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.github/workflows
add docker containers backup to aws too
Sep 21, 2022
abacas
Add debian package abacas/1.3.1-5-deb/Dockerfile
Aug 6, 2019
abyss
Add debian package abyss/2.1.5-7-deb/Dockerfile
Aug 6, 2019
acedb-other-belvu
Add debian package acedb-other-belvu/4.9.39dfsg.02-4-deb/Dockerfile
Aug 6, 2019
acedb-other-dotter
Add debian package acedb-other-dotter/4.9.39dfsg.02-4-deb/Dockerfile
Aug 6, 2019
acedb-other
Add debian package acedb-other/4.9.39dfsg.02-4-deb/Dockerfile
Aug 6, 2019
adapterremoval
Add debian package adapterremoval/2.2.3-1-deb/Dockerfile
Aug 6, 2019
adun-core
Add debian package adun-core/0.81-13-deb/Dockerfile
Aug 6, 2019
adun.app
Add debian package adun.app/0.81-13-deb/Dockerfile
Aug 6, 2019
aegean
Add debian package aegean/0.16.0dfsg-1-deb/Dockerfile
Aug 6, 2019
aeskulap
Add debian package aeskulap/0.2.2-beta2git20180219.8787e95-2-deb/Dock…
Aug 6, 2019
aevol
Add debian package aevol/5.0-2b1-deb/Dockerfile
Aug 6, 2019
aghermann
Add debian package aghermann/1.1.2-2-deb/Dockerfile
Aug 6, 2019
alien-hunter
add libfindbin-libs-perl to alien-hunter, error in deb package deps, C…
Oct 18, 2021
aliscore/2.0
remove CMD
May 20, 2019
alter-sequence-alignment
Add debian package alter-sequence-alignment/1.3.4-2-deb/Dockerfile
Aug 6, 2019
altree
Add debian package altree/1.3.1-7b1-deb/Dockerfile
Aug 6, 2019
amap-align
Add debian package amap-align/2.2git20080214.600fc29dfsg-1-deb/Docker…
Aug 6, 2019
amide
Add debian package amide/1.0.5-12b1-deb/Dockerfile
Aug 6, 2019
ampliconnoise
Add debian package ampliconnoise/1.29-8-deb/Dockerfile
Aug 6, 2019
andi
Add debian package andi/0.12-4-deb/Dockerfile
Aug 6, 2019
anfo
Add debian package anfo/0.98-7-deb/Dockerfile
Aug 6, 2019
aragorn
Add debian package aragorn/1.2.38-2-deb/Dockerfile
Aug 6, 2019
arden
Add debian package arden/1.0-4-deb/Dockerfile
Aug 6, 2019
ariba
Add debian package ariba/2.13.3ds-1-deb/Dockerfile
Aug 6, 2019
art-nextgen-simulation-tools-profiles
Add debian package art-nextgen-simulation-tools-profiles/20160605dfsg…
Aug 6, 2019
art-nextgen-simulation-tools
Add debian package art-nextgen-simulation-tools/20160605dfsg-3-deb/Do…
Aug 6, 2019
artemis
Add debian package artemis/17.0.1dfsg-2-deb/Dockerfile
Aug 6, 2019
artfastqgenerator
Add debian package artfastqgenerator/0.0.20150519-3-deb/Dockerfile
Aug 6, 2019
assemblytics/1.0ds-1-deb
Add debian package assemblytics/1.0ds-1-deb/Dockerfile
Aug 6, 2019
atac
Add debian package atac/020150903r2013-6-deb/Dockerfile
Aug 6, 2019
augustus-data
Add debian package augustus-data/3.3.2dfsg-2-deb/Dockerfile
Aug 6, 2019
augustus
Add debian package augustus/3.3.2dfsg-2-deb/Dockerfile
Aug 6, 2019
autoclassweb
Update AutoClassWeb to 2.2.1 (#414)
Aug 30, 2021
autodock-getdata
Add debian package autodock-getdata/4.2.6-6-deb/Dockerfile
Aug 6, 2019
autodock-test
Add debian package autodock-test/4.2.6-6-deb/Dockerfile
Aug 6, 2019
autodock-vina
Add debian package autodock-vina/1.1.2-5b1-deb/Dockerfile
Aug 6, 2019
autodock
Add debian package autodock/4.2.6-6-deb/Dockerfile
Aug 6, 2019
autogrid-test
Add debian package autogrid-test/4.2.6-6-deb/Dockerfile
Aug 6, 2019
autogrid
Add debian package autogrid/4.2.6-6-deb/Dockerfile
Aug 6, 2019
avivator/0.12.3
add avivator container (#431)
Jan 19, 2022
avro
Add debian package avro/1.8.2dfsg-2-deb-py3/Dockerfile
Aug 6, 2019
axe-demultiplexer
Add debian package axe-demultiplexer/0.3.3dfsg-1-deb/Dockerfile
Aug 6, 2019
baitfisher/1.2.7git20180107.e92dbf2dfsg-1-deb
Add debian package baitfisher/1.2.7git20180107.e92dbf2dfsg-1-deb/Dock…
Aug 6, 2019
bali-phy/3.4dfsg-1-deb
Add debian package bali-phy/3.4dfsg-1-deb/Dockerfile
Aug 6, 2019
ball
Add debian package ball/1.5.0git20180813.37fc53c-3-deb-py2/Dockerfile
Aug 6, 2019
ballview
Add debian package ballview/1.5.0git20180813.37fc53c-3-deb/Dockerfile
Aug 6, 2019
bamdst/1.0.9
Dockerfile for bamdst (#459)
Aug 11, 2022
bamtools
Add debian package bamtools/2.5.1dfsg-3-deb/Dockerfile
Aug 6, 2019
bandage/0.8.1-1-deb
Add debian package bandage/0.8.1-1-deb/Dockerfile
Aug 6, 2019
barrnap
Add debian package barrnap/0.9dfsg-1-deb/Dockerfile
Aug 6, 2019
bart-view/0.1.00-2-deb
Add debian package bart-view/0.1.00-2-deb/Dockerfile
Aug 6, 2019
bart
Add debian package bart/0.4.04-2-deb/Dockerfile
Aug 6, 2019
bcbio
Add debian package bcbio/1.1.2-3-deb/Dockerfile
Aug 6, 2019
bcftools
Add debian package bcftools/1.9-1-deb/Dockerfile
Aug 6, 2019
beads/1.1.18dfsg-3-deb
Add debian package beads/1.1.18dfsg-3-deb/Dockerfile
Aug 6, 2019
beagle
Add debian package beagle/5.0-180928dfsg-1-deb/Dockerfile
Aug 6, 2019
beast-mcmc
Add debian package beast-mcmc/1.10.4dfsg-1-deb/Dockerfile
Aug 6, 2019
beast2-mcmc
Add debian package beast2-mcmc/2.5.1dfsg-2-deb/Dockerfile
Aug 6, 2019
bedops
Add debian package bedops/2.4.35dfsg-1-deb/Dockerfile
Aug 6, 2019
bedtools-test
Add debian package bedtools-test/2.27.1dfsg-4-deb/Dockerfile
Aug 6, 2019
bedtools
Add debian package bedtools/2.27.1dfsg-4-deb/Dockerfile
Aug 6, 2019
belvu/4.44.1dfsg-3-deb
Add debian package belvu/4.44.1dfsg-3-deb/Dockerfile
Aug 6, 2019
berkeley-express
Add debian package berkeley-express/1.5.2dfsg-1b2-deb/Dockerfile
Aug 7, 2019
bio-eagle
Add debian package bio-eagle/2.4.1-1-deb/Dockerfile
Aug 7, 2019
bio-rainbow
Add debian package bio-rainbow/2.0.4dfsg-1-deb/Dockerfile
Aug 7, 2019
bio-tradis
Add debian package bio-tradis/1.4.1dfsg-1-deb/Dockerfile
Aug 7, 2019
bioconductor-affy/1.52.0-1-deb
Add debian package bioconductor-affy/1.52.0-1-deb/Dockerfile
May 31, 2018
bioconductor-affyio/1.44.0-1-deb
Add debian package bioconductor-affyio/1.44.0-1-deb/Dockerfile
May 31, 2018
bioconductor-altcdfenvs/1-2.36.0-1-deb
Add debian package bioconductor-altcdfenvs/1-2.36.0-1-deb/Dockerfile
May 31, 2018
bioconductor-annotate/1.52.1dfsg-1-deb
Add debian package bioconductor-annotate/1.52.1dfsg-1-deb/Dockerfile
May 31, 2018
bioconductor-annotationdbi/1.36.1-2-deb
Add debian package bioconductor-annotationdbi/1.36.1-2-deb/Dockerfile
May 31, 2018
bioconductor-annotationhub/2.6.4-1-deb
Add debian package bioconductor-annotationhub/2.6.4-1-deb/Dockerfile
May 31, 2018
bioconductor-aroma.light/3.4.0-1-deb
Add debian package bioconductor-aroma.light/3.4.0-1-deb/Dockerfile
May 31, 2018
bioconductor-biobase/2.34.0-1-deb
Add debian package bioconductor-biobase/2.34.0-1-deb/Dockerfile
May 31, 2018
bioconductor-biocgenerics/0.20.0-1-deb
Add debian package bioconductor-biocgenerics/0.20.0-1-deb/Dockerfile
May 31, 2018
bioconductor-biocinstaller/1.24.0-1-deb
Add debian package bioconductor-biocinstaller/1.24.0-1-deb/Dockerfile
May 31, 2018
bioconductor-biocparallel/1.8.1-1-deb
Add debian package bioconductor-biocparallel/1.8.1-1-deb/Dockerfile
May 31, 2018
bioconductor-biomart/2.30.0-1-deb
Add debian package bioconductor-biomart/2.30.0-1-deb/Dockerfile
May 31, 2018
bioconductor-biomformat/1.2.0-1-deb
Add debian package bioconductor-biomformat/1.2.0-1-deb/Dockerfile
May 31, 2018
bioconductor-biostrings/2.42.1-1-deb
Add debian package bioconductor-biostrings/2.42.1-1-deb/Dockerfile
May 31, 2018
bioconductor-biovizbase/1.22.0-2-deb
Add debian package bioconductor-biovizbase/1.22.0-2-deb/Dockerfile
May 31, 2018
bioconductor-bsgenome/1.42.0-2-deb
Add debian package bioconductor-bsgenome/1.42.0-2-deb/Dockerfile
May 31, 2018
bioconductor-cummerbund/2.16.0-2-deb
Add debian package bioconductor-cummerbund/2.16.0-2-deb/Dockerfile
May 31, 2018
bioconductor-deseq2/1.14.1-1-deb
Add debian package bioconductor-deseq2/1.14.1-1-deb/Dockerfile
May 31, 2018
bioconductor-dnacopy/1.48.0-1-deb
Add debian package bioconductor-dnacopy/1.48.0-1-deb/Dockerfile
May 31, 2018
bioconductor-ebseq/1.14.0-1-deb
Add debian package bioconductor-ebseq/1.14.0-1-deb/Dockerfile
May 31, 2018
bioconductor-edger/3.14.0dfsg-1-deb
Add debian package bioconductor-edger/3.14.0dfsg-1-deb/Dockerfile
May 31, 2018
bioconductor-ensembldb/1.6.2-1-deb
Add debian package bioconductor-ensembldb/1.6.2-1-deb/Dockerfile
May 31, 2018
bioconductor-genefilter/1.56.0-1-deb
Add debian package bioconductor-genefilter/1.56.0-1-deb/Dockerfile
May 31, 2018
bioconductor-geneplotter/1.52.0-2-deb
Add debian package bioconductor-geneplotter/1.52.0-2-deb/Dockerfile
May 31, 2018
bioconductor-genomeinfodb/1.10.3-1-deb
Add debian package bioconductor-genomeinfodb/1.10.3-1-deb/Dockerfile
May 31, 2018
bioconductor-genomicalignments/1.10.0-1b1-deb
Add debian package bioconductor-genomicalignments/1.10.0-1b1-deb/Dock…
May 31, 2018
bioconductor-genomicfeatures/1.26.2-1-deb
Add debian package bioconductor-genomicfeatures/1.26.2-1-deb/Dockerfile
May 31, 2018
bioconductor-genomicranges/1.26.2-1b1-deb
Add debian package bioconductor-genomicranges/1.26.2-1b1-deb/Dockerfile
May 31, 2018
bioconductor-go.db/3.4.0-1-deb
Add debian package bioconductor-go.db/3.4.0-1-deb/Dockerfile
May 31, 2018
bioconductor-graph/1.52.0-1-deb
Add debian package bioconductor-graph/1.52.0-1-deb/Dockerfile
May 31, 2018
bioconductor-gviz/1.18.1-1-deb
Add debian package bioconductor-gviz/1.18.1-1-deb/Dockerfile
May 31, 2018
bioconductor-hilbertvis/1.32.0-1-deb
