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Update setupINSPIIRED.R
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helixscript committed Aug 15, 2016
1 parent 4c0d7c2 commit ea12533
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions bin/setupINSPIIRED.R
Expand Up @@ -44,15 +44,15 @@ system("git clone https://github.com/BushmanLab/genomicHeatmapMaker")
system("git clone https://github.com/BushmanLab/EpigeneticHeatmapMaker")

setwd('../inputs')
system("wget http://www.bushmanlab.org/assets/doc/INSPIIRED_demoDataSet.tar")
system("wget http://www.bushmanlab.org/assets/doc/INSPIIRED/INSPIIRED_demoDataSet.tar")
system("tar xvf INSPIIRED_demoDataSet.tar")
system("rm -f INSPIIRED_demoDataSet.tar")
system("ln -s ../../INSPIIRED.yml demoDataSet/INSPIIRED.yml")

setwd("../components/genomicHeatmapMaker")

setwd("../EpigeneticHeatmapMaker")
system("wget http://www.bushmanlab.org/assets/doc/INSPIIRED_EpigeneticData.tar")
system("wget http://www.bushmanlab.org/assets/doc/INSPIIRED/INSPIIRED_EpigeneticData.tar")
system("tar xvf INSPIIRED_EpigeneticData.tar")
system("rm -f INSPIIRED_EpigeneticData.tar")

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