gz.md5
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translation.test.nii.gz.md5
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translation.test_mask.nii.gz.md5
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warped0036896Hull.vtk.md5
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