GenomicFeatures provides utilities for working with interval based genomic annotations. It builds on IntervalTrees to provide a data-structures, algorithms and IO tools for various formats such as BED, GFF3, bigWig and bigBed.
Install GenomicFeatures from the Julia REPL:
using Pkg add("GenomicFeatures") #Pkg.add("GenomicFeatures") for julia prior to v 0.7
If you are interested in the cutting edge of the development, please check out the master branch to try new features before release.
GenomicFeatures is tested against julia
0.6 and current
0.7-dev on Linux,
OS X, and Windows.
|Latest release||Latest build status|
Contributing and Questions
We appreciate contributions from users including reporting bugs, fixing issues, improving performance and adding new features.
Take a look at the CONTRIBUTING file provided with this package for detailed contributor and maintainer guidelines.