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RNAseq-variant-calling-nf Public
A Nextflow workflow to call variants with GATK from bulk RNAseq data
Nextflow
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star-rsem-scrnaseq-nf Public
Run STAR and RSEM on scRNAseq data demultiplexed by cell barcode
Nextflow
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cellranger-nf Public
A Nextflow wrapper for 10X Cellranger to wrangle the 10,000+ output files per sample
Nextflow 2