@BioJulia

BioJulia

Bioinformatics and Computational Biology in Julia

Pinned repositories

  1. Bio.jl

    Bioinformatics and Computational Biology Infrastructure for Julia

    Julia 148 44

  2. Libz.jl

    Fast, flexible zlib bindings.

    Julia 11 9

  3. BioTutorials

    Tutorial Notebooks of BioJulia

    Jupyter Notebook 8

  4. BGZFStreams.jl

    BGZF Stream

    Julia 6 1

  5. Contributing

    Documentation, guidelines, and policy on contributing to all BioJulia repositories

    3 1

  6. biojulia.github.io

    Project website

  • Fast composable IO streams

    Julia 12 8 Updated Jan 17, 2017
  • Bioinformatics and Computational Biology Infrastructure for Julia

    Julia 148 44 Updated Jan 15, 2017
  • Julia code generator for regular expressions

    Julia 7 Updated Jan 15, 2017
  • Fast, flexible zlib bindings.

    Julia 11 9 Updated Jan 10, 2017
  • Compress bit vectors using the Word Aligned Hybrid method.

    Julia 1 2 Updated Nov 21, 2016
  • A collection of bioinformatics file format specimens to test against

    Groff 23 6 Updated Nov 17, 2016
  • Logos and other assets

    JavaScript Updated Oct 19, 2016
  • A data structure for efficient manipulation of sets of intervals

    Julia 12 7 Updated Sep 30, 2016
  • Ragel 7 fork with a few Julia fixes

    C++ 1 Updated Sep 28, 2016
  • Documentation, guidelines, and policy on contributing to all BioJulia repositories

    3 1 Updated Sep 13, 2016
  • BGZF Stream

    Julia 6 1 Updated Sep 13, 2016
  • Tutorial Notebooks of BioJulia

    Jupyter Notebook 8 Updated Sep 11, 2016
  • Utilities for working with the Common Workflow Language (CWL) from Julia

    2 Updated Jul 11, 2016
  • fogsaa

    Forked from kjenova/fogsaa

    Fast Optimal Global Sequence Alignment Algorithm

    Julia 2 Updated Jul 4, 2016
  • A BioJulia fork of the mkdocs cinder theme.

    CSS 23 Updated Jul 1, 2016
  • Fully indexable dictionaries - access/rank/select operations

    Jupyter Notebook 5 2 Updated May 24, 2016
  • Data structure for reference sequences

    Julia Updated May 6, 2016
  • Count-min Sketch implementation for Julia

    Julia 1 Updated Apr 4, 2016
  • A version manager for Julia

    1 Updated Mar 25, 2016
  • Slides and materials for talks about BioJulia

    Jupyter Notebook 2 Updated Jan 12, 2016
  • Project website

    Updated Nov 22, 2015
  • FM-index for full-text search

    Julia 5 1 Updated Nov 21, 2015
  • Prototype of the new JuliaStats NullableArrays package

    Julia 17 Updated Nov 14, 2015
  • The Wavelet Matrix

    Julia 7 3 Updated Nov 7, 2015
  • Population Genetics functions in Julia.

    Updated Nov 6, 2015
  • Julia's package for working on Bioinformatics with DNA, RNA and Protein Sequences

    Julia 6 11 Updated Aug 25, 2015
  • Types and methods for interacting with Dat from the Julia REPL and programs.

    2 1 Updated Jul 5, 2015
  • Julia interface to the Dalliance genome browser

    Julia 4 2 Updated Jun 24, 2015
  • Ragel State Machine Compiler - Experimental Julia Support

    C++ 2 13 Updated Apr 26, 2015
  • Abstracts for conference talks, posters, and papers

    Updated Apr 12, 2015