Add debian package bioconductor-hilbertvis/1.32.0-1-deb/Dockerfile
May 31, 2018
bioconductor-hypergraph/1.46.0-1-deb
Add debian package bioconductor-hypergraph/1.46.0-1-deb/Dockerfile
May 31, 2018
bioconductor-interactivedisplaybase/1.12.0-1-deb
Add debian package bioconductor-interactivedisplaybase/1.12.0-1-deb/D…
May 31, 2018
bioconductor-iranges/2.8.1-1b1-deb
Add debian package bioconductor-iranges/2.8.1-1b1-deb/Dockerfile
May 31, 2018
bioconductor-limma/3.30.8dfsg-1-deb
Add debian package bioconductor-limma/3.30.8dfsg-1-deb/Dockerfile
May 31, 2018
bioconductor-makecdfenv/1.50.0-1-deb
Add debian package bioconductor-makecdfenv/1.50.0-1-deb/Dockerfile
May 31, 2018
bioconductor-mergeomics/1.2.0-1-deb
Add debian package bioconductor-mergeomics/1.2.0-1-deb/Dockerfile
May 31, 2018
bioconductor-metagenomeseq/1.16.0-2-deb
Add debian package bioconductor-metagenomeseq/1.16.0-2-deb/Dockerfile
May 31, 2018
bioconductor-multtest/2.30.0-1-deb
Add debian package bioconductor-multtest/2.30.0-1-deb/Dockerfile
May 31, 2018
bioconductor-phyloseq/1.19.1-2-deb
Add debian package bioconductor-phyloseq/1.19.1-2-deb/Dockerfile
May 31, 2018
bioconductor-preprocesscore/1.36.0-1-deb
Add debian package bioconductor-preprocesscore/1.36.0-1-deb/Dockerfile
May 31, 2018
bioconductor-qvalue/2.6.0-1-deb
Add debian package bioconductor-qvalue/2.6.0-1-deb/Dockerfile
May 31, 2018
bioconductor-rbgl/1.50.0dfsg1-1-deb
Add debian package bioconductor-rbgl/1.50.0dfsg1-1-deb/Dockerfile
May 31, 2018
bioconductor-rsamtools/1.26.1-2b1-deb
Add debian package bioconductor-rsamtools/1.26.1-2b1-deb/Dockerfile
May 31, 2018
bioconductor-rtracklayer/1.34.1-1-deb
Add debian package bioconductor-rtracklayer/1.34.1-1-deb/Dockerfile
May 31, 2018
bioconductor-s4vectors/0.12.1-2b1-deb
Add debian package bioconductor-s4vectors/0.12.1-2b1-deb/Dockerfile
May 31, 2018
bioconductor-savr/1.12.0-1-deb
Add debian package bioconductor-savr/1.12.0-1-deb/Dockerfile
May 31, 2018
bioconductor-shortread/1.32.0-1b1-deb
Add debian package bioconductor-shortread/1.32.0-1b1-deb/Dockerfile
May 31, 2018
bioconductor-snpstats/1.24.0dfsg-1-deb
Add debian package bioconductor-snpstats/1.24.0dfsg-1-deb/Dockerfile
May 31, 2018
bioconductor-summarizedexperiment/1.4.0-2-deb
Add debian package bioconductor-summarizedexperiment/1.4.0-2-deb/Dock…
May 31, 2018
bioconductor-variantannotation/1.20.2-1b1-deb
Add debian package bioconductor-variantannotation/1.20.2-1b1-deb/Dock…
May 31, 2018
bioconductor-xvector/0.14.0-1b1-deb
Add debian package bioconductor-xvector/0.14.0-1b1-deb/Dockerfile
May 31, 2018
biocontainers
rebuild for ca-certif and other security base updates
Mar 5, 2022
biodocker
BIODOCKER: setting old recipe up to specs
Dec 14, 2018
biom-format-tools
Add debian package biom-format-tools/2.1.7dfsg-2-deb/Dockerfile
Aug 7, 2019
biom-format
Add debian package biom-format/2.1.7dfsg-2-deb-py3/Dockerfile
Aug 7, 2019
biomaj-properties/1.2.3-11-deb
Add debian package biomaj-properties/1.2.3-11-deb/Dockerfile
May 31, 2018
biomaj/1.2.3-11-deb
Add debian package biomaj/1.2.3-11-deb/Dockerfile
May 31, 2018
biomaj3-cli/3.1.10-1-deb-py3
Add debian package biomaj3-cli/3.1.10-1-deb-py3/Dockerfile
Aug 7, 2019
biomaj3-core/3.0.15-1-deb-py3
Add debian package biomaj3-core/3.0.15-1-deb-py3/Dockerfile
Aug 7, 2019
biomaj3-daemon/3.0.17-1-deb-py3
Add debian package biomaj3-daemon/3.0.17-1-deb-py3/Dockerfile
Aug 7, 2019
biomaj3-download/3.0.19-1-deb-py3
Add debian package biomaj3-download/3.0.19-1-deb-py3/Dockerfile
Aug 7, 2019
biomaj3-process/3.0.11-1-deb-py3
Add debian package biomaj3-process/3.0.11-1-deb-py3/Dockerfile
Aug 7, 2019
biomaj3-user/3.0.6-2-deb-py3
Add debian package biomaj3-user/3.0.6-2-deb-py3/Dockerfile
Aug 7, 2019
biomaj3-zipkin/0.2.2-1-deb-py3
Add debian package biomaj3-zipkin/0.2.2-1-deb-py3/Dockerfile
Aug 7, 2019
biomaj3/3.1.6-1-deb-py3
Add debian package biomaj3/3.1.6-1-deb-py3/Dockerfile
Aug 7, 2019
bioperl-run
Add debian package bioperl-run/1.7.2-4-deb/Dockerfile
Aug 7, 2019
bioperl
Add debian package bioperl/1.7.2-3-deb/Dockerfile
Aug 7, 2019
biopython-sql
Add debian package biopython-sql/1.73dfsg-1-deb-py3/Dockerfile
Aug 7, 2019
biopython
Add debian package biopython/1.73dfsg-1-deb-py3/Dockerfile
Aug 7, 2019
bior_annotate/2.1.1
fix biotools and name
May 29, 2020
biosql
Add debian package biosql/1.73dfsg-1-deb-py2/Dockerfile
Aug 19, 2019
biosquid-dev/1.9gcvs20050121-7-deb
Add debian package biosquid-dev/1.9gcvs20050121-7-deb/Dockerfile
Apr 4, 2018
biosquid
Add debian package biosquid/1.9gcvs20050121-11-deb/Dockerfile
Aug 19, 2019
biosyntax-common/1.0.0b-1-deb
Add debian package biosyntax-common/1.0.0b-1-deb/Dockerfile
Aug 19, 2019
biosyntax-example/1.0.0b-1-deb
Add debian package biosyntax-example/1.0.0b-1-deb/Dockerfile
Aug 19, 2019
biosyntax-gedit/1.0.0b-1-deb
Add debian package biosyntax-gedit/1.0.0b-1-deb/Dockerfile
Aug 19, 2019
biosyntax-less/1.0.0b-1-deb
Add debian package biosyntax-less/1.0.0b-1-deb/Dockerfile
Aug 19, 2019
biosyntax-vim/1.0.0b-1-deb
Add debian package biosyntax-vim/1.0.0b-1-deb/Dockerfile
Aug 19, 2019
biosyntax/1.0.0b-1-deb
Add debian package biosyntax/1.0.0b-1-deb/Dockerfile
Aug 19, 2019
biotools
Add debian package biotools/1.2.12-3-deb-py3/Dockerfile
Aug 19, 2019
bitseq/0.7.5dfsg-4-deb
add debian bitseq
Aug 19, 2019
blasr
Add debian package blasr/5.3.2dfsg-1.1-deb/Dockerfile
Aug 19, 2019
blast/2.2.31
BLAST: Updated Dockerfile to use specific version of base image
Nov 21, 2018
blast2
Add debian package blast2/1-2.8.1-1-deb/Dockerfile
Aug 19, 2019
blixem/4.44.1dfsg-3-deb
Add debian package blixem/4.44.1dfsg-3-deb/Dockerfile
Aug 19, 2019
bolt-lmm-example/2.3.2dfsg-3-deb
Add debian package bolt-lmm-example/2.3.2dfsg-3-deb/Dockerfile
Aug 19, 2019
bolt-lmm/2.3.2dfsg-3b1-deb
Add debian package bolt-lmm/2.3.2dfsg-3b1-deb/Dockerfile
Aug 19, 2019
bowtie
Add debian package bowtie/1.2.2dfsg-4-deb/Dockerfile
Aug 19, 2019
bowtie2
changed label metadata
Aug 28, 2020
boxshade
Add debian package boxshade/3.3.1-12-deb/Dockerfile
Aug 19, 2019
bppphyview/0.6.1-1-deb
Add debian package bppphyview/0.6.1-1-deb/Dockerfile
Aug 19, 2019
bppsuite/2.4.1-1-deb
Add debian package bppsuite/2.4.1-1-deb/Dockerfile
Aug 19, 2019
brig
Add debian package brig/0.95dfsg-2-deb/Dockerfile
Aug 19, 2019
burrito
Add debian package burrito/0.9.1-3-deb-py3/Dockerfile
Aug 19, 2019
bwa
add bwa 0.7.17 (#373)
May 29, 2020
bwakit/0.7.15
add dockerfile for bwakit (#334)
Jun 25, 2019
bx-tools
Add debian package bx-tools/0.8.2-1-deb-py3/Dockerfile
Aug 19, 2019
bx
Add debian package bx/0.8.2-1-deb-py3/Dockerfile
Sep 9, 2019
bz2file
Add debian package bz2file/0.98-2-deb-py3/Dockerfile
Sep 9, 2019
cain-solvers
Add debian package cain-solvers/1.10dfsg-3-deb/Dockerfile
Sep 9, 2019
cain
Add debian package cain/1.10dfsg-3-deb/Dockerfile
Sep 9, 2019
camitk-actionstatemachine
Add debian package camitk-actionstatemachine/4.1.2-3-deb/Dockerfile
Sep 9, 2019
camitk-config
Add debian package camitk-config/4.1.2-3-deb/Dockerfile
Sep 9, 2019
camitk-imp
Add debian package camitk-imp/4.1.2-3-deb/Dockerfile
Sep 9, 2019
canu
Add debian package canu/1.8dfsg-2-deb/Dockerfile
Sep 9, 2019
casmoothing/0.2-1b1-deb-py2
Add debian package casmoothing/0.2-1b1-deb-py2/Dockerfile
Jun 1, 2018
cassiopee
Add debian package cassiopee/1.0.9-2-deb/Dockerfile
Sep 9, 2019
cava/1.1.1
CAVA: Updated Dockerfile to use specific version of base image
Nov 21, 2018
ccmetagen/1.1.5
add metagen, Closes #363
May 7, 2020
cct
Add debian package cct/20170919dfsg-1-deb/Dockerfile
Sep 9, 2019
cd-hit
Add debian package cd-hit/4.6.8-2-deb/Dockerfile
Sep 9, 2019
cdbfasta
Add debian package cdbfasta/0.99-20100722-5-deb/Dockerfile
Sep 9, 2019
cellpose
v2.1.1 (#486)
Nov 21, 2022
centrifuge/1.0.3-2-deb
Add debian package centrifuge/1.0.3-2-deb/Dockerfile
Sep 9, 2019
cfflib/2.0.5-3-deb-py2
Add debian package cfflib/2.0.5-3-deb-py2/Dockerfile
Sep 9, 2019
cgview
Add debian package cgview/0.0.20100111-4-deb/Dockerfile
Sep 9, 2019
chado-utils
Add debian package chado-utils/1.31-5-deb/Dockerfile
Sep 9, 2019
changeo/0.4.5-1-deb
Add debian package changeo/0.4.5-1-deb/Dockerfile
Sep 9, 2019
chimeraslayer
Add debian package chimeraslayer/20101212dfsg1-2-deb/Dockerfile
Sep 9, 2019
chromhmm-example/1.18dfsg-1-deb
Add debian package chromhmm-example/1.18dfsg-1-deb/Dockerfile
Sep 9, 2019
chromhmm/1.18dfsg-1-deb
Add debian package chromhmm/1.18dfsg-1-deb/Dockerfile
Sep 9, 2019
chromimpute/1.0.3dfsg-1-deb
Add debian package chromimpute/1.0.3dfsg-1-deb/Dockerfile
Sep 9, 2019
circlator
Add debian package circlator/1.5.5-3-deb/Dockerfile
Sep 9, 2019
circos-tools
Add debian package circos-tools/0.23-1-deb/Dockerfile
Sep 9, 2019
circos
Add debian package circos/0.69.6dfsg-2-deb/Dockerfile
Sep 9, 2019
clearcut
Add debian package clearcut/1.0.9-3-deb/Dockerfile
Sep 9, 2019
clips
Add debian package clips/1.0.7.348clips-4-deb-py2/Dockerfile
Sep 9, 2019
clonalframe
Add debian package clonalframe/1.2-9-deb/Dockerfile
Sep 9, 2019
clonalframeml/1.11-3-deb
Add debian package clonalframeml/1.11-3-deb/Dockerfile
Sep 9, 2019
clonalorigin/1.0-3-deb
Add debian package clonalorigin/1.0-3-deb/Dockerfile
