Create a BridgeDb Geve-Variant database from Ensembl
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README.md

BridgeDbVariantDatabase

Create a BridgeDb Gene-Variant database from Ensembl

  • Read the source file, map the transcript identifier to gene identifier, and create the input .txt file for VariantCreator
  • Specify the subset you want in the configuration file at the entry "subset"

VariantReader [Ensembl.vcf] [SNP.config]

  • Build the BridgeDb Gene-Variant database, take a .config file as input

VariantCreator [SNP.config]