ParGenes report file for run ./Documentos/Output *********************** ** [REPORT] MainLogs ** *********************** ######################## # PARGENES v1.0.1 # ######################## ParGenes was called as follow: ./ParGenes/pargenes/pargenes.py -a ./Documentos/Matriz -o ./Documentos/Output -c7 -d nt -R --model GTR --autoMRE -b 200 -m --use-astral --continue --scheduler fork [0:00:00] end of MSAs initializations Calling mpi-scheduler: /home/lucaslima/ParGenes/MPIScheduler/build/mpi-scheduler --fork-scheduler 7 /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng ./Documentos/Output/parse_run/parse_command.txt ./Documentos/Output/parse_run --threads-arg --threads Logs will be redirected to ./Documentos/Output/parse_run/logs.txt Number of families: 400 Average number of taxa: 0 Max number of taxa: 0 Average number of sites: 0 Max number of sites: 0 [Error] integer division or modulo by zero Writing report file in /home/lucaslima/Documentos/Output/report.txt When reporting the issue, please always send us this file. [Report] Checkpoint 1 ######################## # PARGENES v1.0.1 # ######################## ParGenes was called as follow: ./ParGenes/pargenes/pargenes.py -a ./Documentos/Matriz -o ./Documentos/Output -c7 -d nt -R --model GTR --autoMRE -b 200 -m --use-astral --continue --scheduler fork [0:00:00] end of MSAs initializations Calling mpi-scheduler: /home/lucaslima/ParGenes/MPIScheduler/build/mpi-scheduler --fork-scheduler 7 /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng ./Documentos/Output/parse_run/parse_command.txt ./Documentos/Output/parse_run --threads-arg --threads Logs will be redirected to ./Documentos/Output/parse_run/logs_1.txt Number of families: 400 Average number of taxa: 0 Max number of taxa: 0 Average number of sites: 0 Max number of sites: 0 [Error] integer division or modulo by zero Writing report file in /home/lucaslima/Documentos/Output/report.txt When reporting the issue, please always send us this file. [Report] Checkpoint 2 ######################## # PARGENES v1.0.1 # ######################## ParGenes was called as follow: ./ParGenes/pargenes/pargenes.py -a ./Documentos/Matriz -o ./Documentos/Output -c7 -d nt -R --model GTR --autoMRE -b 200 -m --use-astral --continue --scheduler fork [0:00:02] end of MSAs initializations Calling mpi-scheduler: /home/lucaslima/ParGenes/MPIScheduler/build/mpi-scheduler --fork-scheduler 7 /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng ./Documentos/Output/parse_run/parse_command.txt ./Documentos/Output/parse_run --threads-arg --threads Logs will be redirected to ./Documentos/Output/parse_run/logs_2.txt Number of families: 400 Average number of taxa: 0 Max number of taxa: 0 Average number of sites: 0 Max number of sites: 0 [Error] integer division or modulo by zero Writing report file in /home/lucaslima/Documentos/Output/report.txt When reporting the issue, please always send us this file. ************************* ** [REPORT] parse logs ** ************************* Program started at Sat Apr 4 17:57:01 2020 MPIScheduler was called as follow: /home/lucaslima/ParGenes/MPIScheduler/build/mpi-scheduler --fork-scheduler 7 /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng ./Documentos/Output/parse_run/parse_command.txt ./Documentos/Output/parse_run --threads-arg --threads The master process runs on node lucaslima-Inspiron-5480 and on pid 4516 Remaining commands: 400 ## Started parse_204_fas on [0:0] ## Started parse_178_fas on [3:3] ## Started parse_324_fas on [1:1] ## Started parse_152_fas on [5:5] sh: 1: /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng: not found ## Started parse_320_fas on [4:4] sh: 1: /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng: not found ## Started parse_156_fas on [2:2] sh: 1: /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng: not found ## Started parse_347_fas on [6:6] sh: 1: /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng: not found sh: 1: /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng: not found sh: 1: /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng: not found sh: 1: /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng: not found End of parse_320_fas after 10ms end of run Finished running commands. Total elasped time: 0s Load balance ratio: 0.593308 Saving svg output in ./Documentos/Output/parse_run/statistics.svg total width 8 Time spent writting svg: 0s End of Multiraxml run [Report] Checkpoint 1 Program started at Sat Apr 4 18:01:05 2020 MPIScheduler was called as follow: /home/lucaslima/ParGenes/MPIScheduler/build/mpi-scheduler --fork-scheduler 7 /home/lucaslima/ParGenes/pargenes/../raxml-ng/bin/raxml-ng ./Documentos/Output/parse_run/parse_command.txt ./Documentos/Output/parse_run --threads-arg --threads checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected checkpoint detected