Sep 9, 2019
clustal-omega/1.2.1
CLUSTAL-OMEGA: fixed version number
Dec 4, 2018
clustalo
Add debian package clustalo/1.2.4-2-deb/Dockerfile
Sep 9, 2019
clustalw
Add debian package clustalw/2.1lgpl-6-deb/Dockerfile
Sep 9, 2019
clustalx
Add debian package clustalx/2.1lgpl-8-deb/Dockerfile
Sep 9, 2019
cnvkit/0.9.5-3-deb
add debian cnvkit
Aug 19, 2019
cobra-data
Add debian package cobra-data/0.14.1-1-deb-py2/Dockerfile
Sep 9, 2019
cobra
Add debian package cobra/0.14.1-1-deb-py3/Dockerfile
Sep 9, 2019
codonw
Add debian package codonw/1.4.4-4-deb/Dockerfile
Sep 9, 2019
cogent
Add debian package cogent/1.9-14-deb-py2/Dockerfile
Sep 9, 2019
colormap
Add debian package colormap/1.0.2-1-deb-py3/Dockerfile
Sep 9, 2019
colormath/3.0.0-1-deb-py3
Add debian package colormath/3.0.0-1-deb-py3/Dockerfile
Sep 9, 2019
comet
remove CMD
May 20, 2019
concavity
Add debian package concavity/0.1dfsg.1-4-deb/Dockerfile
Sep 9, 2019
conodictor
Update conodictor to v2.3.1 (#411)
Aug 13, 2021
consensuscore2/3.3.0dfsg-2.1-deb-py2
Add debian package consensuscore2/3.3.0dfsg-2.1-deb-py2/Dockerfile
Sep 9, 2019
conservation-code
Add debian package conservation-code/20110309.0-7-deb/Dockerfile
Sep 9, 2019
control-freec/11.5
add dockerfile for control-freec (#349)
Nov 26, 2019
coregenebuilder/1.0
fix syntax error
May 20, 2019
corepywrap
Add debian package corepywrap/1.005-6-deb-py2/Dockerfile
Sep 9, 2019
cpat/1.2.4
remove CMD
May 20, 2019
crac
Add debian package crac/2.5.0dfsg-3-deb/Dockerfile
Sep 9, 2019
crux
New container version. (#307)
Feb 1, 2019
csb
Add debian package csb/1.2.5dfsg-3-deb/Dockerfile
Sep 9, 2019
ctdconverter
Add debian package ctdconverter/2.0-4-deb/Dockerfile
Sep 9, 2019
ctdopts
Add debian package ctdopts/1.2-3-deb-py3/Dockerfile
Sep 9, 2019
ctn-dev
Add debian package ctn-dev/3.2.0dfsg-6b1-deb/Dockerfile
Sep 9, 2019
ctn
Add debian package ctn/3.2.0dfsg-6b1-deb/Dockerfile
Sep 9, 2019
ctsim-help
Add debian package ctsim-help/6.0.2-2-deb/Dockerfile
Sep 9, 2019
ctsim
Add debian package ctsim/6.0.2-2-deb/Dockerfile
Sep 9, 2019
cutadapt
Add debian package cutadapt/1.18-1-deb/Dockerfile
Sep 9, 2019
cwltool
Add debian package cwltool/1.0.20181217162649dfsg-10-deb/Dockerfile
Sep 9, 2019
cycle/0.3.1-14-deb
Add debian package cycle/0.3.1-14-deb/Dockerfile
Sep 9, 2019
cyvcf2
Add debian package cyvcf2/0.10.4-1-deb-py3/Dockerfile
Sep 12, 2019
daligner
Add debian package daligner/1.0git20180524.fd21879-1-deb/Dockerfile
Sep 12, 2019
danpos/2.2.2
remove CMD
May 20, 2019
dascrubber
Add debian package dascrubber/1.1-1-deb/Dockerfile
Sep 12, 2019
dawg
Add debian package dawg/1.2-2-deb/Dockerfile
Sep 12, 2019
dazzdb
Add debian package dazzdb/1.0git20180908.0bd5e07-1-deb/Dockerfile
Sep 12, 2019
dcm2niix
Add debian package dcm2niix/1.0.20181125-1-deb/Dockerfile
Sep 12, 2019
dcmtk
Add debian package dcmtk/3.6.4-2.1-deb/Dockerfile
Sep 12, 2019
deepgoplus/1.0.0
Resolves #384 (#387)
Sep 13, 2020
deepnano-data/0.0git20170813.e8a621e-3-deb
Add debian package deepnano-data/0.0git20170813.e8a621e-3-deb/Dockerfile
Sep 12, 2019
deepnano/0.0git20170813.e8a621e-3-deb
Add debian package deepnano/0.0git20170813.e8a621e-3-deb/Dockerfile
Sep 12, 2019
delly/0.8.1-2-deb
Add debian package delly/0.8.1-2-deb/Dockerfile
Sep 12, 2019
dendropy
Add debian package dendropy/4.4.0-1-deb-py3/Dockerfile
Sep 12, 2019
denovogui
DENOVOGUI:1.5.2 Fix cmd line missing arg
Dec 12, 2018
depinfo/1.4.0-1-deb-py3
Add debian package depinfo/1.4.0-1-deb-py3/Dockerfile
Sep 12, 2019
dia-umpire
DIA_UMPIRE_2_1_2: Updated Dockerfile to use specific version of base …
Nov 22, 2018
dialign-tx-data
Add debian package dialign-tx-data/1.0.2-12-deb/Dockerfile
Sep 12, 2019
dialign-tx
Add debian package dialign-tx/1.0.2-12-deb/Dockerfile
Sep 12, 2019
dialign
Add debian package dialign/2.2.1-10-deb/Dockerfile
Sep 12, 2019
diamond-aligner
Add debian package diamond-aligner/0.9.24dfsg-1-deb/Dockerfile
Sep 12, 2019
diann
DIANN version 1.8.1 added (#440)
Apr 19, 2022
dicom3tools
Add debian package dicom3tools/1.0020180803063840-1-deb/Dockerfile
Sep 12, 2019
dicompyler
Add debian package dicompyler/0.4.2.0-2-deb/Dockerfile
Sep 12, 2019
dicomscope
Add debian package dicomscope/3.6.0-20-deb/Dockerfile
Sep 12, 2019
dictobj
fix label dictobj
Jun 1, 2018
diffexpir/0.0.1
remove CMD
May 20, 2019
dindel
Add debian package dindel/1.01-wu1-3dfsg-1b1-deb/Dockerfile
Sep 12, 2019
discosnp
Add debian package discosnp/2.3.0-2-deb/Dockerfile
Sep 12, 2019
discovar/52488
remove CMD
May 20, 2019
discovardenovo/52488
remove CMD
May 20, 2019
disulfinder-data
Add debian package disulfinder-data/1.2.11-8-deb/Dockerfile
Sep 12, 2019
disulfinder
Add debian package disulfinder/1.2.11-8-deb/Dockerfile
Sep 12, 2019
dna-jellyfish/2.2.6-1b1-deb-py3
Add debian package dna-jellyfish/2.2.6-1b1-deb-py3/Dockerfile
Jun 1, 2018
dnaclust
Add debian package dnaclust/3-6b1-deb/Dockerfile
Sep 12, 2019
dotter/4.44.1dfsg-3-deb
Add debian package dotter/4.44.1dfsg-3-deb/Dockerfile
Sep 12, 2019
dssp
Add debian package dssp/3.0.0-3b1-deb/Dockerfile
Sep 12, 2019
dwgsim
Add debian package dwgsim/0.1.12-2-deb/Dockerfile
Sep 12, 2019
e-mem/1.0.1-2-deb
Add debian package e-mem/1.0.1-2-deb/Dockerfile
Sep 12, 2019
ea-utils
Add debian package ea-utils/1.1.2dfsg-5-deb/Dockerfile
Sep 12, 2019
easydev
Add debian package easydev/0.9.37-1-deb-py3/Dockerfile
Sep 12, 2019
ebi-webservice/1.0.0
Added biotools identifier and fixed white space (#245)
Jun 29, 2018
ecopcr
Add debian package ecopcr/1.0.1dfsg-1-deb/Dockerfile
Sep 12, 2019
edfbrowser
Add debian package edfbrowser/1.67dfsg-1-deb/Dockerfile
Sep 12, 2019
edlib-aligner
Add debian package edlib-aligner/1.2.4-1-deb/Dockerfile
Sep 12, 2019
edlib/1.2.4-1-deb-py3
Add debian package edlib/1.2.4-1-deb-py3/Dockerfile
Sep 12, 2019
edtsurf
Add debian package edtsurf/0.2009-6-deb/Dockerfile
Sep 12, 2019
eido
Bump peppy version (#472)
Sep 14, 2022
eigensoft
Add debian package eigensoft/7.2.1dfsg-1-deb/Dockerfile
Sep 12, 2019
elastix
Add debian package elastix/4.9.0-1-deb/Dockerfile
Sep 12, 2019
elph/1.0.1-2-deb
Add debian package elph/1.0.1-2-deb/Dockerfile
Sep 12, 2019
embassy-domainatrix
Add debian package embassy-domainatrix/0.1.660-3-deb/Dockerfile
Sep 12, 2019
embassy-domalign
Add debian package embassy-domalign/0.1.660-3-deb/Dockerfile
Sep 12, 2019
embassy-domsearch
Add debian package embassy-domsearch/1-0.1.660-3-deb/Dockerfile
Sep 12, 2019
emboss-data
Add debian package emboss-data/6.6.0dfsg-7-deb/Dockerfile
Sep 12, 2019
emboss-explorer
Add debian package emboss-explorer/2.2.0-10-deb/Dockerfile
Sep 12, 2019
emboss-lib
Add debian package emboss-lib/6.6.0dfsg-7b1-deb/Dockerfile
Sep 12, 2019
emboss-test
Add debian package emboss-test/6.6.0dfsg-7-deb/Dockerfile
Sep 12, 2019
emboss
Add debian package emboss/6.6.0dfsg-7b1-deb/Dockerfile
Sep 12, 2019
entrez-direct/7.50.20171103
remove CMD
May 20, 2019
eosc-pilot/1.0-remastering
Adding eosc-pilot/1.0-remastering container (#289)
Oct 18, 2018
epigrass/2.4.7-1-deb
Add debian package epigrass/2.4.7-1-deb/Dockerfile
Apr 4, 2018
estscan/3.0.3-3-deb
Add debian package estscan/3.0.3-3-deb/Dockerfile
Sep 12, 2019
examl/3.0.21-2-deb
Add debian package examl/3.0.21-2-deb/Dockerfile
Sep 12, 2019
exonerate
Add debian package exonerate/2.4.0-4-deb/Dockerfile
Sep 12, 2019
falcon-ms/0.1.3
add falcon-ms, Closes #419
Oct 4, 2021
falcon/1.8.6-1.1-deb
Add debian package falcon/1.8.6-1.1-deb/Dockerfile
Apr 4, 2018
famli/1.0
FAMLI_1_0: Updated Dockerfile to use specific version of base image
Nov 28, 2018
fast5
Add debian package fast5/0.6.5-2b1-deb-py3/Dockerfile
Sep 12, 2019
fastahack
Add debian package fastahack/0.0git20160702.bbc645fdfsg-6-deb/Dockerfile
Sep 12, 2019
fastaq
Add debian package fastaq/3.17.0-2-deb/Dockerfile
Sep 12, 2019
fastcluster
Add debian package fastcluster/1.1.22-1-deb-py3/Dockerfile
Jun 1, 2018
fastdnaml
Add debian package fastdnaml/1.2.2-14-deb/Dockerfile
Sep 12, 2019
fastlink
Add debian package fastlink/4.1P-fix100dfsg-2-deb/Dockerfile
Sep 12, 2019
fastml
Add debian package fastml/3.1-4-deb/Dockerfile
Sep 12, 2019
fastp
add fastp-0.20.1 (#371)
May 29, 2020
fastqc
move fastqw to /opt/fastqc with symlink in /usr/local/bin, Closes #398
Mar 16, 2021
fastqtl
Add debian package fastqtl/2.184dfsg-6b1-deb/Dockerfile
Sep 12, 2019
fasttree
Add debian package fasttree/2.1.10-2-deb/Dockerfile
Sep 12, 2019
fastx-toolkit
Add debian package fastx-toolkit/0.0.14-6-deb/Dockerfile
Sep 12, 2019
fastxtools/0.0.14
FASTXTOOLS: Updated Dockerfile to use specific version of base image
Nov 21, 2018
ffindex
Add debian package ffindex/0.9.9.9-2-deb/Dockerfile
Sep 12, 2019
figtree
Add debian package figtree/1.4.4-3-deb/Dockerfile
Sep 12, 2019
filo/1.1.0-3b1-deb
Add debian package filo/1.1.0-3b1-deb/Dockerfile
Apr 4, 2018
fis-gtm-6.3-000a/6.3-000A-1-deb
Add debian package fis-gtm-6.3-000a/6.3-000A-1-deb/Dockerfile
Apr 4, 2018
fis-gtm-6.3-007/6.3-007-1-deb
Add debian package fis-gtm-6.3-007/6.3-007-1-deb/Dockerfile
Sep 12, 2019
fis-gtm
Add debian package fis-gtm/6.3-007-1-deb/Dockerfile
Sep 12, 2019
fitbit
Add debian package fitbit/0.3.0-4-deb-py3/Dockerfile
