From 882498b3acf9e413a77e99ebe8f0cd34ce26d306 Mon Sep 17 00:00:00 2001 From: Alan Boyle Date: Mon, 29 Apr 2019 15:10:30 -0400 Subject: [PATCH] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 8322d43..00d83b1 100644 --- a/README.md +++ b/README.md @@ -63,7 +63,7 @@ make # Usage information SEMpl runs as an iterative process and requires specific input files (need more details). The following example will build the SEM for HNF4a in HepG2 cells given the example data ``` -./iterativeSEM -PWM examples/MA0114.1.pwm -merge_file examples/wgEncodeOpenChromDnaseHepg2Pk.narrowPeak -big_wig examples/wgEncodeHaibTfbsHepg2Hnf4asc8987V0416101RawRep1.bigWig -TF_name HNF4A -output results/HNF4A +./iterativeSEM -PWM examples/MA0114.1.pwm -merge_file examples/wgEncodeOpenChromDnaseHepg2Pk.narrowPeak -big_wig examples/wgEncodeHaibTfbsHepg2Hnf4asc8987V0416101RawRep1.bigWig -TF_name HNF4A -genome data/hg19 -output results/HNF4A ``` # Testing