Skip to content

BRiDGEIris/digest

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

29 Commits
 
 
 
 
 
 
 
 

Repository files navigation

DiGeST :Distributed Gene/Variant Scoring Tool

DiGeST is a gene/variant scoring tool, that takes as input two populations (case/control) of SNPs, and outputs a ranking of gene/variant according to their suspected pathogeneticity. It is composed of a front-end which allows a user to browse, filter and create groups of case and control SNPs, and a back-end that performs scoring and ranking in a distributed way, using the Map/Reduce programming model. Scalable storage and computing rely on Parquet file format over HDFS, and the Spark distributed computing framework, respectively.

Documentation:

About

Distributed Gene/Variant Scoring Tool

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages