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blosum Created 'cmd' directory for all cablastp commands. Coarse database no… Aug 6, 2012
cmd move gc call Jun 15, 2015
data Sorting out parameters. Parameters applicable to compression should b… Jan 11, 2013
scripts Removed depending on local cmdlib library. Noah should be OK now. Oct 25, 2012
.gitignore Blast search progress. Fixed a nasty bug where the 'compressed' file … Oct 18, 2012
LICENSE added license Mar 11, 2013
Makefile psiblast and deltablast based searches implemented. Many hacks to fix. Jan 10, 2013
NR-STATS updated with latest db generation stats Jul 9, 2013
README Tell folks where to slap us. Jul 1, 2013
cablastp_test.go Fix tests and remove the last remnants of biogo. Jul 1, 2013
cmd.go Documentation. Dec 13, 2012
coarse.go Documentation. Dec 13, 2012
compressed.go More docs. Dec 13, 2012
db.go Execute makeblastdb inside the compressed DB directory. Nov 21, 2013
dbconf.go Write BLAST DB size when we get SIGQUIT. Jul 2, 2013
fasta.go Handle gzipped fasta files. Jul 1, 2013
io.go Updated to excise the biogo dependency. Jul 1, 2013
link_to_coarse.go Skipping low complexity. Bug fixes. Use uint instead of int in places… Aug 17, 2012
link_to_compressed.go Skipping low complexity. Bug fixes. Use uint instead of int in places… Aug 17, 2012
misc.go Progress on database appending. Still not quite there. Aug 7, 2012
seeds.go gofmt Dec 13, 2012
seq.go Updated to excise the biogo dependency. Jul 1, 2013
seqdiff.go More docs. Dec 13, 2012
session.vim Generate tags whenever a buffer is saved Jul 23, 2012