@BioinformaticsArchive

BioinformaticsArchive

  • Transposon Insertion and Depletion AnaLyzer

    C 5 Updated Oct 17, 2015
  • BioContext is a text mining system for extracting information about molecular processes in biomedical articles.

    Java 1 Updated Oct 13, 2015
  • getm

    Forked from bergmanlab/getm

    GETM is a tool which is capable of extracting information about the expression of genes from biomedical literature

    Java 1 Updated Oct 13, 2015
  • Species name recognition and normalization software.

    Java 2 Updated Oct 13, 2015
  • abyss

    Forked from bcgsc/abyss

    de novo sequence assembler

    C++ 1 46 Updated Oct 11, 2015
  • Perl software for estimating evolutionary parameters from pooled next-generation sequencing SNP data

    Perl 6 Updated Oct 10, 2015
  • Pan genome pipeline

    Perl 36 Updated Oct 8, 2015
  • SOAPdenovo2 case study website

    Shell 7 Updated Oct 8, 2015
  • QoRTs

    Forked from hartleys/QoRTs

    Quality of RNA-Seq Toolset

    HTML 8 Updated Oct 5, 2015
  • nextflu

    Forked from blab/nextflu

    Real-time tracking of influenza evolution

    Python 20 Updated Sep 28, 2015
  • Chromatin segmentation in R

    HTML 9 Updated Sep 22, 2015
  • pogs

    Forked from foges/pogs

    Proximal Operator Graph Solver

    C++ 21 Updated Sep 16, 2015
  • Uncovering correlated variability in epigenomic datasets using the Karhunen-Loeve Transform

    R 2 Updated Sep 15, 2015
  • ProFET

    Forked from ddofer/ProFET

    ProFET: Protein Feature Engineering Toolkit for Machine Learning

    Python 11 Updated Sep 14, 2015
  • Whole genome focused array SNP typer

    Python 4 Updated Sep 11, 2015
  • A plugin to map genomic regions to protein interactions in the Integrated Genomic Browser.

    Java 3 Updated Sep 1, 2015
  • HTML 18 Updated Aug 27, 2015
  • a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

    C++ 20 Updated Aug 26, 2015
  • Program to run the SOWH test (likelihood-based test used to compare tree topologies which are not specified a priori)

    Perl 2 Updated Aug 22, 2015
  • oddt

    Forked from oddt/oddt

    Open Drug Discovery Toolkit

    Python 13 Updated Aug 18, 2015
  • Large-scale testing for SNP-motif interactions.

    R 5 Updated Aug 18, 2015
  • KAUST Assembly Read Error Correction Tool

    C++ 2 Updated Aug 15, 2015
  • Code for statistical binning and related scripts

    Perl 3 Updated Aug 14, 2015
  • R 5 Updated Aug 13, 2015
  • HGVS variant description extractor

    C++ 2 Updated Aug 13, 2015
  • sct

    Forked from dww100/sct

    SCT: Suite of tools for atomistic modelling of SAS data

    Python 2 Updated Aug 12, 2015
  • An automated pipeline for processing DamID sequencing datasets

    Perl 3 Updated Aug 8, 2015
  • Tool to identify common RNA background in PAR-CLIP datasets

    Python 1 Updated Aug 5, 2015
  • Software package of the genotype-frequency estimator (GFE)

    Prolog 1 Updated Jul 28, 2015
  • fermikit

    Forked from lh3/fermikit

    De novo assembly based variant calling pipeline for Illumina short reads

    TeX 9 Updated Jul 23, 2015
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