Sep 12, 2019
fitgcp
Add debian package fitgcp/0.0.20150429-2-deb/Dockerfile
Sep 12, 2019
flexbar
Add debian package flexbar/1-3.4.0-2-deb/Dockerfile
Sep 12, 2019
fml-asm
Add debian package fml-asm/0.1-5-deb/Dockerfile
Sep 12, 2019
frc_align/20150723
remove CMD
May 20, 2019
freebayes
Add debian package freebayes/1.2.0-2-deb/Dockerfile
Sep 12, 2019
freecontact
Add debian package freecontact/1.1-4-deb-py3/Dockerfile
Sep 12, 2019
freediams-doc-en
Add debian package freediams-doc-en/0.9.4-2-deb/Dockerfile
Sep 12, 2019
freediams-doc-fr
Add debian package freediams-doc-fr/0.9.4-2-deb/Dockerfile
Sep 12, 2019
freediams
Add debian package freediams/0.9.4-2-deb/Dockerfile
Sep 12, 2019
fsa
Add debian package fsa/1.15.9dfsg-4-deb/Dockerfile
Sep 12, 2019
fsm-lite
Add debian package fsm-lite/1.0-3-deb/Dockerfile
Sep 12, 2019
fw4spl/17.2.0-2-deb
Add debian package fw4spl/17.2.0-2-deb/Dockerfile
Sep 12, 2019
galileo-daemon
Add debian package galileo-daemon/0.5.1-6-deb/Dockerfile
Sep 12, 2019
galileo
Add debian package galileo/0.5.1-6-deb/Dockerfile
Sep 12, 2019
gapcloser/1.12-r6
remove CMD
May 20, 2019
garli-mpi/2.1-3-deb
Add debian package garli-mpi/2.1-3-deb/Dockerfile
Sep 12, 2019
garli
Add debian package garli/2.1-3-deb/Dockerfile
Sep 12, 2019
gasic
Add debian package gasic/0.0.r19-4-deb/Dockerfile
Sep 12, 2019
gatb-core-testdata/1.4.1git20181225.44d5a44dfsg-3-deb
Add debian package gatb-core-testdata/1.4.1git20181225.44d5a44dfsg-3-…
Sep 12, 2019
gatb-core/1.4.1git20181225.44d5a44dfsg-3-deb
Add debian package gatb-core/1.4.1git20181225.44d5a44dfsg-3-deb/Docke…
Sep 12, 2019
gatk/3.4
fix FROM
May 20, 2019
gbrowse-calign
Add debian package gbrowse-calign/2.56dfsg-4b1-deb/Dockerfile
Sep 12, 2019
gbrowse-data
Add debian package gbrowse-data/2.56dfsg-4-deb/Dockerfile
Sep 12, 2019
gbrowse
Add debian package gbrowse/2.56dfsg-4-deb/Dockerfile
Sep 12, 2019
gcta/1.24.7
remove CMD
May 20, 2019
gdcm
Add debian package gdcm/2.8.8-9-deb-py3/Dockerfile
Sep 12, 2019
gdpc
Add debian package gdpc/2.2.5-9-deb/Dockerfile
Sep 12, 2019
gemma/0.98.1dfsg-1-deb
Add debian package gemma/0.98.1dfsg-1-deb/Dockerfile
Sep 12, 2019
geneocr-api/1.0
Including GeneOCR API (#451)
Jun 27, 2022
geneocr-ui/1.0
Including GeneOCR UI (#450)
Jun 27, 2022
genometester/4.0git20180508.a9c14a6dfsg-1-deb
Add debian package genometester/4.0git20180508.a9c14a6dfsg-1-deb/Dock…
Sep 12, 2019
genometools-common
Add debian package genometools-common/1.5.10ds-3-deb/Dockerfile
Sep 12, 2019
genometools
Add debian package genometools/1.5.10ds-3-deb/Dockerfile
Sep 25, 2019
gentle
Add debian package gentle/1.9cvs20100605dfsg1-7b1-deb/Dockerfile
Sep 25, 2019
getdata/0.2-3-deb
Add debian package getdata/0.2-3-deb/Dockerfile
Sep 25, 2019
gfapy/1.0.0dfsg-3-deb-py3
Add debian package gfapy/1.0.0dfsg-3-deb-py3/Dockerfile
Sep 25, 2019
gff2aplot
Add debian package gff2aplot/2.0-11-deb/Dockerfile
Sep 25, 2019
gff2ps
Add debian package gff2ps/0.98l-2-deb/Dockerfile
Sep 25, 2019
gffutils/0.9-1-deb-py3
Add debian package gffutils/0.9-1-deb-py3/Dockerfile
Sep 25, 2019
ghmm/0.9rc3-2-deb
Add debian package ghmm/0.9rc3-2-deb/Dockerfile
Sep 25, 2019
giira
Add debian package giira/0.0.20140625-2-deb/Dockerfile
Sep 25, 2019
ginkgocadx
Add debian package ginkgocadx/3.8.8-1-deb/Dockerfile
Sep 25, 2019
glam2
Add debian package glam2/1064-5-deb/Dockerfile
Sep 25, 2019
gnumed-client-de
Add debian package gnumed-client-de/1.7.5dfsg-3-deb/Dockerfile
Sep 25, 2019
gnumed-client
Add debian package gnumed-client/1.7.5dfsg-3-deb/Dockerfile
Sep 25, 2019
gnumed-common
Add debian package gnumed-common/1.7.5dfsg-3-deb/Dockerfile
Sep 25, 2019
gnumed-server
Add debian package gnumed-server/22.5-1-deb/Dockerfile
Sep 25, 2019
golang-github-dataence-porter2-dev/0.0git20150829.56e4718-2-deb
Add debian package golang-github-dataence-porter2-dev/0.0git20150829.…
Sep 25, 2019
grabix/0.1.7-1-deb
Add debian package grabix/0.1.7-1-deb/Dockerfile
Sep 25, 2019
graphlan
Add debian package graphlan/1.1.3-1-deb/Dockerfile
Sep 25, 2019
grinder
Add debian package grinder/0.5.4-5-deb/Dockerfile
Sep 25, 2019
gubbins
Add debian package gubbins/2.3.4-1-deb/Dockerfile
Sep 25, 2019
guidance2/2.02
Added Guidance2 to containers (#242)
Jun 29, 2018
gwama
Add debian package gwama/2.2.2dfsg-2-deb/Dockerfile
Sep 27, 2019
gwas-fasp/v1.0.0
add GA4GH FASP GWAS demo workflow container specs (#388)
Sep 23, 2020
gwyddion-common
Add debian package gwyddion-common/2.52-1-deb/Dockerfile
Sep 27, 2019
gwyddion-plugins
Add debian package gwyddion-plugins/2.52-1-deb/Dockerfile
Sep 27, 2019
gwyddion
Add debian package gwyddion/2.52-1-deb/Dockerfile
Sep 27, 2019
hap-ibd/1.0.rev20May22.818
hap-ibd dockerfile added (#468)
Sep 12, 2022
harvest-tools
Add debian package harvest-tools/1.3-4-deb/Dockerfile
Sep 27, 2019
hdmedians/0.13git20171027.8e0e9e3-1-deb-py3
Add debian package hdmedians/0.13git20171027.8e0e9e3-1-deb-py3/Docker…
Sep 27, 2019
hhsuite-data
Add debian package hhsuite-data/3.0beta3dfsg-3-deb/Dockerfile
Sep 27, 2019
hhsuite
Add debian package hhsuite/3.0beta3dfsg-3-deb/Dockerfile
Sep 27, 2019
hilive
Add debian package hilive/1.1-2-deb/Dockerfile
Sep 27, 2019
hinge/0.5.0-4-deb
Add debian package hinge/0.5.0-4-deb/Dockerfile
Sep 27, 2019
hisat2
Add debian package hisat2/2.1.0-2-deb/Dockerfile
Sep 27, 2019
hl7
Add debian package hl7/0.3.4-3-deb-py3/Dockerfile
Sep 27, 2019
hmmer
Add debian package hmmer/3.2.1dfsg-1-deb/Dockerfile
Sep 27, 2019
hmmer2-pvm
Add debian package hmmer2-pvm/2.3.2dfsg-6-deb/Dockerfile
Sep 27, 2019
hmmer2
Add debian package hmmer2/2.3.2dfsg-6-deb/Dockerfile
Sep 27, 2019
htseq
Add debian package htseq/0.11.2-1-deb-py3/Dockerfile
Sep 27, 2019
htslib-test
Add debian package htslib-test/1.9-11-deb/Dockerfile
Sep 27, 2019
htslib/1.2.1
remove CMD
May 20, 2019
hunspell-de-med/20160103-3-deb
Add debian package hunspell-de-med/20160103-3-deb/Dockerfile
Sep 27, 2019
hunspell-en-med
Add debian package hunspell-en-med/0.0.20140410-1-deb/Dockerfile
Oct 3, 2019
hyphy-common
Add debian package hyphy-common/2.3.14dfsg-1-deb/Dockerfile
Oct 3, 2019
hyphy-mpi
Add debian package hyphy-mpi/2.3.14dfsg-1-deb/Dockerfile
Oct 3, 2019
hyphy-pt
Add debian package hyphy-pt/2.3.14dfsg-1-deb/Dockerfile
Oct 3, 2019
hyphygui/2.2.7dfsg-1b2-deb
Add debian package hyphygui/2.2.7dfsg-1b2-deb/Dockerfile
Apr 4, 2018
idba
Add debian package idba/1.1.3-3-deb/Dockerfile
Oct 3, 2019
igor/1.3.0dfsg-1-deb
Add debian package igor/1.3.0dfsg-1-deb/Dockerfile
Oct 3, 2019
imagej
Add debian package imagej/1.52j-1-deb/Dockerfile
Oct 3, 2019
imagevis3d
Add debian package imagevis3d/3.1.0-7b2-deb/Dockerfile
Oct 3, 2019
imputeme
Version bump (important to have in preparation for NF-CORE integratio…
Nov 3, 2021
indelible
Add debian package indelible/1.03-4-deb/Dockerfile
Oct 3, 2019
infernal
Add debian package infernal/1.1.2-2-deb/Dockerfile
Oct 3, 2019
insighttoolkit4-python
Add debian package insighttoolkit4-python/4.12.2-dfsg1-4b1-deb/Docker…
Oct 3, 2019
integron-finder/1.5.1
remove entrypoint
May 20, 2019
interproscan/5.30-69.0
remove CMD
May 20, 2019
intervaltree-bio
Add debian package intervaltree-bio/1.0.1-3-deb-py3/Dockerfile
Oct 3, 2019
invesalius-bin
Add debian package invesalius-bin/3.1.99992-3-deb/Dockerfile
Oct 3, 2019
invesalius
Add debian package invesalius/3.1.99992-3-deb/Dockerfile
Oct 3, 2019
ipig
Add debian package ipig/0.0.r5-3-deb/Dockerfile
Oct 3, 2019
ipo
only two containers from phenomenal following the guidelines (#212)
Mar 28, 2018
iqtree
Add debian package iqtree/1.6.9dfsg-1-deb/Dockerfile
Oct 3, 2019
isatab-create
New container istab-create has been added (#213)
Mar 29, 2018
isee-galaxy/3.13
Add isee-galaxy container for Galaxy interactive tool (#417)
Sep 27, 2021
ismrmrd-schema
Add debian package ismrmrd-schema/1.4.0-1-deb/Dockerfile
Oct 3, 2019
ismrmrd-tools
Add debian package ismrmrd-tools/1.4.0-1-deb/Dockerfile
Oct 3, 2019
iva
Add debian package iva/1.0.9ds-6-deb/Dockerfile
Oct 3, 2019
jaligner
Add debian package jaligner/1.0dfsg-6-deb/Dockerfile
Oct 4, 2019
jbrowse/1.11.6
Updated Dockerfile to use specific version of base image
Nov 28, 2018
jellyfish
Add debian package jellyfish/2.2.10-2-deb/Dockerfile
Oct 4, 2019
jellyfish1
Add debian package jellyfish1/1.1.11-4-deb/Dockerfile
Oct 4, 2019
jemboss
Add debian package jemboss/6.6.0dfsg-7-deb/Dockerfile
Oct 4, 2019
jmodeltest
Add debian package jmodeltest/2.1.10dfsg-7-deb/Dockerfile
Oct 4, 2019
kalign
Add debian package kalign/1-2.0320110620-5-deb/Dockerfile
Oct 4, 2019
kast
Added 1.0.1 docker file for KAST (#453)
Jul 1, 2022
khmer-common
Add debian package khmer-common/2.1.2dfsg-6-deb/Dockerfile
Oct 4, 2019
khmer
Add debian package khmer/2.1.2dfsg-6-deb/Dockerfile
Oct 4, 2019
kineticstools-data
Add debian package kineticstools-data/0.6.1git20180425.27a1878-2-deb/…
Oct 4, 2019
kineticstools
Add debian package kineticstools/0.6.1git20180425.27a1878-2-deb/Docke…
Oct 4, 2019
king-probe
Add debian package king-probe/2.16.160404git20180613.a09b012-1-deb/Do…
Oct 4, 2019
king
Add debian package king/2.23.161103dfsg1-3-deb/Dockerfile
Oct 4, 2019
kissplice
Add debian package kissplice/2.4.0-p1-4-deb/Dockerfile
