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S4 generic functions used in Bioconductor
An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.
Single-cell-related content for the OSCA Book.
Foundation of vector-like and list-like containers in Bioconductor
HTSlib high-throughput sequencing library as an R package
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Administration repository for AnVIL project
Website for bioconductor.org
This python package is for transitioning bioconductor from SVN to git
Browse the Human Cell Atlas data portal
DataFrame representation of SQL database table
Representation and manipulation of genomic intervals
CURRENTLY IN DEVELOPMENT. A package to provide user-friendly access to Human Cell Atlas resources. This package is meant to have similar functionality to the HCA data-explorer https://data.humancellatlas.org/explore/projects.
Tools for building SQLite-based annotation data packages
Download Matrix Data using the HCA API
Foundation of integer range manipulation in Bioconductor
Representation and manipulation of short genomic alignments
HDF5 backend for DelayedArray objects
A package to read, write, and manipulate loom files using LoomExperiments. Uses the loom file format from the Linnarson Lab. https://linnarssonlab.org/loompy/
Client to access ExperimentHub resources
Transform public data resources into Bioconductor Data Structures
An interface to the BOOST graph library
Client for the Bioconductor AnnotationHub web resource
Biobase: Base functions for Bioconductor