Skip to content
No Read Left Behind - Software for Motif Discovery from SELEX Data
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
ModelFitting
R-package
.gitignore
LICENSE
README.md

README.md

No Read Left Behind (NRLB)

This repository contains code for building and using accurate biophysical models for protein-DNA interaction. More information can be found in the following paper: Rastogi C, et al. (2018) Accurate and sensitive quantification of protein-DNA binding affinity. PNAS 115(16):E3692-E3701 (https://www.ncbi.nlm.nih.gov/pubmed/29610332).

There are two distinct components to this repository:

  • ModelFitting : commandline tools for building NRLB models (mostly intended for experts)
  • R-package/NRLBtools : user-friendly R package that contains all models discussed in Rastogi et al. (2018)
You can’t perform that action at this time.