Oct 4, 2019
kmc
Add debian package kmc/2.3dfsg-7-deb/Dockerfile
Oct 4, 2019
kmer
Add debian package kmer/020150903r2013-6-deb/Dockerfile
Oct 4, 2019
kraken
Add debian package kraken/1.1-3-deb/Dockerfile
Oct 4, 2019
krona/2.7.1
Create container for Krona which includes curl. (#355)
Jan 31, 2020
lagan
Add debian package lagan/2.0-3-deb/Dockerfile
Oct 4, 2019
lamarc/2.1.10.1dfsg-3-deb
Add debian package lamarc/2.1.10.1dfsg-3-deb/Dockerfile
Oct 4, 2019
lambda-align
Add debian package lambda-align/1.0.3-5-deb/Dockerfile
Oct 4, 2019
lambda-align2/2.0.0-6-deb
Add debian package lambda-align2/2.0.0-6-deb/Dockerfile
Oct 7, 2019
last-align
Add debian package last-align/963-2-deb/Dockerfile
Oct 7, 2019
leaff
Add debian package leaff/020150903r2013-6-deb/Dockerfile
Oct 7, 2019
lefse
Add debian package lefse/1.0.8-2-deb/Dockerfile
Oct 7, 2019
logol-bin
Add debian package logol-bin/1.7.9-1-deb/Dockerfile
Oct 7, 2019
logol
Add debian package logol/1.7.9-1-deb/Dockerfile
Oct 7, 2019
loki
Add debian package loki/2.4.7.4-8-deb/Dockerfile
Oct 7, 2019
ltrsift
Add debian package ltrsift/1.0.2-8-deb/Dockerfile
Oct 7, 2019
lucy/1.20-1-deb
Add debian package lucy/1.20-1-deb/Dockerfile
Oct 7, 2019
lzstring/1.0.4-1-deb-py3
Add debian package lzstring/1.0.4-1-deb-py3/Dockerfile
Oct 7, 2019
mace/1.2
Create Dockerfile (#473)
Sep 15, 2022
macs
Add debian package macs/2.1.2.1-1-deb/Dockerfile
Oct 7, 2019
macsyfinder
Add debian package macsyfinder/1.0.5-2-deb/Dockerfile
Oct 7, 2019
maffilter
Add debian package maffilter/1.3.1dfsg-1b1-deb/Dockerfile
Oct 7, 2019
mafft
Add debian package mafft/7.407-2-deb/Dockerfile
Oct 7, 2019
magicblast/1.3.0
remove CMD
May 20, 2019
mapdamage
Add debian package mapdamage/2.0.9dfsg-1-deb/Dockerfile
Oct 7, 2019
mapsembler2
Add debian package mapsembler2/2.2.4dfsg-3b1-deb/Dockerfile
Oct 7, 2019
maq
Add debian package maq/0.7.1-8-deb/Dockerfile
Oct 7, 2019
maqview
Add debian package maqview/0.2.5-9-deb/Dockerfile
Oct 7, 2019
maracluster
maracluster 1.04.1 (#488)
Nov 21, 2022
mash
Add debian package mash/2.1dfsg-2-deb/Dockerfile
Oct 7, 2019
matplotlib-venn
Add debian package matplotlib-venn/0.11.5-5-deb-py3/Dockerfile
Oct 7, 2019
maude
Add debian package maude/2.7-2b2-deb/Dockerfile
Oct 7, 2019
mauve-aligner
Add debian package mauve-aligner/2.4.04736-1-deb/Dockerfile
Oct 7, 2019
mcl
Add debian package mcl/1-14-137ds-3-deb/Dockerfile
Oct 7, 2019
medcon
Add debian package medcon/0.16.1dfsg-1-deb/Dockerfile
Oct 7, 2019
melting-gui/4.3.1dfsg-2-deb
fix biotools id
Apr 4, 2018
melting
Add debian package melting/5.2.0-1-deb/Dockerfile
Oct 7, 2019
mencal
Add debian package mencal/3.0-4-deb/Dockerfile
Oct 7, 2019
meryl
Add debian package meryl/020150903r2013-6-deb/Dockerfile
Oct 7, 2019
metaphlan2-data
Add debian package metaphlan2-data/2.6.0ds-4-deb/Dockerfile
Oct 7, 2019
metaphlan2
Add debian package metaphlan2/2.7.8-1-deb/Dockerfile
Oct 7, 2019
metastudent-data-2
Add debian package metastudent-data-2/1.0.0-4-deb/Dockerfile
Oct 7, 2019
metastudent-data
Add debian package metastudent-data/2.0.1-4-deb/Dockerfile
Oct 7, 2019
metastudent
Add debian package metastudent/2.0.1-6-deb/Dockerfile
Oct 7, 2019
metfrag-cli-batch
only two containers from phenomenal following the guidelines (#212)
Mar 28, 2018
mhap
Add debian package mhap/2.1.3dfsg-2-deb/Dockerfile
Oct 7, 2019
mia-doctools
Add debian package mia-doctools/2.4.6-4-deb/Dockerfile
Oct 7, 2019
mia-tools
Add debian package mia-tools/2.4.6-4-deb/Dockerfile
Oct 7, 2019
mia-viewit
Add debian package mia-viewit/1.0.5-2-deb/Dockerfile
Oct 7, 2019
mia
Add debian package mia/0.1.9-2b1-deb-py3/Dockerfile
Oct 7, 2019
mialmpick
Add debian package mialmpick/0.2.14-2-deb/Dockerfile
Oct 7, 2019
microbegps
Add debian package microbegps/1.0.0-3-deb/Dockerfile
Oct 15, 2019
microbiomeutil-data
Add debian package microbiomeutil-data/20101212dfsg1-2-deb/Dockerfile
Oct 15, 2019
microbiomeutil
Add debian package microbiomeutil/20101212dfsg1-2-deb/Dockerfile
Oct 15, 2019
minc-tools
Add debian package minc-tools/2.3.00dfsg-3b1-deb/Dockerfile
Oct 15, 2019
mindthegap/2.0.1
[New tool] mindthegap (gatb package) (#249)
Jul 3, 2018
minia
Add debian package minia/1.6906-2-deb/Dockerfile
Oct 15, 2019
miniasm
Add debian package miniasm/0.3dfsg-1-deb/Dockerfile
Oct 15, 2019
minimac4/1.0.0-2-deb
Add debian package minimac4/1.0.0-2-deb/Dockerfile
Oct 15, 2019
minimap
Add debian package minimap/0.2-4-deb/Dockerfile
Oct 15, 2019
minimap2
Add debian package minimap2/2.15dfsg-1-deb/Dockerfile
Oct 15, 2019
mipe
Add debian package mipe/1.1-7-deb/Dockerfile
Oct 15, 2019
mira-assembler
Add debian package mira-assembler/4.9.6-4b1-deb/Dockerfile
Oct 15, 2019
mira-rfam-12s-rrna
Add debian package mira-rfam-12s-rrna/4.9.6-4-deb/Dockerfile
Oct 15, 2019
mitohifi/2.2
Initial implementation MitoHiFi docker container (#443)
May 3, 2022
mlv-smile
Add debian package mlv-smile/1.47-6-deb/Dockerfile
Oct 15, 2019
mne
Add debian package mne/0.17dfsg-1-deb-py2/Dockerfile
Oct 15, 2019
mobyle-programs
Add debian package mobyle-programs/5.1.2-3-deb/Dockerfile
Oct 15, 2019
mobyle-tutorials
Add debian package mobyle-tutorials/1.5.0-4-deb/Dockerfile
Oct 15, 2019
mobyle-utils
Add debian package mobyle-utils/1.5.5dfsg-6-deb/Dockerfile
Oct 15, 2019
mobyle
Add debian package mobyle/1.5.5dfsg-6-deb/Dockerfile
Oct 15, 2019
mothur-mpi/1.38.1.1-1-deb
Add debian package mothur-mpi/1.38.1.1-1-deb/Dockerfile
Jun 1, 2018
mothur
Add debian package mothur/1.41.21-1-deb/Dockerfile
Oct 15, 2019
mptp/0.2.4-1-deb
Add debian package mptp/0.2.4-1-deb/Dockerfile
Oct 15, 2019
mrbayes-mpi
Add debian package mrbayes-mpi/3.2.6dfsg-2b1-deb/Dockerfile
Oct 18, 2019
mrbayes
Add debian package mrbayes/3.2.6dfsg-2b1-deb/Dockerfile
Oct 18, 2019
mriconvert
Add debian package mriconvert/1-2.1.0-3-deb/Dockerfile
Oct 18, 2019
mrs
Add debian package mrs/6.0.5dfsg-7b2-deb/Dockerfile
Oct 18, 2019
msamanda/1.0.0.5242
MSAMANDA: the bin created using echo was missing an argument
Dec 11, 2018
msgfp/9949
MSGFPlus: updated recipe so the RUN instruction creating the bin does…
Dec 5, 2018
msisensor2/0.1
Add msisensor2 container (#462)
Aug 24, 2022
multipletau
Add debian package multipletau/0.3.3ds-1-deb-py3/Dockerfile
Oct 18, 2019
mummer
Add debian package mummer/3.23dfsg-4-deb/Dockerfile
Oct 18, 2019
murasaki-common
Add debian package murasaki-common/1.68.6-8-deb/Dockerfile
Oct 18, 2019
murasaki-mpi
Add debian package murasaki-mpi/1.68.6-8b1-deb/Dockerfile
Oct 18, 2019
murasaki
Add debian package murasaki/1.68.6-8b1-deb/Dockerfile
Oct 18, 2019
muscle
Add debian package muscle/1-3.8.1551-2-deb/Dockerfile
Oct 18, 2019
mustang-testdata
Add debian package mustang-testdata/3.2.3-3-deb/Dockerfile
Oct 18, 2019
mustang
Add debian package mustang/3.2.3-3-deb/Dockerfile
Oct 18, 2019
mypy-extensions/0.4.1-1-deb-py3
Add debian package mypy-extensions/0.4.1-1-deb-py3/Dockerfile
Oct 18, 2019
mypy
Add debian package mypy/0.670-2-deb/Dockerfile
Oct 18, 2019
nanook
Add debian package nanook/1.33dfsg-1-deb/Dockerfile
Oct 18, 2019
nanopolish
Add debian package nanopolish/0.11.0-2-deb/Dockerfile
Oct 18, 2019
nanosv/1.2.4
Adding a working container for NanoSV (#397)
Feb 21, 2021
nast-ier
Add debian package nast-ier/20101212dfsg1-2-deb/Dockerfile
Oct 18, 2019
ncbi-blast-plus-legacy
Add debian package ncbi-blast-plus-legacy/2.8.1-1-deb/Dockerfile
Oct 18, 2019
ncbi-blast-plus
Add debian package ncbi-blast-plus/2.8.1-1-deb/Dockerfile
Oct 18, 2019
ncbi-data
Add debian package ncbi-data/6.1.20170106-6-deb/Dockerfile
Oct 18, 2019
ncbi-datasets-cli/14.2.2
Container for NCBI datasets CLI (#484)
Nov 10, 2022
ncbi-entrez-direct
Add debian package ncbi-entrez-direct/10.9.20190219ds-1b10-deb/Docker…
Oct 18, 2019
ncbi-epcr
Add debian package ncbi-epcr/2.3.12-1-7-deb/Dockerfile
Oct 18, 2019
ncbi-rrna-data
Add debian package ncbi-rrna-data/6.1.20170106-6-deb/Dockerfile
Oct 18, 2019
ncbi-seg
Add debian package ncbi-seg/0.0.20000620-5-deb/Dockerfile
Oct 18, 2019
ncbi-tools-bin
Add debian package ncbi-tools-bin/6.1.20170106-6-deb/Dockerfile
Oct 18, 2019
ncbi-tools-x11
Add debian package ncbi-tools-x11/6.1.20170106-6-deb/Dockerfile
Oct 18, 2019
ncl-tools
Add debian package ncl-tools/2.1.21git20180827.c71b264-2-deb/Dockerfile
Oct 18, 2019
ncoils
Add debian package ncoils/2002-7-deb/Dockerfile
Oct 18, 2019
neobio
Add debian package neobio/0.0.20030929-4-deb/Dockerfile
Oct 18, 2019
ngs
Add debian package ngs/2.9.3-1-deb-py3/Dockerfile
Oct 18, 2019
njplot
Add debian package njplot/2.4-8-deb/Dockerfile
Oct 18, 2019
norsnet
Add debian package norsnet/1.0.17-4-deb/Dockerfile
Oct 18, 2019
norsp
Add debian package norsp/1.0.6-4-deb/Dockerfile
Oct 18, 2019
novor/1b
NOVOR_1b: Fixed cmd line missing arg
Dec 11, 2018
nutsqlite
Add debian package nutsqlite/2.0.6-1-deb/Dockerfile
Oct 18, 2019
obitools/1.2.12dfsg-2-deb
Add debian package obitools/1.2.12dfsg-2-deb/Dockerfile
Oct 18, 2019
octave-bart
Add debian package octave-bart/0.4.04-2-deb/Dockerfile
Oct 18, 2019
odil
Add debian package odil/0.10.0-3-deb/Dockerfile
Oct 18, 2019
oncocnv/v7.0
fix: script permission fix (#487)
Nov 21, 2022
openbugs/3.2.3
