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| /* | |
| * search_globals.h | |
| * | |
| * Created on: Dec 5, 2009 | |
| * Author: Ben Langmead | |
| */ | |
| #ifndef SEARCH_GLOBALS_H_ | |
| #define SEARCH_GLOBALS_H_ | |
| #include "threading.h" | |
| // declared in ebwt_search.cpp | |
| extern bool color; | |
| extern bool colorExEnds; | |
| extern bool colorSeq; | |
| extern bool colorQual; | |
| extern int snpPhred; | |
| extern bool showSeed; | |
| extern bool quiet; | |
| extern bool gAllowMateContainment; | |
| extern bool gReportColorPrimer; | |
| extern bool noUnal; | |
| extern MUTEX_T gLock; | |
| #endif /* SEARCH_GLOBALS_H_ */ |