@BioJulia

BioJulia

Bioinformatics and Computational Biology in Julia

Pinned repositories

  1. Bio.jl

    Bioinformatics and Computational Biology Infrastructure for Julia

    Julia 187 54

  2. Contributing

    Documentation, guidelines, and policy on contributing to all BioJulia repositories

    4 1

  3. BioCore.jl

    Core types and interfaces for BioJulia packages

    Julia 3 5

  4. BioSymbols.jl

    Nucleic and amino acid primitive types and alphabets

    Julia 5 4

  5. BioSequences.jl

    Biological sequences for the julia language

    Julia 11 8

  6. GeneticVariation.jl

    Datastructures and algorithms for working with genetic variation

    Julia 4 3

  • A julia package to parse and write MMTF file

    Julia 1 MIT Updated Jul 19, 2018
  • Bioinformatics and Computational Biology Infrastructure for Julia

    Julia 187 54 MIT Updated Jul 19, 2018
  • Julia interface to APIs for various bio-related web services

    Julia 3 6 1 issue needs help Updated Jul 19, 2018
  • Fast, flexible zlib bindings.

    Julia 13 14 Updated Jul 18, 2018
  • A julia package to read, write and manipulate macromolecular structures

    Julia 5 4 Updated Jul 17, 2018
  • Fast composable IO streams

    Julia 17 15 Updated Jul 10, 2018
  • A julia code generator for regular expressions

    Julia 34 7 Updated Jul 9, 2018
  • A collection of bioinformatics file format specimens to test against

    Roff 22 8 Updated Jul 8, 2018
  • Nucleic and amino acid primitive types and alphabets

    Julia 5 4 MIT Updated Jul 6, 2018
  • A wrapper for the BSG library and suite of tools

    MIT Updated Jul 6, 2018
  • Biological sequences for the julia language

    Julia 11 8 Updated Jul 3, 2018
  • A data structure for efficient manipulation of sets of intervals

    Julia 16 11 Updated Jul 3, 2018
  • Stickers and logos for BioJulia packages

    MIT Updated Jul 2, 2018
  • For analysis of microbiome and microbial community data

    Julia 6 4 Updated Jun 29, 2018
  • Julia 5 2 Updated Jun 29, 2018
  • The Wavelet Matrix

    Julia 8 4 Updated Jun 26, 2018
  • Sequence alignment tools

    Julia 3 5 MIT Updated Jun 22, 2018
  • The BioJulia package for working with phylogenetic trees and geneologies.

    Julia 3 3 MIT Updated Jun 22, 2018
  • Datastructures and algorithms for working with genetic variation

    Julia 4 3 MIT Updated Jun 22, 2018
  • BGZF Stream

    Julia 6 3 Updated Jun 22, 2018
  • Tools for genomic features in Julia.

    Julia 1 4 Updated Jun 21, 2018
  • Interfaces to common external biological tools from julia scripts and programs

    Julia 1 1 MIT Updated Jun 21, 2018
  • Documentation, guidelines, and policy on contributing to all BioJulia repositories

    4 1 MIT Updated Jun 16, 2018
  • Biological sequence graph representations for genome analysis

    Julia 2 Updated Jun 2, 2018
  • A package containing methods for looking at the effects of natural selection

    Julia 1 1 Updated May 16, 2018
  • Abstracts for conference talks, posters, and papers

    CC0-1.0 Updated May 3, 2018
  • Logos and other assets

    JavaScript 1 2 CC0-1.0 Updated May 3, 2018
  • Julia package release bot

    Python 7 Updated May 3, 2018
  • Count-min Sketch implementation for Julia

    Julia 1 2 Updated May 3, 2018
  • FM-index for full-text search

    Julia 8 4 Updated May 3, 2018