add openbugs container (#489)
Dec 6, 2022
opencfu
Add debian package opencfu/3.9.0-3-deb/Dockerfile
Oct 18, 2019
openmolar/1.0.15-gd81f9e5-1-deb
Add debian package openmolar/1.0.15-gd81f9e5-1-deb/Dockerfile
Apr 4, 2018
openms
OPENMS_1_11_1-3: using a legacy ubuntu release (trusty) as library ve…
Nov 28, 2018
openslide-tools
Add debian package openslide-tools/3.4.1dfsg-4-deb/Dockerfile
Oct 18, 2019
openslide
Add debian package openslide/1.1.1-4-deb-py3/Dockerfile
Oct 18, 2019
orthanc-dev
Add debian package orthanc-dev/1.5.6dfsg-1-deb/Dockerfile
Oct 18, 2019
orthanc-dicomweb
Add debian package orthanc-dicomweb/0.6dfsg-1-deb/Dockerfile
Oct 18, 2019
orthanc-imagej
Add debian package orthanc-imagej/1.2dfsg-1-deb/Dockerfile
Oct 18, 2019
orthanc-mysql/2.0-2-deb
Add debian package orthanc-mysql/2.0-2-deb/Dockerfile
Oct 18, 2019
orthanc-postgresql
Add debian package orthanc-postgresql/3.2-1-deb/Dockerfile
Oct 18, 2019
orthanc-webviewer
Add debian package orthanc-webviewer/2.5-1-deb/Dockerfile
Oct 18, 2019
orthanc-wsi/0.6-2-deb
Add debian package orthanc-wsi/0.6-2-deb/Dockerfile
Oct 18, 2019
orthanc
Add debian package orthanc/1.5.6dfsg-1-deb/Dockerfile
Oct 18, 2019
otf-symbols-circos/0.69.4dfsg-1-deb
Add debian package otf-symbols-circos/0.69.4dfsg-1-deb/Dockerfile
Jun 1, 2018
pal2nal/14.1-2-deb
Add debian package pal2nal/14.1-2-deb/Dockerfile
Oct 18, 2019
paleomix/1.2.13.3-1-deb
Add debian package paleomix/1.2.13.3-1-deb/Dockerfile
Oct 18, 2019
paml/4.9hdfsg-1-deb
Add debian package paml/4.9hdfsg-1-deb/Dockerfile
Oct 18, 2019
paraclu
Add debian package paraclu/9-2-deb/Dockerfile
Oct 18, 2019
parafly
Add debian package parafly/0.0.2013.01.21-4-deb/Dockerfile
Oct 18, 2019
parsinsert-testdata/1.04-4-deb
Add debian package parsinsert-testdata/1.04-4-deb/Dockerfile
Oct 18, 2019
parsinsert
Add debian package parsinsert/1.04-4-deb/Dockerfile
Oct 18, 2019
parsnp
Add debian package parsnp/1.2dfsg-5-deb/Dockerfile
Oct 18, 2019
partitionfinder2/2.1.1
remove CMD
May 20, 2019
patchwork
Add Dockerfile for newest Patchwork version 0.5.0 (#465)
Sep 2, 2022
patman/1.2.2dfsg-5-deb
Add debian package patman/1.2.2dfsg-5-deb/Dockerfile
Oct 18, 2019
pbalign
Add debian package pbalign/0.3.2-1-deb/Dockerfile
Oct 18, 2019
pbbamtools
Add debian package pbbamtools/0.19.0dfsg-4-deb/Dockerfile
Oct 18, 2019
pbbanana
Add debian package pbbanana/15.8.24dfsg-3-deb-py2/Dockerfile
Oct 18, 2019
pbbarcode
Add debian package pbbarcode/0.8.0-5-deb/Dockerfile
Oct 18, 2019
pbcommand
Add debian package pbcommand/1.1.1-1-deb-py2/Dockerfile
Oct 18, 2019
pbconsensuscore
Add debian package pbconsensuscore/1.1.1dfsg-1-deb-py3/Dockerfile
Oct 18, 2019
pbcore
Add debian package pbcore/1.6.5dfsg-1-deb-py2/Dockerfile
Oct 18, 2019
pbdagcon
Add debian package pbdagcon/0.3git20161121.0000000ds-1.1-deb/Dockerfile
Oct 18, 2019
pbgenomicconsensus
Add debian package pbgenomicconsensus/2.3.2-5-deb/Dockerfile
Oct 18, 2019
pbh5tools
Add debian package pbh5tools/0.8.0git20170929.58d54ffdfsg-1-deb/Docke…
Oct 18, 2019
pbhoney
Add debian package pbhoney/15.8.24dfsg-3-deb/Dockerfile
Oct 18, 2019
pbjelly
Add debian package pbjelly/15.8.24dfsg-3-deb/Dockerfile
Oct 18, 2019
pbsim
Add debian package pbsim/1.0.3git20180330.e014b1ddfsg-1-deb/Dockerfile
Oct 18, 2019
pbsuite-utils
Add debian package pbsuite-utils/15.8.24dfsg-3-deb-py2/Dockerfile
Oct 18, 2019
pbsuite
Add debian package pbsuite/15.8.24dfsg-3-deb/Dockerfile
Oct 18, 2019
pcalendar
Add debian package pcalendar/3.4.1-3-deb/Dockerfile
Oct 18, 2019
pdb2pqr
Add debian package pdb2pqr/2.1.1dfsg-5-deb/Dockerfile
Oct 18, 2019
pepnovo/20120423
PEPNOVO: Updated Dockerfile to use specific version of base image
Nov 28, 2018
peptideprophet/201510131012
remove CMD
May 20, 2019
peptideshaker
PEPTIDESHAKER:1.10.3 Fixed missing variable in cmd line
Dec 12, 2018
peptimapper/2.0.0
[New Tool] Peptimapper (from BioShaDock) (#251)
Jul 4, 2018
percolator/3.0
PERCOLATOR: Updated Dockerfile to use specific version of base image
Nov 21, 2018
perlprimer
Add debian package perlprimer/1.2.4-1-deb/Dockerfile
Oct 18, 2019
perm
Add debian package perm/0.4.0-4-deb/Dockerfile
Oct 18, 2019
pftools
Add debian package pftools/3dfsg-3-deb/Dockerfile
Oct 18, 2019
phast/1.4dfsg-1-deb
add debian phast
Aug 19, 2019
philosopher/2.0.0
Philosopher added to BioContainers (#350)
Nov 29, 2019
phipack
Add debian package phipack/0.0.20160614-3-deb/Dockerfile
Oct 18, 2019
phybin
Add debian package phybin/0.3-3-deb/Dockerfile
Oct 18, 2019
phylip
Add debian package phylip/1-3.697dfsg-1-deb/Dockerfile
Oct 18, 2019
phylocsf/latest
[New Tool from BioShadock] PhyloCSF (#260)
Aug 16, 2018
phylotools/0.2.4
add R phylotools container (not size optimized, should remove build d…
Feb 23, 2022
phyml
Add debian package phyml/3-3.3.20180621-2-deb/Dockerfile
Oct 18, 2019
physamp
Add debian package physamp/1.1.0-1-deb/Dockerfile
Oct 18, 2019
phyutility
Add debian package phyutility/2.7.3dfsg-2-deb/Dockerfile
Oct 18, 2019
phyx/0.999ds-1-deb
Add debian package phyx/0.999ds-1-deb/Dockerfile
Oct 18, 2019
pia-web-server/1.1.0-SNAPSHOT
PIA-WEB-SERVER: Updated Dockerfile to use specific version of base image
Nov 21, 2018
pia
remove entrypoint
May 20, 2019
picard-tools
Add debian package picard-tools/2.18.25dfsg-2-deb/Dockerfile
Oct 18, 2019
picard
PICARD_2_3_0: Updated Dockerfile to use specific version of base image
Nov 21, 2018
piler
Add debian package piler/020140707-2-deb/Dockerfile
Oct 18, 2019
pilon
Add debian package pilon/1.23dfsg-1-deb/Dockerfile
Oct 18, 2019
pipdeptree/0.13.2-1-deb-py3
Add debian package pipdeptree/0.13.2-1-deb-py3/Dockerfile
Oct 18, 2019
pirs-profiles
Add debian package pirs-profiles/2.0.2dfsg-8-deb/Dockerfile
Oct 18, 2019
pirs
Add debian package pirs/2.0.2dfsg-8-deb/Dockerfile
Oct 18, 2019
pixelmed-apps
Add debian package pixelmed-apps/20150917git20151209.36f3174dfsg-1-de…
Oct 18, 2019
pixelmed-webstart-apps
Add debian package pixelmed-webstart-apps/20150917git20151209.36f3174…
Oct 18, 2019
pixelmed-www
Add debian package pixelmed-www/20150917git20151209.36f3174dfsg-1-deb…
Oct 18, 2019
placnet
Add debian package placnet/1.03-3-deb/Dockerfile
Oct 18, 2019
plasmidomics
Add debian package plasmidomics/0.2.0-7-deb/Dockerfile
Oct 18, 2019
plasmidseeker/1.0dfsg-1-deb
Add debian package plasmidseeker/1.0dfsg-1-deb/Dockerfile
Oct 18, 2019
plast-example
Add debian package plast-example/2.3.2dfsg-1-deb/Dockerfile
Oct 18, 2019
plast
Add debian package plast/2.3.2dfsg-1-deb/Dockerfile
Oct 18, 2019
plastimatch
Add debian package plastimatch/1.7.4dfsg.1-2-deb/Dockerfile
Oct 18, 2019
plink
Add debian package plink/1.07dfsg-2-deb/Dockerfile
Oct 18, 2019
plink1.9
Add debian package plink1.9/1.90b6.6-181012-1-deb/Dockerfile
Oct 18, 2019
plip
Add debian package plip/1.4.3bdfsg-2-deb/Dockerfile
Oct 18, 2019
poa
Add debian package poa/2.020060928-7-deb/Dockerfile
Oct 18, 2019
pondus/0.8.0-4-deb
Add debian package pondus/0.8.0-4-deb/Dockerfile
Oct 18, 2019
populations/1.2.33svn0120106dfsg-2-deb
Add debian package populations/1.2.33svn0120106dfsg-2-deb/Dockerfile
Oct 18, 2019
porechop/0.2.4dfsg-1-deb
Add debian package porechop/0.2.4dfsg-1-deb/Dockerfile
Oct 18, 2019
poretools-data
Add debian package poretools-data/0.6.0dfsg-3-deb/Dockerfile
Oct 18, 2019
poretools
Add debian package poretools/0.6.0dfsg-3-deb/Dockerfile
Oct 18, 2019
pp-popularity-contest
Add debian package pp-popularity-contest/1.0.6-4b1-deb/Dockerfile
Oct 18, 2019
praat
Add debian package praat/6.0.48-1-deb/Dockerfile
Oct 18, 2019
prank
Add debian package prank/0.0.170427dfsg-2-deb/Dockerfile
Oct 21, 2019
predictnls
Add debian package predictnls/1.0.20-5-deb/Dockerfile
Oct 21, 2019
predictprotein
Add debian package predictprotein/1.1.08-1-deb/Dockerfile
Oct 21, 2019
prime-phylo
Add debian package prime-phylo/1.0.11-7b1-deb/Dockerfile
Oct 21, 2019
primer3
Add debian package primer3/2.4.0-2-deb/Dockerfile
Oct 21, 2019
proalign
Add debian package proalign/0.603-4-deb/Dockerfile
Oct 21, 2019
probabel
Add debian package probabel/0.5.0dfsg-3-deb/Dockerfile
Oct 21, 2019
probalign
Add debian package probalign/1.4-8-deb/Dockerfile
Oct 21, 2019
probcons-extra
Add debian package probcons-extra/1.12-12-deb/Dockerfile
Oct 21, 2019
probcons
Add debian package probcons/1.12-12-deb/Dockerfile
Oct 21, 2019
proda
Add debian package proda/1.0-12-deb/Dockerfile
Oct 21, 2019
prodigal
Add debian package prodigal/1-2.6.3-4-deb/Dockerfile
Oct 21, 2019
profbval
Add debian package profbval/1.0.22-6-deb/Dockerfile
Oct 21, 2019
profisis
Add debian package profisis/1.0.11-5-deb/Dockerfile
Oct 21, 2019
profnet-bval
Add debian package profnet-bval/1.0.22-6-deb/Dockerfile
Oct 21, 2019
profnet-chop
Add debian package profnet-chop/1.0.22-6-deb/Dockerfile
Oct 21, 2019
profnet-con
Add debian package profnet-con/1.0.22-6-deb/Dockerfile
Oct 21, 2019
profnet-isis
Add debian package profnet-isis/1.0.22-6-deb/Dockerfile
Oct 21, 2019
profnet-md
Add debian package profnet-md/1.0.22-6-deb/Dockerfile
Oct 21, 2019
profnet-norsnet
Add debian package profnet-norsnet/1.0.22-6-deb/Dockerfile
Oct 21, 2019
profnet-prof
Add debian package profnet-prof/1.0.22-6-deb/Dockerfile
