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A R package for annotating and filtering NGS variant data
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BioCore.Annotation.Rproj
DESCRIPTION
NAMESPACE
README.md

README.md

BioCore.Annotation

A R package for handling postprocessing of data generated by the Bio-Core team at the Princess Margaret Cancer Centre.

Installation

The R package can be installed from GitHub using the "devtools" library.

library(devtools)
install_github("bio-core/BioCore.Annotation")

Exported functions

The following functions are exported from the package.

  • create_recurrence_table
  • create_recurrence_heatmap
  • create_variant_signature_barplot
  • filter_on_depth
  • filter_on_population
  • get_annovar_files
  • get_coding_mutations
  • get_snv
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