GitHub is home to over 50 million developers working together. Join them to grow your own development teams, manage permissions, and collaborate on projects.
variation discovery using long range information in linked-reads
Multiple alignment Manipulator
Toolkit for automated and rapid discovery of structural variants
micro-read Fast Alignment Search Tool
Prebuilt SONIC files for different genomes.
micro-read Copy Number Variant Regions finder
GateKeeper: Fast Alignment Filter for DNA Short Read Mapping
Profile HMM-based hybrid error correction algorithm for long reads
RepeatNet: an ab initio centromeric sequence detection algorithm
dibase-read Fast Alignment Search Tool
MAGNET: Understanding and Improving the Accuracy of Genome Pre-Alignment Filtering