Oct 21, 2019
profnet-snapfun
Add debian package profnet-snapfun/1.0.22-6-deb/Dockerfile
Oct 21, 2019
profphd-net
Add debian package profphd-net/1.0.22-6-deb/Dockerfile
Oct 21, 2019
profphd-utils
Add debian package profphd-utils/1.0.10-5-deb/Dockerfile
Oct 21, 2019
profphd
Add debian package profphd/1.0.42-3-deb/Dockerfile
Oct 21, 2019
proftmb
Add debian package proftmb/1.1.12-8-deb/Dockerfile
Oct 21, 2019
progressive-cactus/0.1
remove CMD
May 20, 2019
progressivemauve
Add debian package progressivemauve/1.2.04713dfsg-4-deb/Dockerfile
Oct 21, 2019
proteinortho
Add debian package proteinortho/5.16.bdfsg-1-deb/Dockerfile
Oct 21, 2019
proteinprophet/201510131012
remove CMD
May 20, 2019
proteowizard/3_0_9740
PROTEOWIZARD: Updated Dockerfile to use specific version of base image
Nov 21, 2018
prottest
Add debian package prottest/3.4.2dfsg-3-deb/Dockerfile
Oct 21, 2019
pscan-chip-data/1.1-2-deb
Add debian package pscan-chip-data/1.1-2-deb/Dockerfile
Oct 21, 2019
pscan-chip/1.1-2-deb
Add debian package pscan-chip/1.1-2-deb/Dockerfile
Oct 21, 2019
pscan-tfbs/1.2.2-3-deb
Add debian package pscan-tfbs/1.2.2-3-deb/Dockerfile
Oct 21, 2019
psortb
Add debian package psortb/3.0.6dfsg-1b1-deb/Dockerfile
Oct 21, 2019
pvrg-jpeg
Add debian package pvrg-jpeg/1.2.1dfsg1-6-deb/Dockerfile
Oct 21, 2019
pybedtools-bin/0.8.0-1-deb
Add debian package pybedtools-bin/0.8.0-1-deb/Dockerfile
Oct 21, 2019
pybedtools/0.8.0-1-deb-py3
Add debian package pybedtools/0.8.0-1-deb-py3/Dockerfile
Oct 21, 2019
pycorrfit
Add debian package pycorrfit/1.1.5dfsg-1-deb/Dockerfile
Oct 21, 2019
pyfaidx
Add debian package pyfaidx/0.5.5.2-1-deb-py3/Dockerfile
Oct 21, 2019
pyflow/1.1.20-1-deb-py2
Add debian package pyflow/1.1.20-1-deb-py2/Dockerfile
Oct 21, 2019
pymol-jupiter/1.0.0
PYMOL-JUPITER: fixed error in build (obsolete library, using a newer …
Nov 21, 2018
pymummer
Add debian package pymummer/0.10.3-2-deb-py3/Dockerfile
Oct 21, 2019
pynast
Add debian package pynast/1.2.2-4-deb/Dockerfile
Oct 21, 2019
pyqi
Add debian package pyqi/0.3.2dfsg-3-deb/Dockerfile
Oct 21, 2019
pysam-tests
Add debian package pysam-tests/0.15.2ds-2-deb-py2/Dockerfile
Oct 21, 2019
pysam
Add debian package pysam/0.15.2ds-2-deb-py3/Dockerfile
Oct 21, 2019
pyscanfcs
Add debian package pyscanfcs/0.3.2ds-2-deb/Dockerfile
Oct 21, 2019
pyvcf
Add debian package pyvcf/0.6.8git20170215.476169c-1-deb/Dockerfile
Oct 21, 2019
qcli
Add debian package qcli/0.1.1-3-deb-py2/Dockerfile
Oct 21, 2019
qcumber/1.0.14dfsg-1-deb
add debian qcumber
Aug 19, 2019
qrisk2
Add debian package qrisk2/0.1.20150729-4-deb/Dockerfile
Oct 21, 2019
qsopt-ex
Add debian package qsopt-ex/2.5.10.3-2-deb/Dockerfile
Oct 21, 2019
qtltools-example
Add debian package qtltools-example/1.1dfsg-3-deb/Dockerfile
Oct 21, 2019
qtltools
Add debian package qtltools/1.1dfsg-3b1-deb/Dockerfile
Oct 21, 2019
quorum/1.1.1-2-deb
Add debian package quorum/1.1.1-2-deb/Dockerfile
Oct 21, 2019
r-other-mott-happy.hbrem/2.4-1-deb
Add debian package r-other-mott-happy.hbrem/2.4-1-deb/Dockerfile
Apr 5, 2018
racon
Add debian package racon/1.3.2-1b1-deb/Dockerfile
Oct 21, 2019
radiant
Add debian package radiant/2.7dfsg-2-deb/Dockerfile
Oct 21, 2019
rambo-k
Add debian package rambo-k/1.21dfsg-2-deb/Dockerfile
Oct 21, 2019
rampler
Add debian package rampler/1.1.0-1-deb/Dockerfile
Oct 21, 2019
rapmap-dev/0.12.0dfsg-3-deb
Add debian package rapmap-dev/0.12.0dfsg-3-deb/Dockerfile
Oct 21, 2019
rapmap-example-data/0.12.0dfsg-3-deb
Add debian package rapmap-example-data/0.12.0dfsg-3-deb/Dockerfile
Oct 21, 2019
rapmap
Add debian package rapmap/0.12.0dfsg-3b1-deb/Dockerfile
Oct 21, 2019
raremetalworker/4.13.7
remove CMD
May 20, 2019
raster3d
Add debian package raster3d/3.0-3-5-deb/Dockerfile
Oct 21, 2019
rate4site
Add debian package rate4site/3.0.0-6-deb/Dockerfile
Oct 21, 2019
raxml
Add debian package raxml/8.2.12dfsg-1-deb/Dockerfile
Oct 21, 2019
ray-extra
Add debian package ray-extra/2.3.1-6-deb/Dockerfile
Oct 21, 2019
ray
Add debian package ray/2.3.1-6-deb/Dockerfile
Oct 21, 2019
rdflib-jsonld
Add debian package rdflib-jsonld/0.4.0-4-deb-py3/Dockerfile
Oct 21, 2019
rdp-alignment
Add debian package rdp-alignment/1.2.0-5-deb/Dockerfile
Oct 21, 2019
rdp-classifier
Add debian package rdp-classifier/2.10.2-4-deb/Dockerfile
Oct 21, 2019
rdp-readseq
Add debian package rdp-readseq/2.0.2-6-deb/Dockerfile
Oct 21, 2019
readseq
Add debian package readseq/1-13-deb/Dockerfile
Oct 21, 2019
reapr
Add debian package reapr/1.0.18dfsg-4-deb/Dockerfile
Oct 21, 2019
relion-bin-plusgui
Add debian package relion-bin-plusgui/1.4dfsg-4-deb/Dockerfile
Oct 21, 2019
relion-bin-plusmpi-plusgui
Add debian package relion-bin-plusmpi-plusgui/1.4dfsg-4-deb/Dockerfile
Oct 21, 2019
relion-bin-plusmpi
Add debian package relion-bin-plusmpi/1.4dfsg-4-deb/Dockerfile
Oct 21, 2019
relion-bin
Add debian package relion-bin/1.4dfsg-4-deb/Dockerfile
Oct 21, 2019
relion-binplusmpi/1.4dfsg-2b2-deb
Add debian package relion-binplusmpi/1.4dfsg-2b2-deb/Dockerfile
Apr 5, 2018
repeatmasker-recon
Add debian package repeatmasker-recon/1.08-4-deb/Dockerfile
Oct 21, 2019
reprof
Add debian package reprof/1.0.1-6-deb/Dockerfile
Oct 21, 2019
rna-star
Add debian package rna-star/2.7.0adfsg-1-deb/Dockerfile
Oct 21, 2019
rnahybrid
Add debian package rnahybrid/2.1.2-5-deb/Dockerfile
Oct 21, 2019
roary
Add debian package roary/3.12.0dfsg-2-deb/Dockerfile
Oct 21, 2019
roguenarok/1.0-3-deb
Add debian package roguenarok/1.0-3-deb/Dockerfile
Oct 21, 2019
rpg/1.1.0
Add RPG container (#333)
Jun 7, 2019
rsem
Add debian package rsem/1.3.1dfsg-1-deb/Dockerfile
Oct 21, 2019
rstudio-proteomics/1.0.0
updated rstudio-proteomics
Mar 29, 2018
rtax
Add debian package rtax/0.984-6-deb/Dockerfile
Oct 21, 2019
ruby-rgfa
Add debian package ruby-rgfa/1.3.1dfsg-1-deb/Dockerfile
Oct 21, 2019
ruffus
Add debian package ruffus/2.8.1-4-deb-py3/Dockerfile
Oct 21, 2019
runcircos-gui
Add debian package runcircos-gui/0.0git20180828.97703b9-1-deb/Dockerfile
Oct 21, 2019
saint
Add debian package saint/2.5.0dfsg-3-deb/Dockerfile
Oct 21, 2019
saintq/0.0.2
SAINTQ: Updated Dockerfile to use specific version of base image
Dec 3, 2018
salmid
Add debian package salmid/0.1.23-1-deb/Dockerfile
Oct 21, 2019
salmon
Add debian package salmon/0.12.0ds1-1b1-deb/Dockerfile
Oct 21, 2019
samblaster/0.1.24-2-deb
add debian samblaster
Aug 19, 2019
samtools-test
Add debian package samtools-test/1.9-4-deb/Dockerfile
Oct 21, 2019
samtools
Add debian package samtools/1.9-4-deb/Dockerfile
Oct 21, 2019
sbml5/5.17.2dfsg-3-deb-py3
Add debian package sbml5/5.17.2dfsg-3-deb-py3/Dockerfile
Oct 21, 2019
sbmltoolbox
Add debian package sbmltoolbox/4.1.0-4-deb/Dockerfile
Oct 21, 2019
schema-salad
Add debian package schema-salad/3.0.20181206233650-2-deb-py3/Dockerfile
Oct 21, 2019
scoary
Add debian package scoary/1.6.16-1-deb/Dockerfile
Oct 21, 2019
screed
Add debian package screed/1.0-3-deb-py3/Dockerfile
Oct 21, 2019
scrm
Add debian package scrm/1.7.3-1-deb/Dockerfile
Oct 21, 2019
scythe
Add debian package scythe/0.994git20141017.20d3cff-1-deb/Dockerfile
Oct 21, 2019
searchgui
SEARCHGUI:2.8.6: Fixed cmd line missing arg
Dec 11, 2018
seaview
Add debian package seaview/1-4.7-1-deb/Dockerfile
Oct 21, 2019
seer
Add debian package seer/1.1.4-2b2-deb/Dockerfile
Oct 21, 2019
segemehl/0.3.4-1-deb
Add debian package segemehl/0.3.4-1-deb/Dockerfile
Oct 21, 2019
seq_crumbs/0.1.9
remove CMD
May 20, 2019
seqan-apps
Add debian package seqan-apps/2.4.0dfsg-11-deb/Dockerfile
Oct 21, 2019
seqan-dev
Add debian package seqan-dev/1.4.2dfsg-3-deb/Dockerfile
Oct 21, 2019
seqmagick/0.7.0-1-deb
Add debian package seqmagick/0.7.0-1-deb/Dockerfile
Oct 21, 2019
seqprep-data
Add debian package seqprep-data/1.3.2-3-deb/Dockerfile
Oct 21, 2019
seqprep
Add debian package seqprep/1.3.2-3-deb/Dockerfile
Oct 21, 2019
seqsero
Add debian package seqsero/1.0.1dfsg-1-deb/Dockerfile
Oct 21, 2019
seqtk
Add debian package seqtk/1.3-1-deb/Dockerfile
Oct 21, 2019
sga
Add debian package sga/0.10.15-4-deb/Dockerfile
Oct 21, 2019
shotmap/1.0.0
remove CMD
May 20, 2019
sibsim4
Add debian package sibsim4/0.20-4-deb/Dockerfile
Oct 21, 2019
sickle
Add debian package sickle/1.33git20150314.f3d6ae3-1-deb/Dockerfile
Oct 21, 2019
sigma-align
Add debian package sigma-align/1.1.3-6-deb/Dockerfile
Oct 21, 2019
sim4
Add debian package sim4/0.0.20121010-5-deb/Dockerfile
Oct 21, 2019
sim4db
Add debian package sim4db/020150903r2013-6-deb/Dockerfile
Oct 21, 2019
simid
added phenomenal simid
Mar 29, 2018
simpleitk/1.0.1-3-deb-py3
Add debian package simpleitk/1.0.1-3-deb-py3/Dockerfile
Oct 21, 2019
sitplus-data/1.0.3-5.1-deb
Add debian package sitplus-data/1.0.3-5.1-deb/Dockerfile
Apr 5, 2018
sitplus/1.0.3-5.1-deb
Add debian package sitplus/1.0.3-5.1-deb/Dockerfile
Apr 5, 2018
skbio/0.5.1-2-deb-py3
Add debian package skbio/0.5.1-2-deb-py3/Dockerfile
Jun 18, 2018
sleepyhead
Add debian package sleepyhead/1.0.0-beta-2dfsg-6-deb/Dockerfile
Oct 21, 2019
smalr/1.1dfsg-2-deb
Add debian package smalr/1.1dfsg-2-deb/Dockerfile
Oct 21, 2019
smalt
Add debian package smalt/0.7.6-8-deb/Dockerfile
Oct 21, 2019
