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Bio7
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Bundled_R Last changes for Bio7 2.2 release. Jun 26, 2015
com.eco.bio7.WorldWind Changed. Dec 9, 2015
com.eco.bio7.browser.feature Updated plugins. Changed some some browser details. Nov 25, 2014
com.eco.bio7.browser
com.eco.bio7.core.feature Merged changes for the MacOSX version. Jan 30, 2015
com.eco.bio7.edit.feature Updated plugins. Changed some some browser details. Nov 25, 2014
com.eco.bio7.edit Added MacOSX changes and fixed Mac bugs. Jan 29, 2015
com.eco.bio7.floweditor.feature
com.eco.bio7.floweditor Updated plugins. Changed some some browser details. Nov 25, 2014
com.eco.bio7.javaedit.feature Updated plugins. Changed some some browser details. Nov 25, 2014
com.eco.bio7.javaedit
com.eco.bio7.libs.feature Updated plugins. Changed some some browser details. Nov 25, 2014
com.eco.bio7.libs Changed! Mar 8, 2016
com.eco.bio7.markdownedit.feature Added a simple R markdown editor to Bio7. After markdown execution the Jul 9, 2015
com.eco.bio7.markdownedit
com.eco.bio7.os.feature Updated plugins. Changed some some browser details. Nov 25, 2014
com.eco.bio7.os
com.eco.bio7.pythonedit.feature Updated plugins. Changed some some browser details. Nov 25, 2014
com.eco.bio7.pythonedit
com.eco.bio7.r.feature Last changes for Bio7 2.2 release. Jun 26, 2015
com.eco.bio7.redit.feature Updated plugins. Changed some some browser details. Nov 25, 2014
com.eco.bio7.redit Added proposals to the R-Shell view. Commands can be executed in the May 25, 2016
com.eco.bio7.themes.feature Updated plugins. Changed some some browser details. Nov 25, 2014
com.eco.bio7.themes_ Try to improve the shell on Linux and Mac with pty4j if possible. Dec 1, 2015
com.eco.bio7.util.feature Updated plugins. Changed some some browser details. Nov 25, 2014
com.eco.bio7.util
com.eco.bio7.worldwind.feature Updated plugins. Changed some some browser details. Nov 25, 2014
com.eco.bio7 Improve the code completion of the R-Shell view. Improved the profiling May 30, 2016
net.sourceforge.texlipse-feature Added texlipse to Bio7 repository. Oct 6, 2014
net.sourceforge.texlipse Improvement of the ROI and selection transfer from the ROI Manager of Dec 11, 2015
resources
README.md Update README.md Sep 17, 2015

README.md

Bio7

The application Bio7 is an integrated development environment for ecological modeling, statistical and scientific image analysis. The application itself is based on an RCP-Eclipse-Environment (Rich-Client-Platform) which offers a huge flexibility in configuration and extensibility because of its plug-in structure and the possibility of customization.

Bio7 Overview Video

Website: http://bio7.org.

YouTube Channel Bio7

Features:

  • Creation and analysis of simulation models.
  • Statistical analysis.
  • Advanced R Graphical User Interface with editor, spreadsheet, ImageJ plot device and debugging interface.
  • Spatial statistics (possibility to send values from a specialized panel to R).
  • Image Analysis (embedded ImageJ).
  • Fast transfer of image data from ImageJ to R and vice versa.
  • Fast communication between R and Java (with RServe) and the possibilty to use R methods inside Java.
  • Interpretation of Java and script creation (BeanShell, Groovy, Jython).
  • Dynamic compilation of Java.
  • Creation of methods for Java, BeanShell, Groovy, Jython and R (integrated editors for Java, R, BeanShell, Groovy, Jython).
  • Sensitivity analysis with an embedded flowchart editor in which scripts, macros and compiled code can be dragged and executed.
  • Creation of 3d OpenGL (Jogl) models.
  • Visualizations and simulations on an embedded 3d globe (World Wind Java SDK).
  • Creation of Graphical User Interfaces with the embedded JavaFX SceneBuilder.
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