From 025f10d0394e61dfd1f0e66b855af0df03db9d10 Mon Sep 17 00:00:00 2001 From: Johnathan Wong Date: Tue, 21 Jan 2020 15:05:46 -0800 Subject: [PATCH 1/2] stHashIterator.hpp: add hash array description --- stHashIterator.hpp | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/stHashIterator.hpp b/stHashIterator.hpp index 70929da..25f1d8f 100644 --- a/stHashIterator.hpp +++ b/stHashIterator.hpp @@ -154,7 +154,9 @@ class stHashIterator /** k-mer size */ unsigned m_k; - /** hash values */ + /** hash values + * [seed1Hash1, seed1Hash2 ... seed3Hash1, seed3Hash2] + */ uint64_t *m_hVec; /** hash strands, forward = 0, reverse-complement = 1 */ From 66c38804771357bedc83ccd36bdc1d2752c7948b Mon Sep 17 00:00:00 2001 From: Johnathan Wong Date: Tue, 21 Jan 2020 15:10:23 -0800 Subject: [PATCH 2/2] stHashIterator.hpp: improve description --- stHashIterator.hpp | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/stHashIterator.hpp b/stHashIterator.hpp index 25f1d8f..c3c1f62 100644 --- a/stHashIterator.hpp +++ b/stHashIterator.hpp @@ -155,7 +155,8 @@ class stHashIterator unsigned m_k; /** hash values - * [seed1Hash1, seed1Hash2 ... seed3Hash1, seed3Hash2] + * For m_h = n and m_h2 = m: + * [seed1Hash1, seed1Hash2 ... seed(n)Hash(m-1), seed(n)Hash(m)] */ uint64_t *m_hVec;