smithwaterman
Add debian package smithwaterman/0.0git20160702.2610e25-7-deb/Dockerfile
Oct 21, 2019
smrtanalysis-dev/020161126-deb
Add debian package smrtanalysis-dev/020161126-deb/Dockerfile
Apr 5, 2018
smrtanalysis/020161126-deb
Add debian package smrtanalysis/020161126-deb/Dockerfile
Apr 5, 2018
snakemake
Add debian package snakemake/5.4.0-1-deb/Dockerfile
Oct 21, 2019
snap-aligner
Add debian package snap-aligner/1.0beta.18dfsg-3-deb/Dockerfile
Oct 21, 2019
snap
Add debian package snap/2013-11-29-9-deb/Dockerfile
Oct 21, 2019
sniffles
Add debian package sniffles/1.0.11ds-1-deb/Dockerfile
Oct 21, 2019
snp-sites
Add debian package snp-sites/2.4.1-1-deb/Dockerfile
Oct 21, 2019
snpeff/4.1k
remove CMD
May 20, 2019
snpomatic
Add debian package snpomatic/1.0-4-deb/Dockerfile
Oct 21, 2019
soapaligner/2.20-3-deb
add debian soapaligner
Aug 19, 2019
soapdenovo
Add debian package soapdenovo/1.05-5-deb/Dockerfile
Oct 21, 2019
soapdenovo2
Add debian package soapdenovo2/241dfsg-3-deb/Dockerfile
Oct 21, 2019
soapec/2.03
remove CMD
May 20, 2019
soapsnp/1.03-3-deb
add debian soapsnp
Aug 19, 2019
sofa-apps
Add debian package sofa-apps/1.0beta4-12b2-deb/Dockerfile
Oct 21, 2019
sofa-data
Add debian package sofa-data/1.0beta4-12-deb/Dockerfile
Oct 21, 2019
sofa-tutorials
Add debian package sofa-tutorials/1.0beta4-12-deb/Dockerfile
Oct 21, 2019
sortmerna
Add debian package sortmerna/2.1-3-deb/Dockerfile
Oct 21, 2019
spaced
Add debian package spaced/1.2.0-201605dfsg-1-deb/Dockerfile
Oct 21, 2019
spades
Add debian package spades/3.13.0dfsg2-2-deb/Dockerfile
Oct 21, 2019
spectra-cluster-cli
SPECTRA-CLUSTER-CLI:1.0-beta Fixed cmd line
Dec 12, 2018
spectra/0.0.11-1-deb-py3
Add debian package spectra/0.0.11-1-deb-py3/Dockerfile
Oct 21, 2019
sphinxcontrib-autoprogram
Add debian package sphinxcontrib-autoprogram/0.1.5-1-deb/Dockerfile
Oct 21, 2019
sphinxcontrib.autoprogram
Add debian package sphinxcontrib.autoprogram/0.1.5-1-deb-py3/Dockerfile
Oct 21, 2019
spoa
Add debian package spoa/1.1.5-1-deb/Dockerfile
Oct 21, 2019
sprai
Add debian package sprai/0.9.9.23dfsg-2-deb/Dockerfile
Oct 21, 2019
spread-phy
Add debian package spread-phy/1.0.7dfsg-2-deb/Dockerfile
Oct 21, 2019
sqlsoup
Add debian package sqlsoup/0.9.1-3-deb-py3/Dockerfile
Oct 21, 2019
sqt/0.8.0-3-deb-py3
Add debian package sqt/0.8.0-3-deb-py3/Dockerfile
Oct 21, 2019
squizz
Add debian package squizz/0.99ddfsg-2-deb/Dockerfile
Oct 21, 2019
sra-toolkit
Add debian package sra-toolkit/2.9.3dfsg-1b1-deb/Dockerfile
Oct 21, 2019
srst2
Add debian package srst2/0.2.0-6-deb/Dockerfile
Oct 21, 2019
ssaha2/2.5.5
fix syntax error
May 20, 2019
ssake
Add debian package ssake/4.0-2-deb/Dockerfile
Oct 21, 2019
sspace
Add debian package sspace/2.1.1dfsg-4-deb/Dockerfile
Oct 21, 2019
ssw-align
Add debian package ssw-align/1.1-2-deb/Dockerfile
Oct 21, 2019
stacks-web
Add debian package stacks-web/2.2dfsg-1-deb/Dockerfile
Oct 21, 2019
stacks
Add debian package stacks/2.2dfsg-1-deb/Dockerfile
Oct 21, 2019
staden-common
Add debian package staden-common/2.0.0b11-4-deb/Dockerfile
Oct 21, 2019
staden-io-lib-utils
Add debian package staden-io-lib-utils/1.14.11-6-deb/Dockerfile
Oct 21, 2019
staden
Add debian package staden/2.0.0b11-4-deb/Dockerfile
Oct 21, 2019
strelka/2.9.7
STRELKA: Updated Dockerfile to use specific version of base image
Nov 21, 2018
subread-data
Add debian package subread-data/1.6.3dfsg-1-deb/Dockerfile
Oct 21, 2019
subread
Add debian package subread/1.6.3dfsg-1-deb/Dockerfile
Oct 21, 2019
suffixfsm/0.0git20150829.56e4718-2-deb
Add debian package suffixfsm/0.0git20150829.56e4718-2-deb/Dockerfile
Oct 21, 2019
suitename
Add debian package suitename/0.3.070628-2-deb/Dockerfile
Oct 21, 2019
sumaclust
Add debian package sumaclust/1.0.31-2-deb/Dockerfile
Oct 21, 2019
sumatra
Add debian package sumatra/1.0.31-2-deb/Dockerfile
Oct 21, 2019
sumtrees
Add debian package sumtrees/4.4.0-1-deb/Dockerfile
Oct 21, 2019
surankco
Add debian package surankco/0.0.r5dfsg-2-deb/Dockerfile
Oct 21, 2019
swarm
Add debian package swarm/2.2.2dfsg-2-deb/Dockerfile
Oct 21, 2019
sweed/3.2.1dfsg-1-deb
add debian sweed
Aug 19, 2019
t-coffee
Add debian package t-coffee/12.00.7fb08c2-4-deb/Dockerfile
Oct 21, 2019
tabix
Add debian package tabix/1.9-11-deb/Dockerfile
Oct 21, 2019
talon
Upload Dockerfile for TALON version 5.0. (#362)
Apr 9, 2020
tandem
Fixed software name for new X!Tandem version.
Jan 8, 2019
tantan
Add debian package tantan/22-1-deb/Dockerfile
Oct 21, 2019
telescoper/1.0.0
remove CMD
May 20, 2019
test-ci
text biocontainers ci (#438)
Mar 18, 2022
theseus
Add debian package theseus/3.3.0-8-deb/Dockerfile
Oct 21, 2019
tifffile
Add debian package tifffile/20181128-1-deb/Dockerfile
Oct 21, 2019
tigr-glimmer
Add debian package tigr-glimmer/3.02b-2-deb/Dockerfile
Oct 21, 2019
tm-align
Add debian package tm-align/20170708dfsg-2-deb/Dockerfile
Oct 21, 2019
tnseq-transit
Add debian package tnseq-transit/2.3.4-1-deb/Dockerfile
Oct 21, 2019
toil/3.18.0-2-deb
new debian tool
Jul 10, 2019
tophat/2.1.1
remove CMD
May 20, 2019
toppas/1.11.1-3
TOPPAS_1_11_1-3: using a legacy ubuntu release (trusty) as library ve…
Nov 28, 2018
toppred
Add debian package toppred/1.10-7-deb/Dockerfile
Oct 21, 2019
tpmcalculator/0.0.1
remove CMD
May 20, 2019
tpp
Updated for TPP 5.2 release version (#321)
Apr 30, 2019
trace2dbest/3.0.1-1-deb
Add debian package trace2dbest/3.0.1-1-deb/Dockerfile
Oct 21, 2019
tracetuner/3.0.6betadfsg-1-deb
Add debian package tracetuner/3.0.6betadfsg-1-deb/Dockerfile
Oct 21, 2019
transcriptclean
Add Dockerfile for TranscriptClean version 2.0.2 (#345)
Oct 15, 2019
transdecoder
Add debian package transdecoder/5.0.1-2-deb/Dockerfile
Oct 21, 2019
transrate-tools
Add debian package transrate-tools/1.0.0-2-deb/Dockerfile
Oct 21, 2019
transtermhp
Add debian package transtermhp/2.09-4-deb/Dockerfile
Oct 21, 2019
tree-ppuzzle
Add debian package tree-ppuzzle/5.2-11-deb/Dockerfile
Oct 21, 2019
tree-puzzle
Add debian package tree-puzzle/5.2-11-deb/Dockerfile
Oct 21, 2019
treetime/0.5.3-1-deb-py3
Add debian package treetime/0.5.3-1-deb-py3/Dockerfile
Oct 21, 2019
treeview
Add debian package treeview/1.1.6.4dfsg1-4-deb/Dockerfile
Oct 21, 2019
treeviewx
Add debian package treeviewx/0.5.1git20100823.7e4d0e9-1-deb/Dockerfile
Oct 21, 2019
trimmomatic
Add debian package trimmomatic/0.38dfsg-1-deb/Dockerfile
Oct 21, 2019
trinityrnaseq
Add debian package trinityrnaseq/2.6.6dfsg-6-deb/Dockerfile
Oct 21, 2019
tvc/5.0.3git20151221.80e144edfsg-2-deb
add debian tvc tool
Jul 11, 2019
typed-ast
Add debian package typed-ast/1.3.1-1-deb-py3/Dockerfile
Oct 21, 2019
uc-echo
Add debian package uc-echo/1.12-11-deb/Dockerfile
Oct 21, 2019
unanimity/3.3.0dfsg-2.1-deb
add debian unanimity
Aug 19, 2019
unicycler-data
Add debian package unicycler-data/0.4.7dfsg-2-deb/Dockerfile
Oct 21, 2019
unicycler
Add debian package unicycler/0.4.7dfsg-2-deb/Dockerfile
Oct 21, 2019
varna
Add debian package varna/3-93ds-2-deb/Dockerfile
Oct 21, 2019
vcftools
Add debian package vcftools/0.1.16-1-deb/Dockerfile
Oct 21, 2019
velvet-example
Add debian package velvet-example/1.2.10dfsg1-5-deb/Dockerfile
Oct 21, 2019
velvet-long
Add debian package velvet-long/1.2.10dfsg1-5-deb/Dockerfile
Oct 21, 2019
velvet-tests
Add debian package velvet-tests/1.2.10dfsg1-5-deb/Dockerfile
Oct 21, 2019
velvet/1.2.10
remove CMD
May 20, 2019
velvetoptimiser
Add debian package velvetoptimiser/2.2.6-2-deb/Dockerfile
Oct 21, 2019
vg/1.23.0-plusds-1-deb
vg 1.23.0+ds-1 (#361)
Apr 9, 2020
visionegg/1.2.1-2-deb-py2
Add debian package visionegg/1.2.1-2-deb-py2/Dockerfile
Jun 18, 2018
vsearch
Add debian package vsearch/2.10.4-1-deb/Dockerfile
Oct 21, 2019
vtk-dicom-tools
Add debian package vtk-dicom-tools/0.8.9-1-deb/Dockerfile
Oct 21, 2019
vtk-dicom
Add debian package vtk-dicom/0.8.9-1-deb-py3/Dockerfile
Oct 21, 2019
vtkgdcm
Add debian package vtkgdcm/2.8.8-9-deb-py3/Dockerfile
Oct 21, 2019
wgerman-medical/20160103-3-deb
Add debian package wgerman-medical/20160103-3-deb/Dockerfile
Oct 21, 2019
wigeon
Add debian package wigeon/20101212dfsg1-2-deb/Dockerfile
Oct 21, 2019
wise-data
Add debian package wise-data/2.4.1-21-deb/Dockerfile
Oct 21, 2019
wise
Add debian package wise/2.4.1-21-deb/Dockerfile
Oct 21, 2019
xmedcon
Add debian package xmedcon/0.16.1dfsg-1-deb/Dockerfile
Oct 21, 2019
xopen
Add debian package xopen/0.5.0-2-deb-py3/Dockerfile
Oct 21, 2019
yaggo
Add debian package yaggo/1.5.10-2-deb/Dockerfile
Oct 21, 2019
yaha/0.1.83-1-deb
new debian yaha software
Jul 10, 2019
zalign
Add debian package zalign/0.9.1-4-deb/Dockerfile
Oct 21, 2019
zorro/1.0.0
ZORRO: Fixed download URL, build now works
Nov 21, 2018
zstd
Add debian package zstd/1.3.8dfsg-3-deb/Dockerfile
Oct 21, 2019
.gitignore
minor changes
Mar 26, 2018
.gitmodules
added phenomenal simid
Mar 29, 2018
LICENSE
copied from containers_old
Sep 20, 2015
MANIFEST.md
Change in the main structure of the recipes as the specification
Mar 26, 2018
PULL_REQUEST_TEMPLATE.md
Update PULL_REQUEST_TEMPLATE.md
Jul 3, 2018
README.md
Drop extra space in README.md (#399)
Mar 23, 2021
bioconda.txt
Add debian package bioconda.txt
Apr 4, 2018