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Bundled_R Last changes for Bio7 2.2 release.
com.eco.bio7.WorldWind Changed.
com.eco.bio7.browser.feature Updated plugins. Changed some some browser details.
com.eco.bio7.browser Externalized Albireo plugin. Improved HTML editor save event.
com.eco.bio7.core.feature Merged changes for the MacOSX version.
com.eco.bio7.edit.feature Updated plugins. Changed some some browser details.
com.eco.bio7.edit Added MacOSX changes and fixed Mac bugs.
com.eco.bio7.floweditor.feature Updated plugins. Changed some some browser details.
com.eco.bio7.floweditor Updated plugins. Changed some some browser details.
com.eco.bio7.javaedit.feature Updated plugins. Changed some some browser details.
com.eco.bio7.javaedit Removed markers at compile time. Can be activated in the preferences.
com.eco.bio7.libs.feature Updated plugins. Changed some some browser details.
com.eco.bio7.libs Added the fontawsome lib.
com.eco.bio7.markdownedit.feature Added a simple R markdown editor to Bio7. After markdown execution the
com.eco.bio7.markdownedit Added a simple R markdown editor to Bio7. After markdown execution the
com.eco.bio7.os.feature Updated plugins. Changed some some browser details.
com.eco.bio7.os Added a lib.
com.eco.bio7.pythonedit.feature Updated plugins. Changed some some browser details.
com.eco.bio7.pythonedit Improved the R editor scanner to recolour multiple lines of a string,
com.eco.bio7.r.feature Last changes for Bio7 2.2 release.
com.eco.bio7.redit.feature Updated plugins. Changed some some browser details.
com.eco.bio7.redit Added code completion for available self defined functions in scopes.
com.eco.bio7.themes.feature Updated plugins. Changed some some browser details.
com.eco.bio7.themes_ Try to improve the shell on Linux and Mac with pty4j if possible.
com.eco.bio7.util.feature Updated plugins. Changed some some browser details.
com.eco.bio7.util More changes.
com.eco.bio7.worldwind.feature Updated plugins. Changed some some browser details.
com.eco.bio7 Working on improved code completion in the R editor.
net.sourceforge.texlipse-feature Added texlipse to Bio7 repository.
net.sourceforge.texlipse Improvement of the ROI and selection transfer from the ROI Manager of
resources Added a Bio7 screenshot.
README.md Update README.md

README.md

Bio7

The application Bio7 is an integrated development environment for ecological modeling, statistical and scientific image analysis. The application itself is based on an RCP-Eclipse-Environment (Rich-Client-Platform) which offers a huge flexibility in configuration and extensibility because of its plug-in structure and the possibility of customization.

Bio7 Overview Video

Website: http://bio7.org.

YouTube Channel Bio7

Features:

  • Creation and analysis of simulation models.
  • Statistical analysis.
  • Advanced R Graphical User Interface with editor, spreadsheet, ImageJ plot device and debugging interface.
  • Spatial statistics (possibility to send values from a specialized panel to R).
  • Image Analysis (embedded ImageJ).
  • Fast transfer of image data from ImageJ to R and vice versa.
  • Fast communication between R and Java (with RServe) and the possibilty to use R methods inside Java.
  • Interpretation of Java and script creation (BeanShell, Groovy, Jython).
  • Dynamic compilation of Java.
  • Creation of methods for Java, BeanShell, Groovy, Jython and R (integrated editors for Java, R, BeanShell, Groovy, Jython).
  • Sensitivity analysis with an embedded flowchart editor in which scripts, macros and compiled code can be dragged and executed.
  • Creation of 3d OpenGL (Jogl) models.
  • Visualizations and simulations on an embedded 3d globe (World Wind Java SDK).
  • Creation of Graphical User Interfaces with the embedded JavaFX SceneBuilder.
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